Plant Circular RNA Database

Detail information of Os10g0446200_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os10g0446200_circ_g.1
					
						ID in PlantcircBase
						osa_circ_006933
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 16123608-16127255  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os10g0446200						
					
						Parent gene annotation
						
							Hypothetical conserved gene. (Os10t0446200-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os10g0446200_circ_g.2 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os10t0446200-01:6

General Information
CircRNA Name	Os10g0446200_circ_g.1
ID in PlantcircBase	osa_circ_006933
Alias	NA
Organism	Oryza sativa
Position	chr10: 16123608-16127255 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os10g0446200
Parent gene annotation	Hypothetical conserved gene. (Os10t0446200-01)
Parent gene strand	+
Alternative splicing	Os10g0446200_circ_g.2
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os10t0446200-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATTGTTGTATCTATGCACAGGGCACATCTGGCAGTCTGTCTTTCTAATTGCATCAAATGGTGCA
GCAATTTTACCTGCCTTTTGGGCTCTCCGGCAAAAGtatcaaactttctcgttgttgggtcttt
tggcagtaccaataatcagtcagatctggcgcaatgcataccatttcagaaaaacacgacgatt
gtgttaag

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1532
Transcript exons: 16123608-16123717,16124142-16124210,16124324-16125013,16
125278-16125795,16125891-16125955,16127176-16127255
TATCAAACTTTCTCGTTGTTGGGTCTTTTGGCAGTACCAATAATCAGTCAGATCTGGCGCAATG
CATACCATTTCAGAAAAACACGACGATTGTGTTAAGAAATGACCAGATATCTCCAGGAATATGG
TACATTGGTTACTTTAATGGCCTTGGACCTGCTCGCACGCAATCAAAGATGATTAGCCGAGGCA
GGGCACGTTCTGTGAGCACTAGTATAACTGTAGAAGGATGTCCAACTTCAGCACTATGGGGACC
ATATTGTAACCAAACAATAGAAATGATTAGTTGTTCTCAGTCTTCAGGATATAACAACTCGAGA
AATCTTATGGGTTTGAATATTGACAAGAGGAAAACTTTGAATACCAGAGAGCACACAAGGCGTA
TTAATTTTCTGTCGCAGTGGAACCATTTAGAAGAAAAGGGAGTTGGCTCCAACAGTACAACCTA
TTCGAGAATGGACAACTCGATCACTTGTGCCATTTCAAATGGCTCATTATGCTTAAGGCAGGGT
GATATGAAGTTCTACTTCTTGGATGTGGTTGACCTAGCATTGCAATTTGAAATTACAGCTACGA
ATTTTGGGTTAGCTCAAAGGTCATCCTTAATTTGTTACCTGCGCTACAATGCCTTTCCTCGGAG
AGATTTGCATGATTATTCAGGTGACATCAGCAGTGCTCCTTTGGTTTTAAAGTTGCCAAATATT
GGACGGTGGTATATCGCTATTGAGACTGTAAATATAACACAGATGAATAGCACAGCATCAACAC
CTTTACTGGATACGACATGCTTCTCATTAGAGTGGCAAGTGACTGGATGCCTGAATGGAAAAGC
TGGAACCAATTGCTCATGGGAGGCATATGTGCTCCAGAGGGTTCCTAAACGAAGTCCTTCTGTC
CCTTTCGAGTCATATTATGTTCCTAGTGATGGAAAGGCATCCCTGGAGTATAGTCACTTCTCCC
TGGAACAATTTTTAAGCAACTCATCTTTTGAGCCATTTGCATGGACTTATTTCTTTCTGGATAT
TCCCGAAGGTTCAGCCGGTGCGCTTATCCATGTCCAGATAAAATCAGATAAAGAATTGAATTAT
GAGTTGTACTCGAGATATGGTGGTTTACCATCAAATGAGAGTTGGGATTATTATGCAAGCAGGA
CAAGCAGCAGTAATGGCTCAGTATATTTTTCATTACAAAATTCCACAAATTCAGATATGGATCT
ATCTATTTTCTATGCAAAGGAGGGAACTTGGTGCTTTGGTGTGAAACATCCAAGTGATAAATCA
AATTCTCAGACGTACATGTCCATATCTCTTCAGGGATGCCATAAGAACTGCAATCAGAAAGGAG
CGTGTCATTCCTCAATTGATGAAAGTGGGCTAACGTTCTACAGCTTCTGCACGTGCGATCGTGA
TCATGGTGGGTTTGATTGCAATGATGAATTAGTTTCACCTAATGGGCACATCTGGCAGTCTGTC
TTTCTAATTGCATCAAATGGTGCAGCAATTTTACCTGCCTTTTGGGCTCTCCGGCAAAAG
						
					

						Genomic sequence
						
							TATCAAACTTTCTCGTTGTTGGGTCTTTTGGCAGTACCAATAATCAGTCAGATCTGGCGCAATG
CATACCATTTCAGAAAAACACGACGATTGTGTTAAGAAATGACCAGGTTAACAATCCTGATGCT
GTAATTTGTAAATCGATATGCTGTTCTTACCTTTTTACAGTAATAACAGTCTTAGTAGCAGATT
TGACACTGATGCAGAAGTGCACATCGGTGGTTATCTTGATTGAGTTACAAATAGTTGTATGATT
ACACGTAAACTAATAATGACATTTGGATCCTTATAATTGAAAGTCAACTTCCACACCGCATAAA
CCTGTTAGGTCTATTTATTGAGTTCTTCTGTGCCCTTAGTGCTGGAATTTTCTCAAGTCAAATG
ATTGATTCTGCCCATACAGTTCTATTTACTTGTGTTATCCATTGGCCTTATCTGATCATTAAGT
GCAAGAAATGTATTGTTGTCCCCTGATGTAACAGCTCCATCTTCCGTTGTAGCATCTTATGGTT
TGTCAACCATTGTTCTGTGCAGATATCTCCAGGAATATGGTACATTGGTTACTTTAATGGCCTT
GGACCTGCTCGCACGCAATCAAAGATGGTATGCCTCATTTCTAACTAGGGAATGTGTAGTTTAC
TGCACTATCATCTATTTTATTTTTCAGCATGAATGCATCAAGCAAATTTTGAATTGTTGATAAT
ATACTTCTGCAGATTAGCCGAGGCAGGGCACGTTCTGTGAGCACTAGTATAACTGTAGAAGGAT
GTCCAACTTCAGCACTATGGGGACCATATTGTAACCAAACAATAGAAATGATTAGTTGTTCTCA
GTCTTCAGGATATAACAACTCGAGAAATCTTATGGGTTTGAATATTGACAAGAGGAAAACTTTG
AATACCAGAGAGCACACAAGGCGTATTAATTTTCTGTCGCAGTGGAACCATTTAGAAGAAAAGG
GAGTTGGCTCCAACAGTACAACCTATTCGAGAATGGACAACTCGATCACTTGTGCCATTTCAAA
TGGCTCATTATGCTTAAGGCAGGGTGATATGAAGTTCTACTTCTTGGATGTGGTTGACCTAGCA
TTGCAATTTGAAATTACAGCTACGAATTTTGGGTTAGCTCAAAGGTCATCCTTAATTTGTTACC
TGCGCTACAATGCCTTTCCTCGGAGAGATTTGCATGATTATTCAGGTGACATCAGCAGTGCTCC
TTTGGTTTTAAAGTTGCCAAATATTGGACGGTGGTATATCGCTATTGAGACTGTAAATATAACA
CAGATGAATAGCACAGCATCAACACCTTTACTGGATACGACATGCTTCTCATTAGAGTGGCAAG
TGACTGGATGCCTGAATGGAAAAGCTGGAACCAATTGCTCATGGGAGGCATATGTGCTCCAGGT
AGGATGAGAAGTTATGGAATTTACTTTTGTTATCGACTGTAGCCACACATGTTTTGACCTTTCA
ATCTCCGGTTTCTATGATGTGATGATTTTAAAGTTGAAATAAACCAAACACTTTGCTACCCATG
AATTGCCATCTGACTGATTTTGTAGTTTTTCCATCACAAGTTCTTTTTTGTGCTGGCATCTGCA
TGCTTTGTTAGGTAAAACCTAGTTTCTGCAAAGACATCTTTATTAATTAATCACTGTTCTTAAA
ATGCAGAGGGTTCCTAAACGAAGTCCTTCTGTCCCTTTCGAGTCATATTATGTTCCTAGTGATG
GAAAGGCATCCCTGGAGTATAGTCACTTCTCCCTGGAACAATTTTTAAGCAACTCATCTTTTGA
GCCATTTGCATGGACTTATTTCTTTCTGGATATTCCCGAAGGTTCAGCCGGTGCGCTTATCCAT
GTCCAGATAAAATCAGATAAAGAATTGAATTATGAGTTGTACTCGAGATATGGTGGTTTACCAT
CAAATGAGAGTTGGGATTATTATGCAAGCAGGACAAGCAGCAGTAATGGCTCAGTATATTTTTC
ATTACAAAATTCCACAAATTCAGATATGGATCTATCTATTTTCTATGCAAAGGAGGGAACTTGG
TGCTTTGGTGTGAAACATCCAAGTGATAAATCAAATTCTCAGACGTACATGTCCATATCTCTTC
AGGGATGCCATAAGAACTGCAATCAGAAAGGAGCGTGTCATTCCTCAATTGATGAAAGTGGGCT
AACGTTCTACAGGTAATTCCACAAGATGTTTCCCTATAGCGTGAAAATATTTGTTTCTCTTTTT
TTGCTCTTTGCGCTGTAACGATATTTTTTTCTTCATTTTCTAGCTTCTGCACGTGCGATCGTGA
TCATGGTGGGTTTGATTGCAATGATGAATTAGTTTCACCTAATGGTAAACTCCCTCGTATTTAG
TTTCTAAATTTTCTCAGCTAATGCATACTACAGCAGTAGTAGCCCTATTTCTGGGTAGAAATCA
CAAATGTATCTAATATACTCCCTCCTTCCCAAATTGATCATCATATAAGTTTATGCACCAAGAC
CAAGGGCAATTTAAATCACATCAATCAAGACACCATGCACACATTCTCCCACAATGCATGCATC
AATTAAAACCCTATGCCAATTACACCCTAGCATACACACATTCTCTCATACTGCATTAATTGTA
TTTCGATGAAATCCGTGTCCATGCAGTTATATGATGATCAATTTGAGAAATTTTGGATTCTATT
ACATGATGTTCAATTTGGGAAGGAGGGAGTAATTCTTTAGCAGCAGCAGACTTTAATATTTTTC
TACACTAGGGCATTTTGTGGTAACTGAGATTACCTTGGTTGCTAGTTAGACTTCATGTACGTGT
AAGTGTAACTCCGTAGTAGTAAGCAATTCAAAGTATGTGCTTATTTGGAGTTTTCTGTTCCAAA
CACACTCTACTTAATACACATTTTGTTCATTACAAACTTGATATGGCTGGAACTTTTGGGTTAA
TCCCCTTTAGATATGTATTTTTGCTTGAGGACAGAATACAATACTAGGCTACCTTTATACTGAG
GTGCCTCTAGATAAGGGAAAATGAAACAAACTAGTAATATAATACTAATAGGACTCTGTTGACA
AAATAAAACTAGGAAACTCTAACAGAGGAATAAGAAATATGACATCTCTTAGCCTATTAGGATT
CTCCAACTGCTGCAGAACTTGCTTATCCTGAATTAATGTTATGCCGACGCACCATAATGTCCAT
CCATAACAAACTACTGAAATGTTGTTCTGTGCAGACTTTTTAGCTGCAGAGAGGCAACTGAATA
TCCAAACTATTGTTGTTTGTAGGAAGTAATTTATTCCATAGATTTTTAGAATGACCCAGAGTTA
ACAAAGCTGAGACAAACTGTCCTACGTAAACTTCTTTGGCGGATGAAAAGTACAAAAAATTATG
ATCCAGTGTATACCAAGTTCTTGACATATGTAGTTGGAATTCTTCAAAAAAAAAAAGAGAGAGA
GAGAGAGAAGTGGTTGGAACTTCCTTTCCAACCTTGCTTAATGTTAGTTGCAGCTTATTTTCCA
GGGAGTGAATCTACTTTATGCAATAAATATTGTTGTATCTATGCACAGGGCACATCTGGCAGTC
TGTCTTTCTAATTGCATCAAATGGTGCAGCAATTTTACCTGCCTTTTGGGCTCTCCGGCAAAAG
						
					

			
		

Sequences
Splice junction sequence	ATTGTTGTATCTATGCACAGGGCACATCTGGCAGTCTGTCTTTCTAATTGCATCAAATGGTGCA GCAATTTTACCTGCCTTTTGGGCTCTCCGGCAAAAGtatcaaactttctcgttgttgggtcttt tggcagtaccaataatcagtcagatctggcgcaatgcataccatttcagaaaaacacgacgatt gtgttaag
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1532 Transcript exons: 16123608-16123717,16124142-16124210,16124324-16125013,16 125278-16125795,16125891-16125955,16127176-16127255 TATCAAACTTTCTCGTTGTTGGGTCTTTTGGCAGTACCAATAATCAGTCAGATCTGGCGCAATG CATACCATTTCAGAAAAACACGACGATTGTGTTAAGAAATGACCAGATATCTCCAGGAATATGG TACATTGGTTACTTTAATGGCCTTGGACCTGCTCGCACGCAATCAAAGATGATTAGCCGAGGCA GGGCACGTTCTGTGAGCACTAGTATAACTGTAGAAGGATGTCCAACTTCAGCACTATGGGGACC ATATTGTAACCAAACAATAGAAATGATTAGTTGTTCTCAGTCTTCAGGATATAACAACTCGAGA AATCTTATGGGTTTGAATATTGACAAGAGGAAAACTTTGAATACCAGAGAGCACACAAGGCGTA TTAATTTTCTGTCGCAGTGGAACCATTTAGAAGAAAAGGGAGTTGGCTCCAACAGTACAACCTA TTCGAGAATGGACAACTCGATCACTTGTGCCATTTCAAATGGCTCATTATGCTTAAGGCAGGGT GATATGAAGTTCTACTTCTTGGATGTGGTTGACCTAGCATTGCAATTTGAAATTACAGCTACGA ATTTTGGGTTAGCTCAAAGGTCATCCTTAATTTGTTACCTGCGCTACAATGCCTTTCCTCGGAG AGATTTGCATGATTATTCAGGTGACATCAGCAGTGCTCCTTTGGTTTTAAAGTTGCCAAATATT GGACGGTGGTATATCGCTATTGAGACTGTAAATATAACACAGATGAATAGCACAGCATCAACAC CTTTACTGGATACGACATGCTTCTCATTAGAGTGGCAAGTGACTGGATGCCTGAATGGAAAAGC TGGAACCAATTGCTCATGGGAGGCATATGTGCTCCAGAGGGTTCCTAAACGAAGTCCTTCTGTC CCTTTCGAGTCATATTATGTTCCTAGTGATGGAAAGGCATCCCTGGAGTATAGTCACTTCTCCC TGGAACAATTTTTAAGCAACTCATCTTTTGAGCCATTTGCATGGACTTATTTCTTTCTGGATAT TCCCGAAGGTTCAGCCGGTGCGCTTATCCATGTCCAGATAAAATCAGATAAAGAATTGAATTAT GAGTTGTACTCGAGATATGGTGGTTTACCATCAAATGAGAGTTGGGATTATTATGCAAGCAGGA CAAGCAGCAGTAATGGCTCAGTATATTTTTCATTACAAAATTCCACAAATTCAGATATGGATCT ATCTATTTTCTATGCAAAGGAGGGAACTTGGTGCTTTGGTGTGAAACATCCAAGTGATAAATCA AATTCTCAGACGTACATGTCCATATCTCTTCAGGGATGCCATAAGAACTGCAATCAGAAAGGAG CGTGTCATTCCTCAATTGATGAAAGTGGGCTAACGTTCTACAGCTTCTGCACGTGCGATCGTGA TCATGGTGGGTTTGATTGCAATGATGAATTAGTTTCACCTAATGGGCACATCTGGCAGTCTGTC TTTCTAATTGCATCAAATGGTGCAGCAATTTTACCTGCCTTTTGGGCTCTCCGGCAAAAG
Genomic sequence	TATCAAACTTTCTCGTTGTTGGGTCTTTTGGCAGTACCAATAATCAGTCAGATCTGGCGCAATG CATACCATTTCAGAAAAACACGACGATTGTGTTAAGAAATGACCAGGTTAACAATCCTGATGCT GTAATTTGTAAATCGATATGCTGTTCTTACCTTTTTACAGTAATAACAGTCTTAGTAGCAGATT TGACACTGATGCAGAAGTGCACATCGGTGGTTATCTTGATTGAGTTACAAATAGTTGTATGATT ACACGTAAACTAATAATGACATTTGGATCCTTATAATTGAAAGTCAACTTCCACACCGCATAAA CCTGTTAGGTCTATTTATTGAGTTCTTCTGTGCCCTTAGTGCTGGAATTTTCTCAAGTCAAATG ATTGATTCTGCCCATACAGTTCTATTTACTTGTGTTATCCATTGGCCTTATCTGATCATTAAGT GCAAGAAATGTATTGTTGTCCCCTGATGTAACAGCTCCATCTTCCGTTGTAGCATCTTATGGTT TGTCAACCATTGTTCTGTGCAGATATCTCCAGGAATATGGTACATTGGTTACTTTAATGGCCTT GGACCTGCTCGCACGCAATCAAAGATGGTATGCCTCATTTCTAACTAGGGAATGTGTAGTTTAC TGCACTATCATCTATTTTATTTTTCAGCATGAATGCATCAAGCAAATTTTGAATTGTTGATAAT ATACTTCTGCAGATTAGCCGAGGCAGGGCACGTTCTGTGAGCACTAGTATAACTGTAGAAGGAT GTCCAACTTCAGCACTATGGGGACCATATTGTAACCAAACAATAGAAATGATTAGTTGTTCTCA GTCTTCAGGATATAACAACTCGAGAAATCTTATGGGTTTGAATATTGACAAGAGGAAAACTTTG AATACCAGAGAGCACACAAGGCGTATTAATTTTCTGTCGCAGTGGAACCATTTAGAAGAAAAGG GAGTTGGCTCCAACAGTACAACCTATTCGAGAATGGACAACTCGATCACTTGTGCCATTTCAAA TGGCTCATTATGCTTAAGGCAGGGTGATATGAAGTTCTACTTCTTGGATGTGGTTGACCTAGCA TTGCAATTTGAAATTACAGCTACGAATTTTGGGTTAGCTCAAAGGTCATCCTTAATTTGTTACC TGCGCTACAATGCCTTTCCTCGGAGAGATTTGCATGATTATTCAGGTGACATCAGCAGTGCTCC TTTGGTTTTAAAGTTGCCAAATATTGGACGGTGGTATATCGCTATTGAGACTGTAAATATAACA CAGATGAATAGCACAGCATCAACACCTTTACTGGATACGACATGCTTCTCATTAGAGTGGCAAG TGACTGGATGCCTGAATGGAAAAGCTGGAACCAATTGCTCATGGGAGGCATATGTGCTCCAGGT AGGATGAGAAGTTATGGAATTTACTTTTGTTATCGACTGTAGCCACACATGTTTTGACCTTTCA ATCTCCGGTTTCTATGATGTGATGATTTTAAAGTTGAAATAAACCAAACACTTTGCTACCCATG AATTGCCATCTGACTGATTTTGTAGTTTTTCCATCACAAGTTCTTTTTTGTGCTGGCATCTGCA TGCTTTGTTAGGTAAAACCTAGTTTCTGCAAAGACATCTTTATTAATTAATCACTGTTCTTAAA ATGCAGAGGGTTCCTAAACGAAGTCCTTCTGTCCCTTTCGAGTCATATTATGTTCCTAGTGATG GAAAGGCATCCCTGGAGTATAGTCACTTCTCCCTGGAACAATTTTTAAGCAACTCATCTTTTGA GCCATTTGCATGGACTTATTTCTTTCTGGATATTCCCGAAGGTTCAGCCGGTGCGCTTATCCAT GTCCAGATAAAATCAGATAAAGAATTGAATTATGAGTTGTACTCGAGATATGGTGGTTTACCAT CAAATGAGAGTTGGGATTATTATGCAAGCAGGACAAGCAGCAGTAATGGCTCAGTATATTTTTC ATTACAAAATTCCACAAATTCAGATATGGATCTATCTATTTTCTATGCAAAGGAGGGAACTTGG TGCTTTGGTGTGAAACATCCAAGTGATAAATCAAATTCTCAGACGTACATGTCCATATCTCTTC AGGGATGCCATAAGAACTGCAATCAGAAAGGAGCGTGTCATTCCTCAATTGATGAAAGTGGGCT AACGTTCTACAGGTAATTCCACAAGATGTTTCCCTATAGCGTGAAAATATTTGTTTCTCTTTTT TTGCTCTTTGCGCTGTAACGATATTTTTTTCTTCATTTTCTAGCTTCTGCACGTGCGATCGTGA TCATGGTGGGTTTGATTGCAATGATGAATTAGTTTCACCTAATGGTAAACTCCCTCGTATTTAG TTTCTAAATTTTCTCAGCTAATGCATACTACAGCAGTAGTAGCCCTATTTCTGGGTAGAAATCA CAAATGTATCTAATATACTCCCTCCTTCCCAAATTGATCATCATATAAGTTTATGCACCAAGAC CAAGGGCAATTTAAATCACATCAATCAAGACACCATGCACACATTCTCCCACAATGCATGCATC AATTAAAACCCTATGCCAATTACACCCTAGCATACACACATTCTCTCATACTGCATTAATTGTA TTTCGATGAAATCCGTGTCCATGCAGTTATATGATGATCAATTTGAGAAATTTTGGATTCTATT ACATGATGTTCAATTTGGGAAGGAGGGAGTAATTCTTTAGCAGCAGCAGACTTTAATATTTTTC TACACTAGGGCATTTTGTGGTAACTGAGATTACCTTGGTTGCTAGTTAGACTTCATGTACGTGT AAGTGTAACTCCGTAGTAGTAAGCAATTCAAAGTATGTGCTTATTTGGAGTTTTCTGTTCCAAA CACACTCTACTTAATACACATTTTGTTCATTACAAACTTGATATGGCTGGAACTTTTGGGTTAA TCCCCTTTAGATATGTATTTTTGCTTGAGGACAGAATACAATACTAGGCTACCTTTATACTGAG GTGCCTCTAGATAAGGGAAAATGAAACAAACTAGTAATATAATACTAATAGGACTCTGTTGACA AAATAAAACTAGGAAACTCTAACAGAGGAATAAGAAATATGACATCTCTTAGCCTATTAGGATT CTCCAACTGCTGCAGAACTTGCTTATCCTGAATTAATGTTATGCCGACGCACCATAATGTCCAT CCATAACAAACTACTGAAATGTTGTTCTGTGCAGACTTTTTAGCTGCAGAGAGGCAACTGAATA TCCAAACTATTGTTGTTTGTAGGAAGTAATTTATTCCATAGATTTTTAGAATGACCCAGAGTTA ACAAAGCTGAGACAAACTGTCCTACGTAAACTTCTTTGGCGGATGAAAAGTACAAAAAATTATG ATCCAGTGTATACCAAGTTCTTGACATATGTAGTTGGAATTCTTCAAAAAAAAAAAGAGAGAGA GAGAGAGAAGTGGTTGGAACTTCCTTTCCAACCTTGCTTAATGTTAGTTGCAGCTTATTTTCCA GGGAGTGAATCTACTTTATGCAATAAATATTGTTGTATCTATGCACAGGGCACATCTGGCAGTC TGTCTTTCTAATTGCATCAAATGGTGCAGCAATTTTACCTGCCTTTTGGGCTCTCCGGCAAAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.44086834

Conservation Information
Conserved circRNAs	NA
PMCS	0.44086834

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							16127213-16123647(+)
16124209-16123703(+)
16123681-16127228(-)
						
						Potential amino acid sequence
						
							MVQQFYLPFGLSGKSIKLSRCWVFWQYQ*(+)
MISRGRARSVSTSITVEGCPTSALWGPYCNQTIEMISCSQSSGYNNSRNLMGLNIDKRKTLNTR
EHTRRINFLSQWNHLEEKGVGSNSTTYSRMDNSITCAISNGSLCLRQGDMKFYFLDVVDLALQF
EITATNFGLAQRSSLICYLRYNAFPRRDLHDYSGDISSAPLVLKLPNIGRWYIAIETVNITQMN
STASTPLLDTTCFSLEWQVTGCLNGKAGTNCSWEAYVLQRVPKRSPSVPFESYYVPSDGKASLE
YSHFSLEQFLSNSSFEPFAWTYFFLDIPEGSAGALIHVQIKSDKELNYELYSRYGGLPSNESWD
YYASRTSSSNGSVYFSLQNSTNSDMDLSIFYAKEGTWCFGVKHPSDKSNSQTYMSISLQGCHKN
CNQKGACHSSIDESGLTFYSFCTCDRDHGGFDCNDELVSPNGHIWQSVFLIASNGAAILPAFWA
LRQKYQTFSLLGLLAVPIISQIWRNAYHFRKTRRLC*(+)
MVCIAPDLTDYWYCQKTQQRESLILLPESPKGR*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	16127213-16123647(+) 16124209-16123703(+) 16123681-16127228(-)
Potential amino acid sequence	MVQQFYLPFGLSGKSIKLSRCWVFWQYQ(+) MISRGRARSVSTSITVEGCPTSALWGPYCNQTIEMISCSQSSGYNNSRNLMGLNIDKRKTLNTR EHTRRINFLSQWNHLEEKGVGSNSTTYSRMDNSITCAISNGSLCLRQGDMKFYFLDVVDLALQF EITATNFGLAQRSSLICYLRYNAFPRRDLHDYSGDISSAPLVLKLPNIGRWYIAIETVNITQMN STASTPLLDTTCFSLEWQVTGCLNGKAGTNCSWEAYVLQRVPKRSPSVPFESYYVPSDGKASLE YSHFSLEQFLSNSSFEPFAWTYFFLDIPEGSAGALIHVQIKSDKELNYELYSRYGGLPSNESWD YYASRTSSSNGSVYFSLQNSTNSDMDLSIFYAKEGTWCFGVKHPSDKSNSQTYMSISLQGCHKN CNQKGACHSSIDESGLTFYSFCTCDRDHGGFDCNDELVSPNGHIWQSVFLIASNGAAILPAFWA LRQKYQTFSLLGLLAVPIISQIWRNAYHFRKTRRLC(+) MVCIAPDLTDYWYCQKTQQRESLILLPESPKGR*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os10g0446200_circ_g.1

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