CircRNA Name |
BGIOSGA036295_circ_g.2 |
ID in PlantcircBase |
osi_circ_009678 |
Alias |
Chr12:12789799_12795309(MH63RS2), Chr12:12790081_12795309(MH63RS2), Chr12:13415960_13421193(ZS97RS2), Chr12:12790081_12795309(MH63RS2) |
Organism |
Oryza sativa ssp. indica |
Position |
chr12: 10924108-10928199 JBrowse» |
Reference genome |
Oryza_indica.ASM465v1.42 |
Type |
ei-circRNA
|
Identification method |
CIRI2, CIRI2, CIRCexplorer2, CIRI2, CIRCexplorer2, CIRI2, CIRCexplorer2 |
Parent gene |
BGIOSGA036295 |
Parent gene annotation |
NA |
Parent gene strand |
- |
Alternative splicing |
BGIOSGA036295_circ_g.1 BGIOSGA036295_circ_g.3 BGIOSGA036295_circ_g.4 BGIOSGA036295_circ_g.5 BGIOSGA036295_circ_g.6 BGIOSGA036295_circ_g.7 BGIOSGA036295_circ_g.8 BGIOSGA036295_circ_g.9 BGIOSGA036295_circ_g.10 BGIOSGA036295_circ_g.11 BGIOSGA036295_circ_g.12 BGIOSGA036295_circ_g.13 BGIOSGA036295_circ_g.14 BGIOSGA036295_circ_g.15 BGIOSGA036295_circ_g.16 BGIOSGA036295_circ_g.17 |
Support reads |
NA |
Tissues |
root, leaf, panicle |
Exon boundary |
No-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
CT-NN
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
BGIOSGA036295-TA:3
|