Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d008363_circ_g.3 |
ID in PlantcircBase | zma_circ_009533 |
Alias | zma_circ_0002984, GRMZM2G044819_C1 |
Organism | Zea mays |
Position | chr8: 6369355-6370287 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ, CIRI2 |
Parent gene | Zm00001d008363 |
Parent gene annotation |
5-nucleotidase |
Parent gene strand | - |
Alternative splicing | Zm00001d008363_circ_g.1 Zm00001d008363_circ_g.2 Zm00001d008363_circ_g.4 Zm00001d008363_circ_g.5 Zm00001d008363_circ_g.6 Zm00001d008363_circ_g.7 Zm00001d008363_circ_g.8 Zm00001d008363_circ_g.9 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d008363_T002:4 Zm00001d008363_T001:4 Zm00001d008363_T004:3 Zm00001d008363_T006:4 Zm00001d008363_T005:4 Zm00001d008363_T007:4 Zm00001d008363_T003:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.195385472 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to drought stress |
Other Information | |
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References | Ma et al., 2021b;Zhang et al., 2019 |