Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d008363_circ_g.6 |
| ID in PlantcircBase | zma_circ_002674 |
| Alias | circ1251 |
| Organism | Zea mays |
| Position | chr8: 6383881-6388405 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | ei-circRNA |
| Identification method | CIRI |
| Parent gene | Zm00001d008363 |
| Parent gene annotation |
5-nucleotidase |
| Parent gene strand | - |
| Alternative splicing | Zm00001d008363_circ_g.1 Zm00001d008363_circ_g.2 Zm00001d008363_circ_g.3 Zm00001d008363_circ_g.4 Zm00001d008363_circ_g.5 Zm00001d008363_circ_g.7 Zm00001d008363_circ_g.8 Zm00001d008363_circ_g.9 |
| Support reads | 5 |
| Tissues | seedling leaves |
| Exon boundary | No-No |
| Splicing signals | CT-GA |
| Number of exons covered | Zm00001d008363_T004:5 Zm00001d008363_T007:5 Zm00001d008363_T003:5 Zm00001d008363_T005:5 Zm00001d008363_T006:3 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | osi_circ_011449 |
| PMCS | 0.041438431 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chen et al., 2017b |