Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os10g0457600_circ_g.1 |
ID in PlantcircBase | osa_circ_006993 |
Alias | NA |
Organism | Oryza sativa |
Position | chr10: 16776899-16777969 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os10g0457600 |
Parent gene annotation |
Similar to Acetyl-CoA C-acyltransferase (3-ketoacyl-coa thiolase b) (EC 2.3.1.16) (Fragment). (Os10t0457600-01) |
Parent gene strand | + |
Alternative splicing | Os10g0457600_circ_g.2 |
Support reads | 1 |
Tissues | shoot |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Os10t0457600-01:6 |
Conservation Information | |
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Conserved circRNAs | osi_circ_008463 |
PMCS | 0.183136508 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
16777196-16776904(+) |
Potential amino acid sequence |
MAAFYAGFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYDIGIAAGLESMTVNQVRLDGQVNP KVELFSQARDCLLPMGLTSENVAKRFGITRMEQDQAAVESHRKAAAAAASGKFKEEIVPVHTKC L*(+) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |