Plant Circular RNA Database

Detail information of Os07g0658400_circ_g.36

			
						 General Information
					
						CircRNA Name
						Os07g0658400_circ_g.36
					
						ID in PlantcircBase
						osa_circ_035138
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 27734189-27737143  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os07g0658400						
					
						Parent gene annotation
						
							Ferredoxin-dependent glutamate synthase, Leaf senescence and nit
rogen remobilization (Os07t0658400-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os07g0658400_circ_g.13 Os07g0658400_circ_g.14 Os07g0658400_circ_g.15 Os07g0658400_circ_g.16 Os07g0658400_circ_g.17 Os07g0658400_circ_g.18 Os07g0658400_circ_g.19 Os07g0658400_circ_g.20 Os07g0658400_circ_g.21 Os07g0658400_circ_g.22 Os07g0658400_circ_g.23 Os07g0658400_circ_g.24 Os07g0658400_circ_g.25 Os07g0658400_circ_g.26 Os07g0658400_circ_g.27 Os07g0658400_circ_g.28 Os07g0658400_circ_g.29 Os07g0658400_circ_g.30 Os07g0658400_circ_g.31 Os07g0658400_circ_g.32 Os07g0658400_circ_g.33 Os07g0658400_circ_g.34 Os07g0658400_circ_g.35 Os07g0658400_circ_g.37 Os07g0658400_circ_g.38 Os07g0658400_circ_g.39 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0658400-02:6

General Information
CircRNA Name	Os07g0658400_circ_g.36
ID in PlantcircBase	osa_circ_035138
Alias	NA
Organism	Oryza sativa
Position	chr7: 27734189-27737143 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os07g0658400
Parent gene annotation	Ferredoxin-dependent glutamate synthase, Leaf senescence and nit rogen remobilization (Os07t0658400-02)
Parent gene strand	-
Alternative splicing	Os07g0658400_circ_g.13 Os07g0658400_circ_g.14 Os07g0658400_circ_g.15 Os07g0658400_circ_g.16 Os07g0658400_circ_g.17 Os07g0658400_circ_g.18 Os07g0658400_circ_g.19 Os07g0658400_circ_g.20 Os07g0658400_circ_g.21 Os07g0658400_circ_g.22 Os07g0658400_circ_g.23 Os07g0658400_circ_g.24 Os07g0658400_circ_g.25 Os07g0658400_circ_g.26 Os07g0658400_circ_g.27 Os07g0658400_circ_g.28 Os07g0658400_circ_g.29 Os07g0658400_circ_g.30 Os07g0658400_circ_g.31 Os07g0658400_circ_g.32 Os07g0658400_circ_g.33 Os07g0658400_circ_g.34 Os07g0658400_circ_g.35 Os07g0658400_circ_g.37 Os07g0658400_circ_g.38 Os07g0658400_circ_g.39
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0658400-02:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATCCCGGACAATATTGAATGAAGGCTCATTTTTCAAGTTTGCGACAAATCCAACACCACAAGC
ACCACGTTCTGATAAGATTTCATTCAAATCTGCAGCctcagatgcaacataaacaaaatcatca
gatgttctccaatagcgtgctgggcggagaccatttcgatcaagacatgctcctactgtccttc
catcactg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1155
Transcript exons: 27734189-27734285,27734803-27734873,27734986-27735084,27
735616-27735747,27735866-27736308,27736831-27737143
CTCAGATGCAACATAAACAAAATCATCAGATGTTCTCCAATAGCGTGCTGGGCGGAGACCATTT
CGATCAAGACATGCTCCTACTGTCCTTCCATCACTAAATAAGAGCAAAGCAGGTCCATCCCAAG
CCTCCATTTGACCTTTATAGTAGTCATAGAAGTCGATTACCTCAGGATATTTTATTGACAATGT
AGGATGGTTCTTGTATGCCTCAGGAACGAGAATCATCATAGCTTCAGCAGGACTTCTGCCACTT
CTTAGCAGTAATTCAGCAGTACTGTCAAGGTTTGCTGAATCAGATGCTTTAGGATCACCAAATG
GACGTATTTCATGCTCACGCCCACGCCATACAGGAGATTGTAGTGTGGCTTCCCTTGATCGCAT
CCAGTTCAAGTTCCCCTGTATTGTATTAATCTCTCCATTGTGTCCAAGTAACCTCATAGGTTGA
GCAAGAGGCCATCTAGGGCTTGTATTGGTACTGTATCTTCGATGGTATATGGCAAAAGGTGATT
TGTAGAGTTCATTCTGAAGGTCCAAATAGAATTGCCCAAGAATCTCAGATCGAAGCATCCCCTT
GTAGACTATAGTTCTGCTTGACAAAGAACAGAAATAAAGTTCATCTGCCCAACTAGCAGATTTT
GTGGCCCGCTCTATCAGCTTCCGGCAGATGTACAACTCTCTCTCTATGTCATCAGCATTATCTT
CTTTTGCAACTTTCACAAATATCTGTTGTATATTAGGCATGGTTTCTTTTGCATAGCGACCTAC
CACTGATACATTAAAAGGAACAGTTCTCCAGCCAAGAACCTCAAGGCCTTCGTCAGTGAATACC
TTGGCAACAACAGCTTTGGCTTCTTCCATAGAATTCTCGTCTTGTGGAAGAAAGACCATTCCGA
CACCTGTATTTGTTCTGTCCAGGGGAGCAAGCCCTTGCTTGTTGGCCCAGTCATTGAACAAGTC
CCATGGGATACCACTCATCAGTCCTGAACCGTCACCGGAGTCATTGTCCGCTCCACACCCACCA
CGGTGCTCCATGCAGCCAAGAGCCACAAGGGCATCCCGGACAATATTGAATGAAGGCTCATTTT
TCAAGTTTGCGACAAATCCAACACCACAAGCACCACGTTCTGATAAGATTTCATTCAAATCTGC
AGC
						
					

						Genomic sequence
						
							CTCAGATGCAACATAAACAAAATCATCAGATGTTCTCCAATAGCGTGCTGGGCGGAGACCATTT
CGATCAAGACATGCTCCTACTGTCCTTCCATCACTGCACGCAAGAATATACCAAATCGAACTTG
TAAGCAGTGTCAATTCTGTTGCAGGATGCTCTAAATTGGAGAAGTATTGGAATATCTTATTCAT
GAAAACAGAAAGCATCCTCTATCATGGGGACTAGTTCAGCAATATTTCAGTTCAGCAATATTTC
ATTATTATTTTAATATATGTTGTTATTTTGCATATATCAGTTTTGTCTCCTATATGGAATTTTA
TTGCTGTACCATGCTTCAATAGGTTTCTACAGCTACACTTAGATATCGTTTGCCAATACTTCTA
ATGACAGCATGTAGCCTTCTCTTATGATTTTATCTTTCACAATAAATAGCTACTTGGTGCATCC
TTATTTCTTGAATCAAGGTATATAAATTAGAAGGAAGTCAAATCTGCTGATGCATGAGATGCCT
TTGACCAAACTGTGCAAGAAAACTGTGCCTACACATCATGAACTGACATAGCAAAAGAAAATAA
ATTAAATACCTAACAGATTAACACAAAAATGATTTTACCTAAATAAGAGCAAAGCAGGTCCATC
CCAAGCCTCCATTTGACCTTTATAGTAGTCATAGAAGTCGATTACCTAATGCACAAATGAAGAG
AACATTCACTTGAACAGAACTGCTTGCACTAGTTAATATGTGAGGAATTTGATGCATACCCATG
GCTTCTATATATACTAACGCATTCCATACCTCAGGATATTTTATTGACAATGTAGGATGGTTCT
TGTATGCCTCAGGAACGAGAATCATCATAGCTTCAGCAGGACTTCTGCCACTTCTTAGCAGTAA
CTGGTGCAAGAAAGAATTTGATGATTTAATAATAACAGCAGTTTTGCAACAACTTTTAATGCAT
TGAAGAAGAGAGCAGGGTGTGTGATGCACATTCAGATTAATATATATAAATGATAATGCACATT
GAAATAGATCGAGTAAAAATCATGTTGCTTAGCAACTAGCAGTAACTTGCAACTTTATAACATT
TAGAAGTACAACTTCATTCTCCACATCTCAAAAGCATTAATTCAAAGTATCATAGGATGTTTGT
ACATGCTGTGCATCTTTCAATTGTTTCAAAAACTTTGAACTGGCCTTTTTCGTCAGATTTCTGT
ATTTTACTTCTCAATTGTTATCAAAATGTTAACATCCTACAGCTGCTAGACAAATTATGTGTTG
TTAAGCAAATTCACCAAAGGAATTTTGAACGGTCAAGGAGTGCCCCAAAAAACTGGCTCTAGAA
TTATTACAAAAAAGAAAGCAAAATTATGTTAATTGTGTGGACAAGAAGCATAAGTAATGGATGC
TCCATGTGCAGTCTCTTACTTCAGCAGTACTGTCAAGGTTTGCTGAATCAGATGCTTTAGGATC
ACCAAATGGACGTATTTCATGCTCACGCCCACGCCATACAGGAGATTGTAGTGTGGCTTCCCTT
GATCGCATCCAGTTCAAGTTCCCCTGCAAGGAAAGGATAGACTATGAATACACTTGAGGTATGT
TTAATCTTCAATAACACACTTTTGCTAAACATCAGATACAGCGAACAAATAGAAGAATTATAGA
TTCAGGAACAAACCTGTATTGTATTAATCTCTCCATTGTGTCCAAGTAACCTCATAGGTTGAGC
AAGAGGCCATCTAGGGCTTGTATTGGTACTGTATCTTCGATGGTATATGGCAAAAGGTGATTTG
TAGAGTTCATTCTGAAGGTCCAAATAGAATTGCCCAAGAATCTCAGATCGAAGCATCCCCTTGT
AGACTATAGTTCTGCTTGACAAAGAACAGAAATAAAGTTCATCTGCCCAACTAGCAGATTTTGT
GGCCCGCTCTATCAGCTTCCGGCAGATGTACAACTCTCTCTCTATGTCATCAGCATTATCTTCT
TTTGCAACTTTCACAAATATCTGTTGTATATTAGGCATGGTTTCTTTTGCATAGCGACCTACCA
CTGATACATTAAAAGGAACAGTTCTCCAGCCAAGAACCTCAAGGCCTTCGTCAGTGAATACCTT
GGCAACAACTGAAAAGGCAACATGGTGACATTCAGATCATGCATGACAATGGTACGAAACCAAC
ATGGTAACTGCTGGCTACCAACCATAAGAATGTATTTTTTTAAAAAAAAAATAGAAAACAGGAT
ATGGTACTTAACCACCATATCCATTTTCACTTGTGAAGCAGATGTCATTGTGAGTTTTATAAAA
TAATTGTCCCTTTGAAGGGATGAAAATTTTAGCACACAAGAAACTGAAAATGCATTTGTTATAG
GTTATAGTTGTAGATACAAATAAATGATATTTACTTTCTAAAATTTCATGCAAGGGATAATAGT
GAGTCAGAAAAGGGTCAAGGTGTCATGGGATATGAAGTATGGCAGCATGAAAACTCCCAAATAA
AACATACCGAAACAGGTGGCAACAAGATATGCATTGCGAACATAAATGTTATGATCCATACGAA
CACAGGAAATATTGCACTTTGAAAGCAAGAAATGCTCGGTAATGTGGGCAGAAAATTGAGGTAA
GCATAAGAAACACTCTACCAGCTTTGGCTTCTTCCATAGAATTCTCGTCTTGTGGAAGAAAGAC
CATTCCGACACCTGTATTTGTTCTGTCCAGGGGAGCAAGCCCTTGCTTGTTGGCCCAGTCATTG
AACAAGTCCCATGGGATACCACTCATCAGTCCTGAACCGTCACCGGAGTCATTGTCCGCTCCAC
ACCCACCACGGTGCTCCATGCAGCCAAGAGCCACAAGGGCATCCCGGACAATATTGAATGAAGG
CTCATTTTTCAAGTTTGCGACAAATCCAACACCACAAGCACCACGTTCTGATAAGATTTCATTC
AAATCTGCAGC
						
					

			
		

Sequences
Splice junction sequence	CATCCCGGACAATATTGAATGAAGGCTCATTTTTCAAGTTTGCGACAAATCCAACACCACAAGC ACCACGTTCTGATAAGATTTCATTCAAATCTGCAGCctcagatgcaacataaacaaaatcatca gatgttctccaatagcgtgctgggcggagaccatttcgatcaagacatgctcctactgtccttc catcactg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1155 Transcript exons: 27734189-27734285,27734803-27734873,27734986-27735084,27 735616-27735747,27735866-27736308,27736831-27737143 CTCAGATGCAACATAAACAAAATCATCAGATGTTCTCCAATAGCGTGCTGGGCGGAGACCATTT CGATCAAGACATGCTCCTACTGTCCTTCCATCACTAAATAAGAGCAAAGCAGGTCCATCCCAAG CCTCCATTTGACCTTTATAGTAGTCATAGAAGTCGATTACCTCAGGATATTTTATTGACAATGT AGGATGGTTCTTGTATGCCTCAGGAACGAGAATCATCATAGCTTCAGCAGGACTTCTGCCACTT CTTAGCAGTAATTCAGCAGTACTGTCAAGGTTTGCTGAATCAGATGCTTTAGGATCACCAAATG GACGTATTTCATGCTCACGCCCACGCCATACAGGAGATTGTAGTGTGGCTTCCCTTGATCGCAT CCAGTTCAAGTTCCCCTGTATTGTATTAATCTCTCCATTGTGTCCAAGTAACCTCATAGGTTGA GCAAGAGGCCATCTAGGGCTTGTATTGGTACTGTATCTTCGATGGTATATGGCAAAAGGTGATT TGTAGAGTTCATTCTGAAGGTCCAAATAGAATTGCCCAAGAATCTCAGATCGAAGCATCCCCTT GTAGACTATAGTTCTGCTTGACAAAGAACAGAAATAAAGTTCATCTGCCCAACTAGCAGATTTT GTGGCCCGCTCTATCAGCTTCCGGCAGATGTACAACTCTCTCTCTATGTCATCAGCATTATCTT CTTTTGCAACTTTCACAAATATCTGTTGTATATTAGGCATGGTTTCTTTTGCATAGCGACCTAC CACTGATACATTAAAAGGAACAGTTCTCCAGCCAAGAACCTCAAGGCCTTCGTCAGTGAATACC TTGGCAACAACAGCTTTGGCTTCTTCCATAGAATTCTCGTCTTGTGGAAGAAAGACCATTCCGA CACCTGTATTTGTTCTGTCCAGGGGAGCAAGCCCTTGCTTGTTGGCCCAGTCATTGAACAAGTC CCATGGGATACCACTCATCAGTCCTGAACCGTCACCGGAGTCATTGTCCGCTCCACACCCACCA CGGTGCTCCATGCAGCCAAGAGCCACAAGGGCATCCCGGACAATATTGAATGAAGGCTCATTTT TCAAGTTTGCGACAAATCCAACACCACAAGCACCACGTTCTGATAAGATTTCATTCAAATCTGC AGC
Genomic sequence	CTCAGATGCAACATAAACAAAATCATCAGATGTTCTCCAATAGCGTGCTGGGCGGAGACCATTT CGATCAAGACATGCTCCTACTGTCCTTCCATCACTGCACGCAAGAATATACCAAATCGAACTTG TAAGCAGTGTCAATTCTGTTGCAGGATGCTCTAAATTGGAGAAGTATTGGAATATCTTATTCAT GAAAACAGAAAGCATCCTCTATCATGGGGACTAGTTCAGCAATATTTCAGTTCAGCAATATTTC ATTATTATTTTAATATATGTTGTTATTTTGCATATATCAGTTTTGTCTCCTATATGGAATTTTA TTGCTGTACCATGCTTCAATAGGTTTCTACAGCTACACTTAGATATCGTTTGCCAATACTTCTA ATGACAGCATGTAGCCTTCTCTTATGATTTTATCTTTCACAATAAATAGCTACTTGGTGCATCC TTATTTCTTGAATCAAGGTATATAAATTAGAAGGAAGTCAAATCTGCTGATGCATGAGATGCCT TTGACCAAACTGTGCAAGAAAACTGTGCCTACACATCATGAACTGACATAGCAAAAGAAAATAA ATTAAATACCTAACAGATTAACACAAAAATGATTTTACCTAAATAAGAGCAAAGCAGGTCCATC CCAAGCCTCCATTTGACCTTTATAGTAGTCATAGAAGTCGATTACCTAATGCACAAATGAAGAG AACATTCACTTGAACAGAACTGCTTGCACTAGTTAATATGTGAGGAATTTGATGCATACCCATG GCTTCTATATATACTAACGCATTCCATACCTCAGGATATTTTATTGACAATGTAGGATGGTTCT TGTATGCCTCAGGAACGAGAATCATCATAGCTTCAGCAGGACTTCTGCCACTTCTTAGCAGTAA CTGGTGCAAGAAAGAATTTGATGATTTAATAATAACAGCAGTTTTGCAACAACTTTTAATGCAT TGAAGAAGAGAGCAGGGTGTGTGATGCACATTCAGATTAATATATATAAATGATAATGCACATT GAAATAGATCGAGTAAAAATCATGTTGCTTAGCAACTAGCAGTAACTTGCAACTTTATAACATT TAGAAGTACAACTTCATTCTCCACATCTCAAAAGCATTAATTCAAAGTATCATAGGATGTTTGT ACATGCTGTGCATCTTTCAATTGTTTCAAAAACTTTGAACTGGCCTTTTTCGTCAGATTTCTGT ATTTTACTTCTCAATTGTTATCAAAATGTTAACATCCTACAGCTGCTAGACAAATTATGTGTTG TTAAGCAAATTCACCAAAGGAATTTTGAACGGTCAAGGAGTGCCCCAAAAAACTGGCTCTAGAA TTATTACAAAAAAGAAAGCAAAATTATGTTAATTGTGTGGACAAGAAGCATAAGTAATGGATGC TCCATGTGCAGTCTCTTACTTCAGCAGTACTGTCAAGGTTTGCTGAATCAGATGCTTTAGGATC ACCAAATGGACGTATTTCATGCTCACGCCCACGCCATACAGGAGATTGTAGTGTGGCTTCCCTT GATCGCATCCAGTTCAAGTTCCCCTGCAAGGAAAGGATAGACTATGAATACACTTGAGGTATGT TTAATCTTCAATAACACACTTTTGCTAAACATCAGATACAGCGAACAAATAGAAGAATTATAGA TTCAGGAACAAACCTGTATTGTATTAATCTCTCCATTGTGTCCAAGTAACCTCATAGGTTGAGC AAGAGGCCATCTAGGGCTTGTATTGGTACTGTATCTTCGATGGTATATGGCAAAAGGTGATTTG TAGAGTTCATTCTGAAGGTCCAAATAGAATTGCCCAAGAATCTCAGATCGAAGCATCCCCTTGT AGACTATAGTTCTGCTTGACAAAGAACAGAAATAAAGTTCATCTGCCCAACTAGCAGATTTTGT GGCCCGCTCTATCAGCTTCCGGCAGATGTACAACTCTCTCTCTATGTCATCAGCATTATCTTCT TTTGCAACTTTCACAAATATCTGTTGTATATTAGGCATGGTTTCTTTTGCATAGCGACCTACCA CTGATACATTAAAAGGAACAGTTCTCCAGCCAAGAACCTCAAGGCCTTCGTCAGTGAATACCTT GGCAACAACTGAAAAGGCAACATGGTGACATTCAGATCATGCATGACAATGGTACGAAACCAAC ATGGTAACTGCTGGCTACCAACCATAAGAATGTATTTTTTTAAAAAAAAAATAGAAAACAGGAT ATGGTACTTAACCACCATATCCATTTTCACTTGTGAAGCAGATGTCATTGTGAGTTTTATAAAA TAATTGTCCCTTTGAAGGGATGAAAATTTTAGCACACAAGAAACTGAAAATGCATTTGTTATAG GTTATAGTTGTAGATACAAATAAATGATATTTACTTTCTAAAATTTCATGCAAGGGATAATAGT GAGTCAGAAAAGGGTCAAGGTGTCATGGGATATGAAGTATGGCAGCATGAAAACTCCCAAATAA AACATACCGAAACAGGTGGCAACAAGATATGCATTGCGAACATAAATGTTATGATCCATACGAA CACAGGAAATATTGCACTTTGAAAGCAAGAAATGCTCGGTAATGTGGGCAGAAAATTGAGGTAA GCATAAGAAACACTCTACCAGCTTTGGCTTCTTCCATAGAATTCTCGTCTTGTGGAAGAAAGAC CATTCCGACACCTGTATTTGTTCTGTCCAGGGGAGCAAGCCCTTGCTTGTTGGCCCAGTCATTG AACAAGTCCCATGGGATACCACTCATCAGTCCTGAACCGTCACCGGAGTCATTGTCCGCTCCAC ACCCACCACGGTGCTCCATGCAGCCAAGAGCCACAAGGGCATCCCGGACAATATTGAATGAAGG CTCATTTTTCAAGTTTGCGACAAATCCAACACCACAAGCACCACGTTCTGATAAGATTTCATTC AAATCTGCAGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.149770888

Conservation Information
Conserved circRNAs	NA
PMCS	0.149770888

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							27737023-27734201(+)
27737063-27734803(+)
27737025-27734191(-)
27734252-27737133(-)
						
					

						Potential amino acid sequence
						
							MQPRATRASRTILNEGSFFKFATNPTPQAPRSDKISFKSAASDAT*(+)
MKAHFSSLRQIQHHKHHVLIRFHSNLQPQMQHKQNHQMFSNSVLGGDHFDQDMLLLSFHH*(+)
MEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEEAKA
VVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICRKLI
ERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSPFAIYHRRYSTNTSPR
WPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDSTAE
LLLRSGRSPAEAMMILVPEAYKNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRTVGA
CLDRNGLRPARYWRTSDDFVYVASEAADLNEILSERGACGVGFVANLKNEPSFNIVRDALVALG
CMEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEEAK
AVVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICRKL
IERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSPFAIYHRRYSTNTSP
RWPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDSTA
ELLLRSGRSPAEAMMILVPEAYKNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRTVG
ACLDRNGLRPARYWRTSDDFVYVASEAADLNEILSERGACGVGFVANLKNEPSFNIVRDALVAL
GCMEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEEA
KAVVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICRK
LIERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSPFAIYHRRYSTNTS
PRWPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDST
AELLLRSGRSPAEAMMILVPEAYKNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRTV
GACLDRNGLRPARYWRTSDDFVYVASEAADLNEILSERGACGVGFVANLKNEPSFNIVRDALVA
LGCMEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEE
AKAVVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICR
KLIERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSPFAIYHRRYSTNT
SPRWPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDS
TAELLLRSGRSPAEAMMILVPEAYKNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRT
VGACLDRNGLRPARYWRTSDDFVYVASE(-)
MVSAQHAIGEHLMILFMLHLRLQI*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	27737023-27734201(+) 27737063-27734803(+) 27737025-27734191(-) 27734252-27737133(-)
Potential amino acid sequence	MQPRATRASRTILNEGSFFKFATNPTPQAPRSDKISFKSAASDAT(+) MKAHFSSLRQIQHHKHHVLIRFHSNLQPQMQHKQNHQMFSNSVLGGDHFDQDMLLLSFHH(+) MEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEEAKA VVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICRKLI ERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSPFAIYHRRYSTNTSPR WPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDSTAE LLLRSGRSPAEAMMILVPEAYKNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRTVGA CLDRNGLRPARYWRTSDDFVYVASEAADLNEILSERGACGVGFVANLKNEPSFNIVRDALVALG CMEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEEAK AVVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICRKL IERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSPFAIYHRRYSTNTSP RWPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDSTA ELLLRSGRSPAEAMMILVPEAYKNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRTVG ACLDRNGLRPARYWRTSDDFVYVASEAADLNEILSERGACGVGFVANLKNEPSFNIVRDALVAL GCMEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEEA KAVVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICRK LIERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSPFAIYHRRYSTNTS PRWPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDST AELLLRSGRSPAEAMMILVPEAYKNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRTV GACLDRNGLRPARYWRTSDDFVYVASEAADLNEILSERGACGVGFVANLKNEPSFNIVRDALVA LGCMEHRGGCGADNDSGDGSGLMSGIPWDLFNDWANKQGLAPLDRTNTGVGMVFLPQDENSMEE AKAVVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKETMPNIQQIFVKVAKEDNADDIERELYICR KLIERATKSASWADELYFCSLSSRTIVYKGMLRSEILGQFYLDLQNELYKSPFAIYHRRYSTNT SPRWPLAQPMRLLGHNGEINTIQGNLNWMRSREATLQSPVWRGREHEIRPFGDPKASDSANLDS TAELLLRSGRSPAEAMMILVPEAYKNHPTLSIKYPEVIDFYDYYKGQMEAWDGPALLLFSDGRT VGACLDRNGLRPARYWRTSDDFVYVASE(-) MVSAQHAIGEHLMILFMLHLRLQI*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os07g0658400_circ_g.36

Address

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