Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d023640_circ_g.3 |
ID in PlantcircBase | zma_circ_003108 |
Alias | circ09 |
Organism | Zea mays |
Position | chr10: 13323881-13328540 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | KNIFE |
Parent gene | Zm00001d023640 |
Parent gene annotation |
Ubiquitin carboxyl-terminal hydrolase 13 |
Parent gene strand | - |
Alternative splicing | Zm00001d023640_circ_g.1 Zm00001d023640_circ_g.2 Zm00001d023640_circ_g.4 Zm00001d023640_circ_g.5 Zm00001d023640_circ_g.6 |
Support reads | NA |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-AA |
Number of exons covered | Zm00001d023640_T033:9 Zm00001d023640_T020:9 Zm00001d023640_T022:9 Zm00001d023640_T043:9 Zm00001d023640_T006:9 Zm00001d023640_T012:8 Zm00001d023640_T009:9 Zm00001d023640_T004:9 Zm00001d023640_T007:9 Zm00001d023640_T024:8 Zm00001d023640_T013:8 Zm00001d023640_T011:9 Zm00001d023640_T005:9 Zm00001d023640_T017:9 Zm00001d023640_T002:9 Zm00001d023640_T015:8 Zm00001d023640_T019:9 Zm00001d023640_T044:9 Zm00001d023640_T034:9 Zm00001d023640_T003:9 Zm00001d023640_T021:9 Zm00001d023640_T018:9 Zm00001d023640_T014:9 Zm00001d023640_T001:9 Zm00001d023640_T008:8 Zm00001d023640_T032:9 Zm00001d023640_T010:9 Zm00001d023640_T023:3 Zm00001d023640_T042:9 Zm00001d023640_T016:9 Zm00001d023640_T028:9 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.01474095 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |