Plant Circular RNA Database

Detail information of orai.011G296000_circ_g.1

			
						 General Information
					
						CircRNA Name
						orai.011G296000_circ_g.1
					
						ID in PlantcircBase
						gra_circ_001283
					
						Alias
						Chr11:62631414|62635952
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr11: 62631414-62635952  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.011G296000						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						2
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.011G296000.7:9
Gorai.011G296000.13:9
Gorai.011G296000.10:7
Gorai.011G296000.8:9
Gorai.011G296000.14:3
Gorai.011G296000.1:9
Gorai.011G296000.12:3
Gorai.011G296000.5:9
Gorai.011G296000.6:9
Gorai.011G296000.2:7
Gorai.011G296000.3:7
Gorai.011G296000.9:9
Gorai.011G296000.11:3
Gorai.011G296000.4:9

General Information
CircRNA Name	orai.011G296000_circ_g.1
ID in PlantcircBase	gra_circ_001283
Alias	Chr11:62631414\|62635952
Organism	Gossypium raimondii
Position	chrChr11: 62631414-62635952 JBrowse»
Reference genome	Graimondii_221
Type	ue-circRNA
Identification method	CIRI
Parent gene	Gorai.011G296000
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	NA
Support reads	2
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.011G296000.7:9 Gorai.011G296000.13:9 Gorai.011G296000.10:7 Gorai.011G296000.8:9 Gorai.011G296000.14:3 Gorai.011G296000.1:9 Gorai.011G296000.12:3 Gorai.011G296000.5:9 Gorai.011G296000.6:9 Gorai.011G296000.2:7 Gorai.011G296000.3:7 Gorai.011G296000.9:9 Gorai.011G296000.11:3 Gorai.011G296000.4:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACTTTAAATTTTGCTCTCTATTAGAAGTGATTTCTTAACAATAGCAACAACAAGGCCTGAAACT
CTGTTTGGTGATGTAGCTATAGCTGTGCATCCTCAGtggctgtatcagacaacggcattttcac
ttctccagagttggcaaagtcgtttgattttacttcggaagaacgaatatacaattggtatttt
attcttga

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TGGCTGTATCAGACAACGGCATTTTCACTTCTCCAGAGTTGGCAAAGTCGTTTGATTTTACTTC
GGAAGAACGAATATACAATTGGTATTTTATTCTTGAATCTGATAATCAGTTCTTTATTTTCCTT
TTATAAAGATTCATCTTTTTAAATTGAATTTTGAGGTTTTTATGTTGTTTGCTCCTTATCTTTG
GCCAAATAAAAGTTTTCGATTTACTGAAGTTAACGAAAGTGATTAAATGTATCAATGTTAGAGA
AGAGGCTATTTTAATTATTTCATCCTTATGAACTTATCTTTATGTGTCTGACACAGATGTATTC
AATTCTTTTTCATGTCCAAATATGTGTAGGATAATCGCGTTTACATATTTTAGCTTTATATAGC
TTTTGACAGGTTAATAATTCGTATTATATTGATTTAGGCATGTTTGTGTATTCGTGTGTGGTGT
TTCTATTTTATGTTATGCCATGTATTATATACTGTTTTAGTTTTCTTTTTTTTTTTTCTGAATC
GGGTTTATGTTGTGTTTTACTTTTATCCTTTTCACATGGTTCATATTTTGACAAACCGAACATT
GGATTTAACAATATAATCGTACTGGTTCGTGTTTGTAAAGTTTCAAATAGATGAAATAACTCTA
TCATATCAATCGAGAATACTATTTTTTTAAATATATTTTAGCGGTTGAAAGTTTTTTACATTGA
ACAAATGGTTAGATATATTTTTAATTTTCTTAAAACTTGATGGATGATCTATGTGAATAGAATG
TGAAATATGATGGTAATGATGGTAGGGTTAAACAATTACATATCCTATGAAAAGATATGAAAGT
GCATAAAACTAAATAGTTTTGCACTTATATAAGTGGATTCCTCCCTATATATGTCTGTATAAAA
TAAGTTCTTAGATTTGGTTGTTATCTCCACAATAAGAAACACCCTTTTTTGCTTGTCATTTCAT
TCCTCTTTTTGGTTGACATAGTTAGCATAATTAAAGACATTGGATCACTTTTCAAGTTAAATTT
TTGATCAAATATTGATCTTAAGTATTTCGTTTATGCAGGTCCTGCAATTTTTGTATGTTTGTAA
AGCTTTTACTTGTTTATTTTATTCTGGGAGGGTTTGTGTGTCTAAAAATGCTGTTATGAGCAAC
TGTTCTACTGTTCTGAATTAACCGTCAGAAAGTTTTTTTTGTTAAACTTCAGCATATGTGCCCT
TGTTTAGAATTTAGATATGATTAGATGTTCTTACTTGTAATGAATTTTGTTAACATATATATAT
CTGTTGAGAGTATTTATGGAACTCTTGGATGTCAGGTGGCTGTCTCAAGGCTATTTCAGACCAA
AATTTGACTGGGAAAGTGATCCTTTTGTCATATCAATGCCACCTCCTAATGTTACTGGCTCTCT
GCACATGGGACATGCAATGTTTGTAACTCTTGAGGTTGTGAAGATTATTAAATGAATCTGAAAG
GACTTAGTTGCCATTACTTCTTTCACTGGTAGTGTCAAACATTTAGGATGCATTTGTCAGGCAT
TATTGATACAACATTCTGTGGTTTTCTGAATTTATTAATAAACTTGAAAGTGCAGATAACTACA
TGCGGACAACCTTTGCATCTCAACTTCGAAAGATGTTTCATATAGCATAATCTGATTTTATTCA
ACGCATTTGAGTCTACAGTGGTCGATGTAACTCCTTGTACTCAGAAAATGTCTTCTTAGTAAAA
ATGGCCAGATTCTCTTAATTGTAGTGGTTAGTGTCTTGGATGAACCTTGATGAAGATGTGGAGG
AGGATGAGATATAAAGATACAAAGATCCTTCTAGTTCTAACAGATTCTAACCTTTATTTTTTAG
ACATTGTAATTATTGTAAATTTTGTTGACTTCGCTATTGGTGTTGTCATGCTTATTTATTTAAT
TGTATCCGTCTCCTTTGGTGGTCTCCGTTAGGATATCATGGTTAGGTACCATCGCATGAGGGGA
AGACCAACACTTTGGCTTCCTGGAACTGATCATGCTGGCATTGCAACTCAGGTTAGTCTCTTGA
TGATCATGATTTCTGCTCATCTGATCTCCCGAACTAGTAAGAAAAAAAAGGAAGACATATTTTG
GAATAGTCTAATAATCTAATCCAACTACCTTCAGTTTTAACTTGTGTAATGTTTTCTGGAAAAA
GGATTGATCTTTATGGTTGTATTATCTCTAGTAATCTTTTTGTAAATATAATGTTTTCATCTTT
GTTGTTGATTTATATTCTGCCCTCTTTATACATAATGTTCTGTGTAGAGAATGAGTATATATGT
TGTATCCTGTTGAATGGGAATATATAATTGAACCTATTTTACTTTTCTTTTCCCAGTTGGTTGT
GGAAAGAATGTTGGCTTCTGAAGGAATAAAAAGGGTAGAACTGGGCAGAGATGAATTTGAAAAA
CGAGTTTGGGAGTGGAAAGAGAAGTATGTCTTCCCTTAAATTATTTGCATACTTGGTTTTTCTG
CTGTTCTTTGCTGATTTTGAATCTGTTACTTTGTACATATCATCTATTGTGTTTTTGTTGTTTC
TGAAGAAAGGGTTTTTTTTTTTTGGGGGGGGGGGGGGTTCTCCGCAACTTCAATAAATTCTACT
TCTTCTCCTTCCAAATACTGATACTTATGGGGTTTTATTGCTTTAACCCGTTGCTTAATTTCTG
GTGTTTATTGTTCATTTTTGACCATTAAGGTTTCATATAGGTACTACTTTGTTTTGTATGTTTT
ATCTATTTTTTGTTCATTGCTGGTCTTTTTTCTTTTCAATTTCAGATATGGTGGGACCATTACT
AATCAGATTAAGAGACTTGGGGCTTCTTGTGACTGGACTAGAGAATGTTTCACCCTCGATGAGC
AGCTAAGTCGTAAGACAAGTTTTATATCTAGTAAAAGTGAAATCTAGCTAATGTTCAAAGTCTT
TAAATTATGTGTAAAGTTCCAATCTGTGACCTGTTTTACTTGTTACCTCATTTGTTTTCTTTGC
ATTGTACATATGGCAGTAATAATAGTAGTGATAATCATAGAAGTAATAATTAGGCGCTTACATT
TGTTCAAATAACAGTAGGGTAAGTTTGTGTTCTGAACCTTGCATTCCTATTGCAGGAGCTGTTA
TAGAGGCATTTATTAGACTTCACGAAAAAGGATTAATTTATCAAGGTATATGCCAAAATTCCAT
TGCTTACTATCATGTTTCACTTTGCTAACTGATATTTAGCATGTTTACTTTCTCATTTGATCAT
AATATTCTATCTTCCTCCTTTGCTTCAGCTGCCTATCATAGGGAAAAGAAAATAATGTCAATAT
TATCTTTCTGTGCACTAAAAATCTAGAAGAAATTATGATATCAAATGAAAAACAACAAAGAAGA
CTGGTATTAACATTTAAAAGGAATTTTATATATCTTTTCCCCCTTAGAGTGTATTGATTTAGAA
ATATTGATGGTTCAATTTGACTTCTAGTCTGAGTTAGTCATTGACTGGTCCAAACTTGGTAACA
TGGAACTGATGTAAATAGACTTTTCTGTACTTATTATTGTACATGTGCATATAGAATGTCTGGT
CTGAAAATAGCTGAGCAAAAGACTGAAGGGAAGGAGGTTCTAAACTTAAAAGCTTTTCTTTTGG
ACTTCAAGTACAGTTATTTTTCATGGTGACTTGAATATATTCTCTGGAGTTTGGCGGTAGGATG
TGGGAACTACTTTCTTTTTCGTTTGTTAATTTATCAAATATTTAACTATACAACTCAGCTCAGA
TTTTTCTGATTTGATTTTATTGTTAATTGCACCATATTAGTCTCAGTAACTAACCTAGTTTAAC
TGATATGATATCTTCTTTTAGGGTCTTACATGGTTAACTGGTCTCCAAAGTTACAGACTGCTGT
TTCAGACTTGGTATGAATCTTGTTTGCATGGGGATATTGCTTTTCTTTTTATGCATTTTGTTTT
ACATTCTTTATCATTCAACATTGTCTTTTGCATGTTCCCATAGGAAGTAGAATATTCTGAAGAG
CCTGGTACCCTCTACTATATTAAATATCGCGTTGCTGGAGGTTCAAGGTACTTCTTGTTAGGCA
TTTTTTGTGTGTTTTTGCTTTGCTTTTCTGGAGTAAGAATGGACTTAAATAACTCAAACAAGAA
AATGTAGTCATTCAACTGGATTCATAATTGCCAGAGTAAAAAGATAGAAGGACTGAGAGAAGAC
AGGGAATGTTATGTTACCTTAAGAGCTTTAAAAATTTACTCTAATTGGAATGTCAAATGTGGTA
ACTAAGTGGTAGAGAATCTCCTTATCGTAATATTATTTTATTTTTGATTTAATATAAAATTTAC
ACATGCTTTCATTTCATATGGACATAAATGTCCTCAAATAGATCATTTGCATCTACTTTTTTAA
TATTGCCATGTACTTTGACTGATACTTTAAATTTTGCTCTCTATTAGAAGTGATTTCTTAACAA
TAGCAACAACAAGGCCTGAAACTCTGTTTGGTGATGTAGCTATAGCTGTGCATCCTCAG
						
					

			
		

Sequences
Splice junction sequence	ACTTTAAATTTTGCTCTCTATTAGAAGTGATTTCTTAACAATAGCAACAACAAGGCCTGAAACT CTGTTTGGTGATGTAGCTATAGCTGTGCATCCTCAGtggctgtatcagacaacggcattttcac ttctccagagttggcaaagtcgtttgattttacttcggaagaacgaatatacaattggtatttt attcttga
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TGGCTGTATCAGACAACGGCATTTTCACTTCTCCAGAGTTGGCAAAGTCGTTTGATTTTACTTC GGAAGAACGAATATACAATTGGTATTTTATTCTTGAATCTGATAATCAGTTCTTTATTTTCCTT TTATAAAGATTCATCTTTTTAAATTGAATTTTGAGGTTTTTATGTTGTTTGCTCCTTATCTTTG GCCAAATAAAAGTTTTCGATTTACTGAAGTTAACGAAAGTGATTAAATGTATCAATGTTAGAGA AGAGGCTATTTTAATTATTTCATCCTTATGAACTTATCTTTATGTGTCTGACACAGATGTATTC AATTCTTTTTCATGTCCAAATATGTGTAGGATAATCGCGTTTACATATTTTAGCTTTATATAGC TTTTGACAGGTTAATAATTCGTATTATATTGATTTAGGCATGTTTGTGTATTCGTGTGTGGTGT TTCTATTTTATGTTATGCCATGTATTATATACTGTTTTAGTTTTCTTTTTTTTTTTTCTGAATC GGGTTTATGTTGTGTTTTACTTTTATCCTTTTCACATGGTTCATATTTTGACAAACCGAACATT GGATTTAACAATATAATCGTACTGGTTCGTGTTTGTAAAGTTTCAAATAGATGAAATAACTCTA TCATATCAATCGAGAATACTATTTTTTTAAATATATTTTAGCGGTTGAAAGTTTTTTACATTGA ACAAATGGTTAGATATATTTTTAATTTTCTTAAAACTTGATGGATGATCTATGTGAATAGAATG TGAAATATGATGGTAATGATGGTAGGGTTAAACAATTACATATCCTATGAAAAGATATGAAAGT GCATAAAACTAAATAGTTTTGCACTTATATAAGTGGATTCCTCCCTATATATGTCTGTATAAAA TAAGTTCTTAGATTTGGTTGTTATCTCCACAATAAGAAACACCCTTTTTTGCTTGTCATTTCAT TCCTCTTTTTGGTTGACATAGTTAGCATAATTAAAGACATTGGATCACTTTTCAAGTTAAATTT TTGATCAAATATTGATCTTAAGTATTTCGTTTATGCAGGTCCTGCAATTTTTGTATGTTTGTAA AGCTTTTACTTGTTTATTTTATTCTGGGAGGGTTTGTGTGTCTAAAAATGCTGTTATGAGCAAC TGTTCTACTGTTCTGAATTAACCGTCAGAAAGTTTTTTTTGTTAAACTTCAGCATATGTGCCCT TGTTTAGAATTTAGATATGATTAGATGTTCTTACTTGTAATGAATTTTGTTAACATATATATAT CTGTTGAGAGTATTTATGGAACTCTTGGATGTCAGGTGGCTGTCTCAAGGCTATTTCAGACCAA AATTTGACTGGGAAAGTGATCCTTTTGTCATATCAATGCCACCTCCTAATGTTACTGGCTCTCT GCACATGGGACATGCAATGTTTGTAACTCTTGAGGTTGTGAAGATTATTAAATGAATCTGAAAG GACTTAGTTGCCATTACTTCTTTCACTGGTAGTGTCAAACATTTAGGATGCATTTGTCAGGCAT TATTGATACAACATTCTGTGGTTTTCTGAATTTATTAATAAACTTGAAAGTGCAGATAACTACA TGCGGACAACCTTTGCATCTCAACTTCGAAAGATGTTTCATATAGCATAATCTGATTTTATTCA ACGCATTTGAGTCTACAGTGGTCGATGTAACTCCTTGTACTCAGAAAATGTCTTCTTAGTAAAA ATGGCCAGATTCTCTTAATTGTAGTGGTTAGTGTCTTGGATGAACCTTGATGAAGATGTGGAGG AGGATGAGATATAAAGATACAAAGATCCTTCTAGTTCTAACAGATTCTAACCTTTATTTTTTAG ACATTGTAATTATTGTAAATTTTGTTGACTTCGCTATTGGTGTTGTCATGCTTATTTATTTAAT TGTATCCGTCTCCTTTGGTGGTCTCCGTTAGGATATCATGGTTAGGTACCATCGCATGAGGGGA AGACCAACACTTTGGCTTCCTGGAACTGATCATGCTGGCATTGCAACTCAGGTTAGTCTCTTGA TGATCATGATTTCTGCTCATCTGATCTCCCGAACTAGTAAGAAAAAAAAGGAAGACATATTTTG GAATAGTCTAATAATCTAATCCAACTACCTTCAGTTTTAACTTGTGTAATGTTTTCTGGAAAAA GGATTGATCTTTATGGTTGTATTATCTCTAGTAATCTTTTTGTAAATATAATGTTTTCATCTTT GTTGTTGATTTATATTCTGCCCTCTTTATACATAATGTTCTGTGTAGAGAATGAGTATATATGT TGTATCCTGTTGAATGGGAATATATAATTGAACCTATTTTACTTTTCTTTTCCCAGTTGGTTGT GGAAAGAATGTTGGCTTCTGAAGGAATAAAAAGGGTAGAACTGGGCAGAGATGAATTTGAAAAA CGAGTTTGGGAGTGGAAAGAGAAGTATGTCTTCCCTTAAATTATTTGCATACTTGGTTTTTCTG CTGTTCTTTGCTGATTTTGAATCTGTTACTTTGTACATATCATCTATTGTGTTTTTGTTGTTTC TGAAGAAAGGGTTTTTTTTTTTTGGGGGGGGGGGGGGTTCTCCGCAACTTCAATAAATTCTACT TCTTCTCCTTCCAAATACTGATACTTATGGGGTTTTATTGCTTTAACCCGTTGCTTAATTTCTG GTGTTTATTGTTCATTTTTGACCATTAAGGTTTCATATAGGTACTACTTTGTTTTGTATGTTTT ATCTATTTTTTGTTCATTGCTGGTCTTTTTTCTTTTCAATTTCAGATATGGTGGGACCATTACT AATCAGATTAAGAGACTTGGGGCTTCTTGTGACTGGACTAGAGAATGTTTCACCCTCGATGAGC AGCTAAGTCGTAAGACAAGTTTTATATCTAGTAAAAGTGAAATCTAGCTAATGTTCAAAGTCTT TAAATTATGTGTAAAGTTCCAATCTGTGACCTGTTTTACTTGTTACCTCATTTGTTTTCTTTGC ATTGTACATATGGCAGTAATAATAGTAGTGATAATCATAGAAGTAATAATTAGGCGCTTACATT TGTTCAAATAACAGTAGGGTAAGTTTGTGTTCTGAACCTTGCATTCCTATTGCAGGAGCTGTTA TAGAGGCATTTATTAGACTTCACGAAAAAGGATTAATTTATCAAGGTATATGCCAAAATTCCAT TGCTTACTATCATGTTTCACTTTGCTAACTGATATTTAGCATGTTTACTTTCTCATTTGATCAT AATATTCTATCTTCCTCCTTTGCTTCAGCTGCCTATCATAGGGAAAAGAAAATAATGTCAATAT TATCTTTCTGTGCACTAAAAATCTAGAAGAAATTATGATATCAAATGAAAAACAACAAAGAAGA CTGGTATTAACATTTAAAAGGAATTTTATATATCTTTTCCCCCTTAGAGTGTATTGATTTAGAA ATATTGATGGTTCAATTTGACTTCTAGTCTGAGTTAGTCATTGACTGGTCCAAACTTGGTAACA TGGAACTGATGTAAATAGACTTTTCTGTACTTATTATTGTACATGTGCATATAGAATGTCTGGT CTGAAAATAGCTGAGCAAAAGACTGAAGGGAAGGAGGTTCTAAACTTAAAAGCTTTTCTTTTGG ACTTCAAGTACAGTTATTTTTCATGGTGACTTGAATATATTCTCTGGAGTTTGGCGGTAGGATG TGGGAACTACTTTCTTTTTCGTTTGTTAATTTATCAAATATTTAACTATACAACTCAGCTCAGA TTTTTCTGATTTGATTTTATTGTTAATTGCACCATATTAGTCTCAGTAACTAACCTAGTTTAAC TGATATGATATCTTCTTTTAGGGTCTTACATGGTTAACTGGTCTCCAAAGTTACAGACTGCTGT TTCAGACTTGGTATGAATCTTGTTTGCATGGGGATATTGCTTTTCTTTTTATGCATTTTGTTTT ACATTCTTTATCATTCAACATTGTCTTTTGCATGTTCCCATAGGAAGTAGAATATTCTGAAGAG CCTGGTACCCTCTACTATATTAAATATCGCGTTGCTGGAGGTTCAAGGTACTTCTTGTTAGGCA TTTTTTGTGTGTTTTTGCTTTGCTTTTCTGGAGTAAGAATGGACTTAAATAACTCAAACAAGAA AATGTAGTCATTCAACTGGATTCATAATTGCCAGAGTAAAAAGATAGAAGGACTGAGAGAAGAC AGGGAATGTTATGTTACCTTAAGAGCTTTAAAAATTTACTCTAATTGGAATGTCAAATGTGGTA ACTAAGTGGTAGAGAATCTCCTTATCGTAATATTATTTTATTTTTGATTTAATATAAAATTTAC ACATGCTTTCATTTCATATGGACATAAATGTCCTCAAATAGATCATTTGCATCTACTTTTTTAA TATTGCCATGTACTTTGACTGATACTTTAAATTTTGCTCTCTATTAGAAGTGATTTCTTAACAA TAGCAACAACAAGGCCTGAAACTCTGTTTGGTGATGTAGCTATAGCTGTGCATCCTCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							gar_circ_000501* ghi_circ_000726* 						
					
						PMCS
						0.098437842

Conservation Information
Conserved circRNAs	gar_circ_000501* ghi_circ_000726*
PMCS	0.098437842

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							62632793-62632844(+)
						
						Potential amino acid sequence
						
							MPPPNVTGSLHMGHAMFVTLEDIMVRYHRMRGRPTLWLPGTDHAGIATQLVVERMLASEGIKRV
ELGRDEFEKRVWEWKEKYGGTITNQIKRLGASCDWTRECFTLDEQLSRAVIEAFIRLHEKGLIY
QGSYMVNWSPKLQTAVSDLEVEYSEEPGTLYYIKYRVAGGSRSDFLTIATTRPETLFGDVAIAV
HPQWLYQTTAFSLLQSWQSRLILLRKNEYTIGGCLKAISDQNLTGKVILLSYQCHLLMLLALCT
WDMQCL*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	62632793-62632844(+)
Potential amino acid sequence	MPPPNVTGSLHMGHAMFVTLEDIMVRYHRMRGRPTLWLPGTDHAGIATQLVVERMLASEGIKRV ELGRDEFEKRVWEWKEKYGGTITNQIKRLGASCDWTRECFTLDEQLSRAVIEAFIRLHEKGLIY QGSYMVNWSPKLQTAVSDLEVEYSEEPGTLYYIKYRVAGGSRSDFLTIATTRPETLFGDVAIAV HPQWLYQTTAFSLLQSWQSRLILLRKNEYTIGGCLKAISDQNLTGKVILLSYQCHLLMLLALCT WDMQCL*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.011G296000_circ_g.1

Address

Any questions?

Supported by