Plant Circular RNA Database

Detail information of Os07g0658400_circ_g.34

			
						 General Information
					
						CircRNA Name
						Os07g0658400_circ_g.34
					
						ID in PlantcircBase
						osa_circ_035136
					
						Alias
						Os_ciR11164
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 27732943-27737143  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os07g0658400						
					
						Parent gene annotation
						
							Ferredoxin-dependent glutamate synthase, Leaf senescence and nit
rogen remobilization (Os07t0658400-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os07g0658400_circ_g.13 Os07g0658400_circ_g.14 Os07g0658400_circ_g.15 Os07g0658400_circ_g.16 Os07g0658400_circ_g.17 Os07g0658400_circ_g.18 Os07g0658400_circ_g.19 Os07g0658400_circ_g.20 Os07g0658400_circ_g.21 Os07g0658400_circ_g.22 Os07g0658400_circ_g.23 Os07g0658400_circ_g.24 Os07g0658400_circ_g.25 Os07g0658400_circ_g.26 Os07g0658400_circ_g.27 Os07g0658400_circ_g.28 Os07g0658400_circ_g.29 Os07g0658400_circ_g.30 Os07g0658400_circ_g.31 Os07g0658400_circ_g.32 Os07g0658400_circ_g.33 Os07g0658400_circ_g.35 Os07g0658400_circ_g.36 Os07g0658400_circ_g.37 Os07g0658400_circ_g.38 Os07g0658400_circ_g.39 						
					
						Support reads
						2/1
					
						Tissues
						root/shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0658400-02:8

General Information
CircRNA Name	Os07g0658400_circ_g.34
ID in PlantcircBase	osa_circ_035136
Alias	Os_ciR11164
Organism	Oryza sativa
Position	chr7: 27732943-27737143 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os07g0658400
Parent gene annotation	Ferredoxin-dependent glutamate synthase, Leaf senescence and nit rogen remobilization (Os07t0658400-02)
Parent gene strand	-
Alternative splicing	Os07g0658400_circ_g.13 Os07g0658400_circ_g.14 Os07g0658400_circ_g.15 Os07g0658400_circ_g.16 Os07g0658400_circ_g.17 Os07g0658400_circ_g.18 Os07g0658400_circ_g.19 Os07g0658400_circ_g.20 Os07g0658400_circ_g.21 Os07g0658400_circ_g.22 Os07g0658400_circ_g.23 Os07g0658400_circ_g.24 Os07g0658400_circ_g.25 Os07g0658400_circ_g.26 Os07g0658400_circ_g.27 Os07g0658400_circ_g.28 Os07g0658400_circ_g.29 Os07g0658400_circ_g.30 Os07g0658400_circ_g.31 Os07g0658400_circ_g.32 Os07g0658400_circ_g.33 Os07g0658400_circ_g.35 Os07g0658400_circ_g.36 Os07g0658400_circ_g.37 Os07g0658400_circ_g.38 Os07g0658400_circ_g.39
Support reads	2/1
Tissues	root/shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0658400-02:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATCCCGGACAATATTGAATGAAGGCTCATTTTTCAAGTTTGCGACAAATCCAACACCACAAGC
ACCACGTTCTGATAAGATTTCATTCAAATCTGCAGCtgctggtgtctcaagaccgtttcattgt
ccatagcaacagatgactggaagttgacaggctttattgaacgtgtactttgctgcaaccagga
tccatagg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1394
Transcript exons: 27732943-27733088,27733182-27733274,27734189-27734285,27
734803-27734873,27734986-27735084,27735616-27735747,2773
5866-27736308,27736831-27737143
TGCTGGTGTCTCAAGACCGTTTCATTGTCCATAGCAACAGATGACTGGAAGTTGACAGGCTTTA
TTGAACGTGTACTTTGCTGCAACCAGGATCCATAGGGGTTCGCTGAAGCCACACTTTTCTTCAC
TTCTGTGTTTTCAAGCACCTGGCCAGTTTGTAGGTCAACCGTTATCATCATTCCAGGACCCAAT
CTTCCTTTCATTACTACCTTTGACTCATCCATTGGTATAACACCAACCTCAGATGCAACATAAA
CAAAATCATCAGATGTTCTCCAATAGCGTGCTGGGCGGAGACCATTTCGATCAAGACATGCTCC
TACTGTCCTTCCATCACTAAATAAGAGCAAAGCAGGTCCATCCCAAGCCTCCATTTGACCTTTA
TAGTAGTCATAGAAGTCGATTACCTCAGGATATTTTATTGACAATGTAGGATGGTTCTTGTATG
CCTCAGGAACGAGAATCATCATAGCTTCAGCAGGACTTCTGCCACTTCTTAGCAGTAATTCAGC
AGTACTGTCAAGGTTTGCTGAATCAGATGCTTTAGGATCACCAAATGGACGTATTTCATGCTCA
CGCCCACGCCATACAGGAGATTGTAGTGTGGCTTCCCTTGATCGCATCCAGTTCAAGTTCCCCT
GTATTGTATTAATCTCTCCATTGTGTCCAAGTAACCTCATAGGTTGAGCAAGAGGCCATCTAGG
GCTTGTATTGGTACTGTATCTTCGATGGTATATGGCAAAAGGTGATTTGTAGAGTTCATTCTGA
AGGTCCAAATAGAATTGCCCAAGAATCTCAGATCGAAGCATCCCCTTGTAGACTATAGTTCTGC
TTGACAAAGAACAGAAATAAAGTTCATCTGCCCAACTAGCAGATTTTGTGGCCCGCTCTATCAG
CTTCCGGCAGATGTACAACTCTCTCTCTATGTCATCAGCATTATCTTCTTTTGCAACTTTCACA
AATATCTGTTGTATATTAGGCATGGTTTCTTTTGCATAGCGACCTACCACTGATACATTAAAAG
GAACAGTTCTCCAGCCAAGAACCTCAAGGCCTTCGTCAGTGAATACCTTGGCAACAACAGCTTT
GGCTTCTTCCATAGAATTCTCGTCTTGTGGAAGAAAGACCATTCCGACACCTGTATTTGTTCTG
TCCAGGGGAGCAAGCCCTTGCTTGTTGGCCCAGTCATTGAACAAGTCCCATGGGATACCACTCA
TCAGTCCTGAACCGTCACCGGAGTCATTGTCCGCTCCACACCCACCACGGTGCTCCATGCAGCC
AAGAGCCACAAGGGCATCCCGGACAATATTGAATGAAGGCTCATTTTTCAAGTTTGCGACAAAT
CCAACACCACAAGCACCACGTTCTGATAAGATTTCATTCAAATCTGCAGC
						
					

						Genomic sequence
						
							TGCTGGTGTCTCAAGACCGTTTCATTGTCCATAGCAACAGATGACTGGAAGTTGACAGGCTTTA
TTGAACGTGTACTTTGCTGCAACCAGGATCCATAGGGGTTCGCTGAAGCCACACTTTTCTTCAC
TTCTGTGTTTTCAAGCACCTAAGATGATTCATGAGGTTTAGCACATATATTTGAATTGTCTGGA
ATACTCAAAGCAAGAAAGGAAAATGGTTATTTCATTTCTATTCTAACCTGGCCAGTTTGTAGGT
CAACCGTTATCATCATTCCAGGACCCAATCTTCCTTTCATTACTACCTTTGACTCATCCATTGG
TATAACACCAACCTGTAGATTGTCATAAAAAAAAAAGCTAGTGATCAGTAAGAACCATACAATA
TAGAACTTTGGGGACTCCCACAGGGCATTTAAGAAAGTGATCCAAAGTAACTCCATCAAGTGTT
GCAGTATGGTGGCACAAGGTTAATATTTTATTGTCATGATTTTAAATATAATATATCGCATTTC
AACTGCTCAAAAGATAGTAAAAAATAGGGTAATAGAGTATGAATTGCCATCCAAAGAGTCGAAC
ATGATTTGGACTTAGCAAACTTAAGCATAAGTTGACTTAACAATTTCATGAAGCAACTCGTCTA
TCAAGAGCAGCAGTGATCATCTACGTAAACCAATTCTTCAAATTATGCATCCAGTAAGCCGTAA
TTAAATGCTCAATGGTGTATGCAATACTATATAAAAAGCTGCCGGTATAAGGAAGGTGTGAGGG
AAGCTTCTTTAAGACAGAGGAAAGGAAGAATAGCATGGCATCCATGTACCCTGCAAATGCTATT
TACTTCACTACAATTGAGGTACTGTGCATTTACTCTGCCAACTTAATTGCCATGTGGTATCATT
ATAGGATGATACCACACATGCATGGGCATAAAACATAACATCCTAATAGGAACGAAAACACTAA
CTTCGTAATTTTCTCCTAATCACCTGTTGTAGATGTCAGACCTACACTTTAGCAAATGGACACA
ATACTTACTCAATGATATCTGAACTCTGCGGTTTGGTATAGAAGGGTGTCAGTATATCTGCAAT
AAGTTATTGGCAGATAAACCAAATGCTCCAATTCAAGAATTTCAAAATGGAGATTTCACTATAC
ATGAGAATATCAATGTTTCTCTCTAATAACATTGTCACCGAACAATCAATTCTATACAGAAGAA
TAAAATTACCAGAACATCAAAAGGGCATACCTCAGATGCAACATAAACAAAATCATCAGATGTT
CTCCAATAGCGTGCTGGGCGGAGACCATTTCGATCAAGACATGCTCCTACTGTCCTTCCATCAC
TGCACGCAAGAATATACCAAATCGAACTTGTAAGCAGTGTCAATTCTGTTGCAGGATGCTCTAA
ATTGGAGAAGTATTGGAATATCTTATTCATGAAAACAGAAAGCATCCTCTATCATGGGGACTAG
TTCAGCAATATTTCAGTTCAGCAATATTTCATTATTATTTTAATATATGTTGTTATTTTGCATA
TATCAGTTTTGTCTCCTATATGGAATTTTATTGCTGTACCATGCTTCAATAGGTTTCTACAGCT
ACACTTAGATATCGTTTGCCAATACTTCTAATGACAGCATGTAGCCTTCTCTTATGATTTTATC
TTTCACAATAAATAGCTACTTGGTGCATCCTTATTTCTTGAATCAAGGTATATAAATTAGAAGG
AAGTCAAATCTGCTGATGCATGAGATGCCTTTGACCAAACTGTGCAAGAAAACTGTGCCTACAC
ATCATGAACTGACATAGCAAAAGAAAATAAATTAAATACCTAACAGATTAACACAAAAATGATT
TTACCTAAATAAGAGCAAAGCAGGTCCATCCCAAGCCTCCATTTGACCTTTATAGTAGTCATAG
AAGTCGATTACCTAATGCACAAATGAAGAGAACATTCACTTGAACAGAACTGCTTGCACTAGTT
AATATGTGAGGAATTTGATGCATACCCATGGCTTCTATATATACTAACGCATTCCATACCTCAG
GATATTTTATTGACAATGTAGGATGGTTCTTGTATGCCTCAGGAACGAGAATCATCATAGCTTC
AGCAGGACTTCTGCCACTTCTTAGCAGTAACTGGTGCAAGAAAGAATTTGATGATTTAATAATA
ACAGCAGTTTTGCAACAACTTTTAATGCATTGAAGAAGAGAGCAGGGTGTGTGATGCACATTCA
GATTAATATATATAAATGATAATGCACATTGAAATAGATCGAGTAAAAATCATGTTGCTTAGCA
ACTAGCAGTAACTTGCAACTTTATAACATTTAGAAGTACAACTTCATTCTCCACATCTCAAAAG
CATTAATTCAAAGTATCATAGGATGTTTGTACATGCTGTGCATCTTTCAATTGTTTCAAAAACT
TTGAACTGGCCTTTTTCGTCAGATTTCTGTATTTTACTTCTCAATTGTTATCAAAATGTTAACA
TCCTACAGCTGCTAGACAAATTATGTGTTGTTAAGCAAATTCACCAAAGGAATTTTGAACGGTC
AAGGAGTGCCCCAAAAAACTGGCTCTAGAATTATTACAAAAAAGAAAGCAAAATTATGTTAATT
GTGTGGACAAGAAGCATAAGTAATGGATGCTCCATGTGCAGTCTCTTACTTCAGCAGTACTGTC
AAGGTTTGCTGAATCAGATGCTTTAGGATCACCAAATGGACGTATTTCATGCTCACGCCCACGC
CATACAGGAGATTGTAGTGTGGCTTCCCTTGATCGCATCCAGTTCAAGTTCCCCTGCAAGGAAA
GGATAGACTATGAATACACTTGAGGTATGTTTAATCTTCAATAACACACTTTTGCTAAACATCA
GATACAGCGAACAAATAGAAGAATTATAGATTCAGGAACAAACCTGTATTGTATTAATCTCTCC
ATTGTGTCCAAGTAACCTCATAGGTTGAGCAAGAGGCCATCTAGGGCTTGTATTGGTACTGTAT
CTTCGATGGTATATGGCAAAAGGTGATTTGTAGAGTTCATTCTGAAGGTCCAAATAGAATTGCC
CAAGAATCTCAGATCGAAGCATCCCCTTGTAGACTATAGTTCTGCTTGACAAAGAACAGAAATA
AAGTTCATCTGCCCAACTAGCAGATTTTGTGGCCCGCTCTATCAGCTTCCGGCAGATGTACAAC
TCTCTCTCTATGTCATCAGCATTATCTTCTTTTGCAACTTTCACAAATATCTGTTGTATATTAG
GCATGGTTTCTTTTGCATAGCGACCTACCACTGATACATTAAAAGGAACAGTTCTCCAGCCAAG
AACCTCAAGGCCTTCGTCAGTGAATACCTTGGCAACAACTGAAAAGGCAACATGGTGACATTCA
GATCATGCATGACAATGGTACGAAACCAACATGGTAACTGCTGGCTACCAACCATAAGAATGTA
TTTTTTTAAAAAAAAAATAGAAAACAGGATATGGTACTTAACCACCATATCCATTTTCACTTGT
GAAGCAGATGTCATTGTGAGTTTTATAAAATAATTGTCCCTTTGAAGGGATGAAAATTTTAGCA
CACAAGAAACTGAAAATGCATTTGTTATAGGTTATAGTTGTAGATACAAATAAATGATATTTAC
TTTCTAAAATTTCATGCAAGGGATAATAGTGAGTCAGAAAAGGGTCAAGGTGTCATGGGATATG
AAGTATGGCAGCATGAAAACTCCCAAATAAAACATACCGAAACAGGTGGCAACAAGATATGCAT
TGCGAACATAAATGTTATGATCCATACGAACACAGGAAATATTGCACTTTGAAAGCAAGAAATG
CTCGGTAATGTGGGCAGAAAATTGAGGTAAGCATAAGAAACACTCTACCAGCTTTGGCTTCTTC
CATAGAATTCTCGTCTTGTGGAAGAAAGACCATTCCGACACCTGTATTTGTTCTGTCCAGGGGA
GCAAGCCCTTGCTTGTTGGCCCAGTCATTGAACAAGTCCCATGGGATACCACTCATCAGTCCTG
AACCGTCACCGGAGTCATTGTCCGCTCCACACCCACCACGGTGCTCCATGCAGCCAAGAGCCAC
AAGGGCATCCCGGACAATATTGAATGAAGGCTCATTTTTCAAGTTTGCGACAAATCCAACACCA
CAAGCACCACGTTCTGATAAGATTTCATTCAAATCTGCAGC
						
					

			
		

Sequences
Splice junction sequence	CATCCCGGACAATATTGAATGAAGGCTCATTTTTCAAGTTTGCGACAAATCCAACACCACAAGC ACCACGTTCTGATAAGATTTCATTCAAATCTGCAGCtgctggtgtctcaagaccgtttcattgt ccatagcaacagatgactggaagttgacaggctttattgaacgtgtactttgctgcaaccagga tccatagg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1394 Transcript exons: 27732943-27733088,27733182-27733274,27734189-27734285,27 734803-27734873,27734986-27735084,27735616-27735747,2773 5866-27736308,27736831-27737143 TGCTGGTGTCTCAAGACCGTTTCATTGTCCATAGCAACAGATGACTGGAAGTTGACAGGCTTTA TTGAACGTGTACTTTGCTGCAACCAGGATCCATAGGGGTTCGCTGAAGCCACACTTTTCTTCAC TTCTGTGTTTTCAAGCACCTGGCCAGTTTGTAGGTCAACCGTTATCATCATTCCAGGACCCAAT CTTCCTTTCATTACTACCTTTGACTCATCCATTGGTATAACACCAACCTCAGATGCAACATAAA CAAAATCATCAGATGTTCTCCAATAGCGTGCTGGGCGGAGACCATTTCGATCAAGACATGCTCC TACTGTCCTTCCATCACTAAATAAGAGCAAAGCAGGTCCATCCCAAGCCTCCATTTGACCTTTA TAGTAGTCATAGAAGTCGATTACCTCAGGATATTTTATTGACAATGTAGGATGGTTCTTGTATG CCTCAGGAACGAGAATCATCATAGCTTCAGCAGGACTTCTGCCACTTCTTAGCAGTAATTCAGC AGTACTGTCAAGGTTTGCTGAATCAGATGCTTTAGGATCACCAAATGGACGTATTTCATGCTCA CGCCCACGCCATACAGGAGATTGTAGTGTGGCTTCCCTTGATCGCATCCAGTTCAAGTTCCCCT GTATTGTATTAATCTCTCCATTGTGTCCAAGTAACCTCATAGGTTGAGCAAGAGGCCATCTAGG GCTTGTATTGGTACTGTATCTTCGATGGTATATGGCAAAAGGTGATTTGTAGAGTTCATTCTGA AGGTCCAAATAGAATTGCCCAAGAATCTCAGATCGAAGCATCCCCTTGTAGACTATAGTTCTGC TTGACAAAGAACAGAAATAAAGTTCATCTGCCCAACTAGCAGATTTTGTGGCCCGCTCTATCAG CTTCCGGCAGATGTACAACTCTCTCTCTATGTCATCAGCATTATCTTCTTTTGCAACTTTCACA AATATCTGTTGTATATTAGGCATGGTTTCTTTTGCATAGCGACCTACCACTGATACATTAAAAG GAACAGTTCTCCAGCCAAGAACCTCAAGGCCTTCGTCAGTGAATACCTTGGCAACAACAGCTTT GGCTTCTTCCATAGAATTCTCGTCTTGTGGAAGAAAGACCATTCCGACACCTGTATTTGTTCTG TCCAGGGGAGCAAGCCCTTGCTTGTTGGCCCAGTCATTGAACAAGTCCCATGGGATACCACTCA TCAGTCCTGAACCGTCACCGGAGTCATTGTCCGCTCCACACCCACCACGGTGCTCCATGCAGCC AAGAGCCACAAGGGCATCCCGGACAATATTGAATGAAGGCTCATTTTTCAAGTTTGCGACAAAT CCAACACCACAAGCACCACGTTCTGATAAGATTTCATTCAAATCTGCAGC
Genomic sequence	TGCTGGTGTCTCAAGACCGTTTCATTGTCCATAGCAACAGATGACTGGAAGTTGACAGGCTTTA TTGAACGTGTACTTTGCTGCAACCAGGATCCATAGGGGTTCGCTGAAGCCACACTTTTCTTCAC TTCTGTGTTTTCAAGCACCTAAGATGATTCATGAGGTTTAGCACATATATTTGAATTGTCTGGA ATACTCAAAGCAAGAAAGGAAAATGGTTATTTCATTTCTATTCTAACCTGGCCAGTTTGTAGGT CAACCGTTATCATCATTCCAGGACCCAATCTTCCTTTCATTACTACCTTTGACTCATCCATTGG TATAACACCAACCTGTAGATTGTCATAAAAAAAAAAGCTAGTGATCAGTAAGAACCATACAATA TAGAACTTTGGGGACTCCCACAGGGCATTTAAGAAAGTGATCCAAAGTAACTCCATCAAGTGTT GCAGTATGGTGGCACAAGGTTAATATTTTATTGTCATGATTTTAAATATAATATATCGCATTTC AACTGCTCAAAAGATAGTAAAAAATAGGGTAATAGAGTATGAATTGCCATCCAAAGAGTCGAAC ATGATTTGGACTTAGCAAACTTAAGCATAAGTTGACTTAACAATTTCATGAAGCAACTCGTCTA TCAAGAGCAGCAGTGATCATCTACGTAAACCAATTCTTCAAATTATGCATCCAGTAAGCCGTAA TTAAATGCTCAATGGTGTATGCAATACTATATAAAAAGCTGCCGGTATAAGGAAGGTGTGAGGG AAGCTTCTTTAAGACAGAGGAAAGGAAGAATAGCATGGCATCCATGTACCCTGCAAATGCTATT TACTTCACTACAATTGAGGTACTGTGCATTTACTCTGCCAACTTAATTGCCATGTGGTATCATT ATAGGATGATACCACACATGCATGGGCATAAAACATAACATCCTAATAGGAACGAAAACACTAA CTTCGTAATTTTCTCCTAATCACCTGTTGTAGATGTCAGACCTACACTTTAGCAAATGGACACA ATACTTACTCAATGATATCTGAACTCTGCGGTTTGGTATAGAAGGGTGTCAGTATATCTGCAAT AAGTTATTGGCAGATAAACCAAATGCTCCAATTCAAGAATTTCAAAATGGAGATTTCACTATAC ATGAGAATATCAATGTTTCTCTCTAATAACATTGTCACCGAACAATCAATTCTATACAGAAGAA TAAAATTACCAGAACATCAAAAGGGCATACCTCAGATGCAACATAAACAAAATCATCAGATGTT CTCCAATAGCGTGCTGGGCGGAGACCATTTCGATCAAGACATGCTCCTACTGTCCTTCCATCAC TGCACGCAAGAATATACCAAATCGAACTTGTAAGCAGTGTCAATTCTGTTGCAGGATGCTCTAA ATTGGAGAAGTATTGGAATATCTTATTCATGAAAACAGAAAGCATCCTCTATCATGGGGACTAG TTCAGCAATATTTCAGTTCAGCAATATTTCATTATTATTTTAATATATGTTGTTATTTTGCATA TATCAGTTTTGTCTCCTATATGGAATTTTATTGCTGTACCATGCTTCAATAGGTTTCTACAGCT ACACTTAGATATCGTTTGCCAATACTTCTAATGACAGCATGTAGCCTTCTCTTATGATTTTATC TTTCACAATAAATAGCTACTTGGTGCATCCTTATTTCTTGAATCAAGGTATATAAATTAGAAGG AAGTCAAATCTGCTGATGCATGAGATGCCTTTGACCAAACTGTGCAAGAAAACTGTGCCTACAC ATCATGAACTGACATAGCAAAAGAAAATAAATTAAATACCTAACAGATTAACACAAAAATGATT TTACCTAAATAAGAGCAAAGCAGGTCCATCCCAAGCCTCCATTTGACCTTTATAGTAGTCATAG AAGTCGATTACCTAATGCACAAATGAAGAGAACATTCACTTGAACAGAACTGCTTGCACTAGTT AATATGTGAGGAATTTGATGCATACCCATGGCTTCTATATATACTAACGCATTCCATACCTCAG GATATTTTATTGACAATGTAGGATGGTTCTTGTATGCCTCAGGAACGAGAATCATCATAGCTTC AGCAGGACTTCTGCCACTTCTTAGCAGTAACTGGTGCAAGAAAGAATTTGATGATTTAATAATA ACAGCAGTTTTGCAACAACTTTTAATGCATTGAAGAAGAGAGCAGGGTGTGTGATGCACATTCA GATTAATATATATAAATGATAATGCACATTGAAATAGATCGAGTAAAAATCATGTTGCTTAGCA ACTAGCAGTAACTTGCAACTTTATAACATTTAGAAGTACAACTTCATTCTCCACATCTCAAAAG CATTAATTCAAAGTATCATAGGATGTTTGTACATGCTGTGCATCTTTCAATTGTTTCAAAAACT TTGAACTGGCCTTTTTCGTCAGATTTCTGTATTTTACTTCTCAATTGTTATCAAAATGTTAACA TCCTACAGCTGCTAGACAAATTATGTGTTGTTAAGCAAATTCACCAAAGGAATTTTGAACGGTC AAGGAGTGCCCCAAAAAACTGGCTCTAGAATTATTACAAAAAAGAAAGCAAAATTATGTTAATT GTGTGGACAAGAAGCATAAGTAATGGATGCTCCATGTGCAGTCTCTTACTTCAGCAGTACTGTC AAGGTTTGCTGAATCAGATGCTTTAGGATCACCAAATGGACGTATTTCATGCTCACGCCCACGC CATACAGGAGATTGTAGTGTGGCTTCCCTTGATCGCATCCAGTTCAAGTTCCCCTGCAAGGAAA GGATAGACTATGAATACACTTGAGGTATGTTTAATCTTCAATAACACACTTTTGCTAAACATCA GATACAGCGAACAAATAGAAGAATTATAGATTCAGGAACAAACCTGTATTGTATTAATCTCTCC ATTGTGTCCAAGTAACCTCATAGGTTGAGCAAGAGGCCATCTAGGGCTTGTATTGGTACTGTAT CTTCGATGGTATATGGCAAAAGGTGATTTGTAGAGTTCATTCTGAAGGTCCAAATAGAATTGCC CAAGAATCTCAGATCGAAGCATCCCCTTGTAGACTATAGTTCTGCTTGACAAAGAACAGAAATA AAGTTCATCTGCCCAACTAGCAGATTTTGTGGCCCGCTCTATCAGCTTCCGGCAGATGTACAAC TCTCTCTCTATGTCATCAGCATTATCTTCTTTTGCAACTTTCACAAATATCTGTTGTATATTAG GCATGGTTTCTTTTGCATAGCGACCTACCACTGATACATTAAAAGGAACAGTTCTCCAGCCAAG AACCTCAAGGCCTTCGTCAGTGAATACCTTGGCAACAACTGAAAAGGCAACATGGTGACATTCA GATCATGCATGACAATGGTACGAAACCAACATGGTAACTGCTGGCTACCAACCATAAGAATGTA TTTTTTTAAAAAAAAAATAGAAAACAGGATATGGTACTTAACCACCATATCCATTTTCACTTGT GAAGCAGATGTCATTGTGAGTTTTATAAAATAATTGTCCCTTTGAAGGGATGAAAATTTTAGCA CACAAGAAACTGAAAATGCATTTGTTATAGGTTATAGTTGTAGATACAAATAAATGATATTTAC TTTCTAAAATTTCATGCAAGGGATAATAGTGAGTCAGAAAAGGGTCAAGGTGTCATGGGATATG AAGTATGGCAGCATGAAAACTCCCAAATAAAACATACCGAAACAGGTGGCAACAAGATATGCAT TGCGAACATAAATGTTATGATCCATACGAACACAGGAAATATTGCACTTTGAAAGCAAGAAATG CTCGGTAATGTGGGCAGAAAATTGAGGTAAGCATAAGAAACACTCTACCAGCTTTGGCTTCTTC CATAGAATTCTCGTCTTGTGGAAGAAAGACCATTCCGACACCTGTATTTGTTCTGTCCAGGGGA GCAAGCCCTTGCTTGTTGGCCCAGTCATTGAACAAGTCCCATGGGATACCACTCATCAGTCCTG AACCGTCACCGGAGTCATTGTCCGCTCCACACCCACCACGGTGCTCCATGCAGCCAAGAGCCAC AAGGGCATCCCGGACAATATTGAATGAAGGCTCATTTTTCAAGTTTGCGACAAATCCAACACCA CAAGCACCACGTTCTGATAAGATTTCATTCAAATCTGCAGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.337512841

Conservation Information
Conserved circRNAs	NA
PMCS	0.337512841

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							27737023-27732973(+)
27737063-27732983(+)
27737025-27737133(-)
						
						Potential amino acid sequence
						
							MQPRATRASRTILNEGSFFKFATNPTPQAPRSDKISFKSAAAGVSRPFHCP*(+)
MKAHFSSLRQIQHHKHHVLIRFHSNLQLLVSQDRFIVHSNR*(+)
MEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEEAKA
VVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICRKLI
ERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSPFAIYHRRYSTNTSPR
WPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDSTAE
LLLRSGRSPAEAMMILVPEAYKNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRTVGA
CLDRNGLRPARYWRTSDDFVYVASEVGVIPMDESKVVMKGRLGPGMMITVDLQTGQVLENTEVK
KSVASANPYGSWLQQSTRSIKPVNFQSSVAMDNETVLRHQQLQI*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	27737023-27732973(+) 27737063-27732983(+) 27737025-27737133(-)
Potential amino acid sequence	MQPRATRASRTILNEGSFFKFATNPTPQAPRSDKISFKSAAAGVSRPFHCP(+) MKAHFSSLRQIQHHKHHVLIRFHSNLQLLVSQDRFIVHSNR(+) MEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEEAKA VVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICRKLI ERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSPFAIYHRRYSTNTSPR WPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDSTAE LLLRSGRSPAEAMMILVPEAYKNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRTVGA CLDRNGLRPARYWRTSDDFVYVASEVGVIPMDESKVVMKGRLGPGMMITVDLQTGQVLENTEVK KSVASANPYGSWLQQSTRSIKPVNFQSSVAMDNETVLRHQQLQI*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os07g0658400_circ_g.34

Address

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