Plant Circular RNA Database

Detail information of Os05g0358700_circ_g.6

			
						 General Information
					
						CircRNA Name
						Os05g0358700_circ_g.6
					
						ID in PlantcircBase
						osa_circ_027589
					
						Alias
						Os_ciR9827
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr5: 17057124-17060554  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os05g0358700						
					
						Parent gene annotation
						
							Similar to predicted protein. (Os05t0358700-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os05g0358700_circ_g.7 Os05g0358700_circ_g.8 						
					
						Support reads
						2/1
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os05t0358700-01:6

General Information
CircRNA Name	Os05g0358700_circ_g.6
ID in PlantcircBase	osa_circ_027589
Alias	Os_ciR9827
Organism	Oryza sativa
Position	chr5: 17057124-17060554 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os05g0358700
Parent gene annotation	Similar to predicted protein. (Os05t0358700-01)
Parent gene strand	-
Alternative splicing	Os05g0358700_circ_g.7 Os05g0358700_circ_g.8
Support reads	2/1
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os05t0358700-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTTCTTGCTTCTCATGGAATTCTTCAAGAAATTCACGCCTCTTCAATGCAAAATGTAGATAGAG
AACTTGTGAAGCTTTCTTATATAGACGCCACCTAAActgtacaccctgcttagctctagcttcc
agtagagcatcaagcctagatgacccatgatgttggaaagggcgtcggagaaacaattctgggc
agagccac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1207
Transcript exons: 17057124-17057240,17057327-17057566,17058215-17058388,17
058476-17058643,17058779-17059184,17060453-17060554
CTGTACACCCTGCTTAGCTCTAGCTTCCAGTAGAGCATCAAGCCTAGATGACCCATGATGTTGG
AAAGGGCGTCGGAGAAACAATTCTGGGCAGAGCCACCAGCCAGTAATAAATATCTCTGATTTTG
CTTGCTCAATGGAGGAAGCAATTGCCTGAAATGCAGCTTCTCCGTCTATAAACCACTGTACCAT
ACTCCCATCTGGCATGAGACCCCTTGGTGGAGCAAATGAACCAAAACGATGAGGGTAACACCAG
CCCTCTGGAGTTTGTCGAGCAGCATTTATTGCACTAACCCAGTCTTTCACTTTAGAAGAACTTC
TTGTTCGTAACTTTAAAGTCTGGCCACCAGAAGACACCTGGAGTCCGAAATGCAACGGGTTTCG
TTCCTTGATCTCTTTTGCTAGAGATATTTGGCCCTCTCCACTTATATCCATATGTGGCAGTGCA
TCAAAGATAAGGACATCTAAAAGCTTTGGATCAAAAGGATCTTTGAGTAAAGCTAAGAATCCTG
GCTTCAGGACAACCCAAACCTTTTGCCAGCTGCTTTTGCAACAGCTAAACAACCCACATGAACA
ACAGTTTTCTTTATGGTCCTTCTGAATTTTTGGCAAGTGTCCAACAGATACATAATCTTCCTTT
AGCTTAGGCCCATATTCCGGTAAAAATGACAAACATGATACCTCCAAAAATTTGCAAACCTCCG
GTGAGTTGACAATGTCCAAGTTCCCCAAAAAATGGTTCAGATATTCTTGCATGGCAACTTTTGC
TCGATCAGAAACTGAGTGTTGACGCCCCAGAGCTGGTCGAATGACAGGCAAAACAGCACTTGAA
GGAACATTTCTGCCACAACAGGTTCAATGTCTTGCTTACTGCATGCATGGGATAACATATGGAG
ACTCAACTGCTCTAATTCAACATTTGCAATATGATAAAGCATAACTATACATCAACTACTAGTG
CGTCGTTGATGTATAAAAATTTTTACCTATGTCTAATGGAGTTTTCTTCAGCCTGTGCAGGAAC
ATTCACATCGTCTGCTTCATCCTCATCATGTCCTACTGGCATGTGCTCCCCAATTCCCAGATTT
TGGAGCCACTCTTTGACCTGTTCTTGCTTCTCATGGAATTCTTCAAGAAATTCACGCCTCTTCA
ATGCAAAATGTAGATAGAGAACTTGTGAAGCTTTCTTATATAGACGCCACCTAAA
						
					

						Genomic sequence
						
							CTGTACACCCTGCTTAGCTCTAGCTTCCAGTAGAGCATCAAGCCTAGATGACCCATGATGTTGG
AAAGGGCGTCGGAGAAACAATTCTGGGCAGAGCCACCAGCCAGTAATAAATATCTGCATCAAAT
ATTCGGTTATCTTAAGATTTATACAATTGGAGTTATTTTCTCCATATGTAACTATTGAAGCAAC
ACAAAGTTAACCTCTGATTTTGCTTGCTCAATGGAGGAAGCAATTGCCTGAAATGCAGCTTCTC
CGTCTATAAACCACTGTACCATACTCCCATCTGGCATGAGACCCCTTGGTGGAGCAAATGAACC
AAAACGATGAGGGTAACACCAGCCCTCTGGAGTTTGTCGAGCAGCATTTATTGCACTAACCCAG
TCTTTCACTTTAGAAGAACTTCTTGTTCGTAACTTTAAAGTCTGGCCACCAGAAGACACCTTCC
TCCAAAAAAGCACAAATATGTTTAGACTCCACAGAAATATAAGGTTAACGCTTGTATCAAAATA
GTATGAACAGGTGGACCAGCTCAGAACTACCAAGATAGTATCAATTGATTGGAAGGCAGGAATT
CCACAAGAAATAATTCAGTTCCCACATAAATAAGAAAAGAATCGCCGCATTCAAAACTTGTTTT
AGAGTTTATGTATTTTTTTATGAGTATGCAATTCACTACAAAAATATTCTGTAAAAGTAGCATT
TTTCATAACAAGGATGTTATGTATTCATTAAGATATCCATACGACAAAAGGAGAAAGAGATAAT
CCTGCAGACTCCTAAGGCTCTATTGGGCATTGTGGTGGCTTTCCAGAAGCACTTATATATTTAC
TGTAAGATGAAATAATTAACTGAGTGCATCTTTTTTAGGCCCAGAACAAAAAAATCACTAAGAT
TTTTTAAGTAATATTCTGATATCTAGCTAGCTGTCACTTTGCAGCAAGGCCAAACTAAACAATC
ACAATCTGGCTAAACTCAACATTCTTGCAATAGATATAAAAATGTTTCCATCGTCAACAACCAA
AAATAAAAGTATTGCATTTCAAACAAACGTGCTAACTTGGCATGAGATCATAAAATGGAATATG
TACCTGGAGTCCGAAATGCAACGGGTTTCGTTCCTTGATCTCTTTTGCTAGAGATATTTGGCCC
TCTCCACTTATATCCATATGTGGCAGTGCATCAAAGATAAGGACATCTAAAAGCTTTGGATCAA
AAGGATCTTTGAGTAAAGCTAAGAATCCTGGCTTCAGGACAACCCAAACCTATTGAAAAATTGT
TCAATTCAATATCTTAAATACAATGATTATAAGATAGCTAAATACAAAACTGAACTACAAAAAA
TATAATACCTTTTGCCAGCTGCTTTTGCAACAGCTAAACAACCCACATGAACAACAGTTTTCTT
TATGGTCCTTCTGAATTTTTGGCAAGTGTCCAACAGATACATAATCTTCCTTTAGCTTAGGCCC
ATATTCCGGTAAAAATGACAAACATGATACCTCCAAAAATTTGCAAACCTGTATTTTGAAAGAT
ATTTTAGTACTGACTCTTGACGATAAAACTAATCTAGATGCAGATAGGATATTTTGGTCAACAT
TTATTCTAATTGGAAACAATAGAGTGAAATGTATAAAGATTTGGGTAATGAGTACCTCCGGTGA
GTTGACAATGTCCAAGTTCCCCAAAAAATGGTTCAGATATTCTTGCATGGCAACTTTTGCTCGA
TCAGAAACTGAGTGTTGACGCCCCAGAGCTGGTCGAATGACAGGCAAAACAGCACTTGAAGGAA
CATTTCTGCCACAACAGGTTCAATGTCTTGCTTACTGCATGCATGGGATAACATATGGAGACTC
AACTGCTCTAATTCAACATTTGCAATATGATAAAGCATAACTATACATCAACTACTAGTGCGTC
GTTGATGTATAAAAATTTTTACCTATGTCTAATGGAGTTTTCTTCAGCCTGTGCAGGAACATTC
ACATCGTCTGCTTCATCCTCATCATGTCCTACTGGCATGTGCTCCCCAATTCCCAGATTTTGGA
GCCACTCTTTGACCTTGAATCACAAAATAAAGAAATCAACTTAGTACTCCCCGCTTAACTCTGC
TTCCCATCCTAATGACATTTCTCCAGATATCAAATGGTTAAAACGTGTCATATTTAAGTTAAAG
TAACGAGGAAGAAGTAGGTGAGTTGCTCCAACATAAAAATCTGTGCTTAAAGACTTACTCCCTG
CCTGTATCCACAAATATAAGGGATTTTGGAGTGCTGCTTTCCCAATCTTTCCCTTCAACCCCTT
ATATTTGTGGAAACTGCCTCTTTTTGTTTGGACATAATATTAAAAAACATAAAAATTTGCAAAA
CCTGATGAACTGATGAGGAATATGTAAATATTGATCCACTAAGCGGACTAGGAAGTATGAGCCA
TAAATAATAAGCTATTTTATTATCTGTTATCTAACAAACTAAATCTGACCAGATGCAATGGCTT
CCTTCTATACCCCATCCTATTTTCACACATATTTATGCCTCCTCCACTTTCCATAGGGTGCATC
AATACTTGTAAAAGTTAAATGATGATAAATTCTAATAACAAGATGTTACGGTAACATTTTAAAA
TAAAAAGGGGTCTCCTTAAATGAAATGCAGTCATCCTGCGTTTTCGAGAAAAAAAATAAAAAGG
GATCGGCAAGAACCTTAAAACAATAAATAGAATATATAATATGAGATACACTTGAAGCAAGGGG
GAGAGAAGATGTCATGCCCTGCACCTCATCATAAAGATCTTTACTTGTGCCAGGAACAATCTCT
TGGAGATACATCAATAGGGAACCACAATAGATTGGTGTTGCTGGTGTCACCAGGGGTTTTTGAG
GAGCAGGTGTGCCACCGCGCAGGCAACAAATAGGTGAGATCCTCTAGTCGTCAATAGTCTCATA
TGACAACAAGGACGACCTAAATCTGAAGAGGATAAGGCAATGATGCCATATCCACACTAGCAAC
AAGGAGAAGTTCAACCTAGCTCTAATACCATATTATGAATTGGATGTCTCTATTCAACCTAGCT
CTAATACCATACTGTTAACAGTTGTTTTTATTATGACCTAATGGCTCATATAATTCTAAAATAA
ATAGTTGCGGCCCATTCTAATCCTAAAACTAACTAACTTTTGAGATGTACAGAAGTTAAGAGTA
AAAAAATTAATTATATCTCCAATCAAACAGCACAACTGCACGGCAACTCAACGAGTTTGCTTTA
AGGAACTTACAGGTTGAAATCCAGTACTGAAAAGCATCATGAATCATAATGGTCATATAACCAA
CCTGTTCTTGCTTCTCATGGAATTCTTCAAGAAATTCACGCCTCTTCAATGCAAAATGTAGATA
GAGAACTTGTGAAGCTTTCTTATATAGACGCCACCTAAA
						
					

			
		

Sequences
Splice junction sequence	GTTCTTGCTTCTCATGGAATTCTTCAAGAAATTCACGCCTCTTCAATGCAAAATGTAGATAGAG AACTTGTGAAGCTTTCTTATATAGACGCCACCTAAActgtacaccctgcttagctctagcttcc agtagagcatcaagcctagatgacccatgatgttggaaagggcgtcggagaaacaattctgggc agagccac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1207 Transcript exons: 17057124-17057240,17057327-17057566,17058215-17058388,17 058476-17058643,17058779-17059184,17060453-17060554 CTGTACACCCTGCTTAGCTCTAGCTTCCAGTAGAGCATCAAGCCTAGATGACCCATGATGTTGG AAAGGGCGTCGGAGAAACAATTCTGGGCAGAGCCACCAGCCAGTAATAAATATCTCTGATTTTG CTTGCTCAATGGAGGAAGCAATTGCCTGAAATGCAGCTTCTCCGTCTATAAACCACTGTACCAT ACTCCCATCTGGCATGAGACCCCTTGGTGGAGCAAATGAACCAAAACGATGAGGGTAACACCAG CCCTCTGGAGTTTGTCGAGCAGCATTTATTGCACTAACCCAGTCTTTCACTTTAGAAGAACTTC TTGTTCGTAACTTTAAAGTCTGGCCACCAGAAGACACCTGGAGTCCGAAATGCAACGGGTTTCG TTCCTTGATCTCTTTTGCTAGAGATATTTGGCCCTCTCCACTTATATCCATATGTGGCAGTGCA TCAAAGATAAGGACATCTAAAAGCTTTGGATCAAAAGGATCTTTGAGTAAAGCTAAGAATCCTG GCTTCAGGACAACCCAAACCTTTTGCCAGCTGCTTTTGCAACAGCTAAACAACCCACATGAACA ACAGTTTTCTTTATGGTCCTTCTGAATTTTTGGCAAGTGTCCAACAGATACATAATCTTCCTTT AGCTTAGGCCCATATTCCGGTAAAAATGACAAACATGATACCTCCAAAAATTTGCAAACCTCCG GTGAGTTGACAATGTCCAAGTTCCCCAAAAAATGGTTCAGATATTCTTGCATGGCAACTTTTGC TCGATCAGAAACTGAGTGTTGACGCCCCAGAGCTGGTCGAATGACAGGCAAAACAGCACTTGAA GGAACATTTCTGCCACAACAGGTTCAATGTCTTGCTTACTGCATGCATGGGATAACATATGGAG ACTCAACTGCTCTAATTCAACATTTGCAATATGATAAAGCATAACTATACATCAACTACTAGTG CGTCGTTGATGTATAAAAATTTTTACCTATGTCTAATGGAGTTTTCTTCAGCCTGTGCAGGAAC ATTCACATCGTCTGCTTCATCCTCATCATGTCCTACTGGCATGTGCTCCCCAATTCCCAGATTT TGGAGCCACTCTTTGACCTGTTCTTGCTTCTCATGGAATTCTTCAAGAAATTCACGCCTCTTCA ATGCAAAATGTAGATAGAGAACTTGTGAAGCTTTCTTATATAGACGCCACCTAAA
Genomic sequence	CTGTACACCCTGCTTAGCTCTAGCTTCCAGTAGAGCATCAAGCCTAGATGACCCATGATGTTGG AAAGGGCGTCGGAGAAACAATTCTGGGCAGAGCCACCAGCCAGTAATAAATATCTGCATCAAAT ATTCGGTTATCTTAAGATTTATACAATTGGAGTTATTTTCTCCATATGTAACTATTGAAGCAAC ACAAAGTTAACCTCTGATTTTGCTTGCTCAATGGAGGAAGCAATTGCCTGAAATGCAGCTTCTC CGTCTATAAACCACTGTACCATACTCCCATCTGGCATGAGACCCCTTGGTGGAGCAAATGAACC AAAACGATGAGGGTAACACCAGCCCTCTGGAGTTTGTCGAGCAGCATTTATTGCACTAACCCAG TCTTTCACTTTAGAAGAACTTCTTGTTCGTAACTTTAAAGTCTGGCCACCAGAAGACACCTTCC TCCAAAAAAGCACAAATATGTTTAGACTCCACAGAAATATAAGGTTAACGCTTGTATCAAAATA GTATGAACAGGTGGACCAGCTCAGAACTACCAAGATAGTATCAATTGATTGGAAGGCAGGAATT CCACAAGAAATAATTCAGTTCCCACATAAATAAGAAAAGAATCGCCGCATTCAAAACTTGTTTT AGAGTTTATGTATTTTTTTATGAGTATGCAATTCACTACAAAAATATTCTGTAAAAGTAGCATT TTTCATAACAAGGATGTTATGTATTCATTAAGATATCCATACGACAAAAGGAGAAAGAGATAAT CCTGCAGACTCCTAAGGCTCTATTGGGCATTGTGGTGGCTTTCCAGAAGCACTTATATATTTAC TGTAAGATGAAATAATTAACTGAGTGCATCTTTTTTAGGCCCAGAACAAAAAAATCACTAAGAT TTTTTAAGTAATATTCTGATATCTAGCTAGCTGTCACTTTGCAGCAAGGCCAAACTAAACAATC ACAATCTGGCTAAACTCAACATTCTTGCAATAGATATAAAAATGTTTCCATCGTCAACAACCAA AAATAAAAGTATTGCATTTCAAACAAACGTGCTAACTTGGCATGAGATCATAAAATGGAATATG TACCTGGAGTCCGAAATGCAACGGGTTTCGTTCCTTGATCTCTTTTGCTAGAGATATTTGGCCC TCTCCACTTATATCCATATGTGGCAGTGCATCAAAGATAAGGACATCTAAAAGCTTTGGATCAA AAGGATCTTTGAGTAAAGCTAAGAATCCTGGCTTCAGGACAACCCAAACCTATTGAAAAATTGT TCAATTCAATATCTTAAATACAATGATTATAAGATAGCTAAATACAAAACTGAACTACAAAAAA TATAATACCTTTTGCCAGCTGCTTTTGCAACAGCTAAACAACCCACATGAACAACAGTTTTCTT TATGGTCCTTCTGAATTTTTGGCAAGTGTCCAACAGATACATAATCTTCCTTTAGCTTAGGCCC ATATTCCGGTAAAAATGACAAACATGATACCTCCAAAAATTTGCAAACCTGTATTTTGAAAGAT ATTTTAGTACTGACTCTTGACGATAAAACTAATCTAGATGCAGATAGGATATTTTGGTCAACAT TTATTCTAATTGGAAACAATAGAGTGAAATGTATAAAGATTTGGGTAATGAGTACCTCCGGTGA GTTGACAATGTCCAAGTTCCCCAAAAAATGGTTCAGATATTCTTGCATGGCAACTTTTGCTCGA TCAGAAACTGAGTGTTGACGCCCCAGAGCTGGTCGAATGACAGGCAAAACAGCACTTGAAGGAA CATTTCTGCCACAACAGGTTCAATGTCTTGCTTACTGCATGCATGGGATAACATATGGAGACTC AACTGCTCTAATTCAACATTTGCAATATGATAAAGCATAACTATACATCAACTACTAGTGCGTC GTTGATGTATAAAAATTTTTACCTATGTCTAATGGAGTTTTCTTCAGCCTGTGCAGGAACATTC ACATCGTCTGCTTCATCCTCATCATGTCCTACTGGCATGTGCTCCCCAATTCCCAGATTTTGGA GCCACTCTTTGACCTTGAATCACAAAATAAAGAAATCAACTTAGTACTCCCCGCTTAACTCTGC TTCCCATCCTAATGACATTTCTCCAGATATCAAATGGTTAAAACGTGTCATATTTAAGTTAAAG TAACGAGGAAGAAGTAGGTGAGTTGCTCCAACATAAAAATCTGTGCTTAAAGACTTACTCCCTG CCTGTATCCACAAATATAAGGGATTTTGGAGTGCTGCTTTCCCAATCTTTCCCTTCAACCCCTT ATATTTGTGGAAACTGCCTCTTTTTGTTTGGACATAATATTAAAAAACATAAAAATTTGCAAAA CCTGATGAACTGATGAGGAATATGTAAATATTGATCCACTAAGCGGACTAGGAAGTATGAGCCA TAAATAATAAGCTATTTTATTATCTGTTATCTAACAAACTAAATCTGACCAGATGCAATGGCTT CCTTCTATACCCCATCCTATTTTCACACATATTTATGCCTCCTCCACTTTCCATAGGGTGCATC AATACTTGTAAAAGTTAAATGATGATAAATTCTAATAACAAGATGTTACGGTAACATTTTAAAA TAAAAAGGGGTCTCCTTAAATGAAATGCAGTCATCCTGCGTTTTCGAGAAAAAAAATAAAAAGG GATCGGCAAGAACCTTAAAACAATAAATAGAATATATAATATGAGATACACTTGAAGCAAGGGG GAGAGAAGATGTCATGCCCTGCACCTCATCATAAAGATCTTTACTTGTGCCAGGAACAATCTCT TGGAGATACATCAATAGGGAACCACAATAGATTGGTGTTGCTGGTGTCACCAGGGGTTTTTGAG GAGCAGGTGTGCCACCGCGCAGGCAACAAATAGGTGAGATCCTCTAGTCGTCAATAGTCTCATA TGACAACAAGGACGACCTAAATCTGAAGAGGATAAGGCAATGATGCCATATCCACACTAGCAAC AAGGAGAAGTTCAACCTAGCTCTAATACCATATTATGAATTGGATGTCTCTATTCAACCTAGCT CTAATACCATACTGTTAACAGTTGTTTTTATTATGACCTAATGGCTCATATAATTCTAAAATAA ATAGTTGCGGCCCATTCTAATCCTAAAACTAACTAACTTTTGAGATGTACAGAAGTTAAGAGTA AAAAAATTAATTATATCTCCAATCAAACAGCACAACTGCACGGCAACTCAACGAGTTTGCTTTA AGGAACTTACAGGTTGAAATCCAGTACTGAAAAGCATCATGAATCATAATGGTCATATAACCAA CCTGTTCTTGCTTCTCATGGAATTCTTCAAGAAATTCACGCCTCTTCAATGCAAAATGTAGATA GAGAACTTGTGAAGCTTTCTTATATAGACGCCACCTAAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.224863138

Conservation Information
Conserved circRNAs	NA
PMCS	0.224863138

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							17058837-17059064(-)
17057181-17060499(-)
						
						Potential amino acid sequence
						
							MQEYLNHFLGNLDIVNSPEVCKFLEVSCLSFLPEYGPKLKEDYVSVGHLPKIQKDHKENCCSCG
LFSCCKSSWQKVWVVLKPGFLALLKDPFDPKLLDVLIFDALPHMDISGEGQISLAKEIKERNPL
HFGLQVSSGGQTLKLRTRSSSKVKDWVSAINAARQTPEGWCYPHRFGSFAPPRGLMPDGSMVQW
FIDGEAAFQAIASSIEQAKSEIFITGWWLCPELFLRRPFQHHGSSRLDALLEARAKQGVQFRWR
LYKKASQVLYLHFALKRREFLEEFHEKQEQVKEWLQNLGIGEHMPVGHDEDEADDVNVPAQAEE
NSIRHR*(-)
MGHLGLMLYWKLELSRVYSLGGVYIRKLHKFSIYILH*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	17058837-17059064(-) 17057181-17060499(-)
Potential amino acid sequence	MQEYLNHFLGNLDIVNSPEVCKFLEVSCLSFLPEYGPKLKEDYVSVGHLPKIQKDHKENCCSCG LFSCCKSSWQKVWVVLKPGFLALLKDPFDPKLLDVLIFDALPHMDISGEGQISLAKEIKERNPL HFGLQVSSGGQTLKLRTRSSSKVKDWVSAINAARQTPEGWCYPHRFGSFAPPRGLMPDGSMVQW FIDGEAAFQAIASSIEQAKSEIFITGWWLCPELFLRRPFQHHGSSRLDALLEARAKQGVQFRWR LYKKASQVLYLHFALKRREFLEEFHEKQEQVKEWLQNLGIGEHMPVGHDEDEADDVNVPAQAEE NSIRHR(-) MGHLGLMLYWKLELSRVYSLGGVYIRKLHKFSIYILH(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os05g0358700_circ_g.6

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