Plant Circular RNA Database

Detail information of Os10g0471350_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os10g0471350_circ_g.3
					
						ID in PlantcircBase
						osa_circ_007073
					
						Alias
						Os_ciR5160
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 17477083-17479841  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os10g0471350						
					
						Parent gene annotation
						
							Similar to helicase domain-containing protein. (Os10t0471350-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os10g0471350_circ_g.2 Os10g0471350_circ_g.4 Os10g0471350_circ_g.5 						
					
						Support reads
						3/2
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os10t0471350-01:6

General Information
CircRNA Name	Os10g0471350_circ_g.3
ID in PlantcircBase	osa_circ_007073
Alias	Os_ciR5160
Organism	Oryza sativa
Position	chr10: 17477083-17479841 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os10g0471350
Parent gene annotation	Similar to helicase domain-containing protein. (Os10t0471350-01)
Parent gene strand	-
Alternative splicing	Os10g0471350_circ_g.2 Os10g0471350_circ_g.4 Os10g0471350_circ_g.5
Support reads	3/2
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os10t0471350-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCCATACAAGGCTCAAATTTAGTTCGGTAGCCGACCAAGCTTCAAGGGATTGCCTAGTTGCAAC
GCTGTAATTTCCATATTCCTTATAAATGTCAACATCcttcaatcctcttgttttgctaacaaac
ccaatgtcagatagtagatcaaaaaactgattacgcatgtcatccatcatctgcagggtcatgg
gtgaaagg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1122
Transcript exons: 17477083-17477269,17477532-17477724,17477829-17478102,17
478180-17478339,17478950-17479164,17479749-17479841
CTTCAATCCTCTTGTTTTGCTAACAAACCCAATGTCAGATAGTAGATCAAAAAACTGATTACGC
ATGTCATCCATCATCTGCAGGGTCATGGGTGAAAGGAAATTTTCCCAGCAGAAAGAGCGTTCTC
TTCCACTGCGTCTTGCTTCCTTCCATGCTTCGAACGCCTTAACAAGAGCAATGTGATCACTGCA
GGAGTCACCAGCAAATGATCTTTTGACAGCATCAGCTTCTTCTTTCCTATCTATTGGGAGCACA
AATGGATTACGATATGCAAGAGCAGCAGCGATTGTTAATGCAGGATCCAGACACTGAAAAACAG
ATCCAATAAGCAGCATTTTTCCAATGTTTGGATCTAGCGGAAGTGTACAAAGATGTCGCCCTAA
AGAAGTCAGCTCCTCCACGTCATCCAATGCTCCAACGGTTTTCAAAAGCTCGATCGCATTATTA
ACAGAAAGCGGGTCTGGTGGCTGCAGTGCCTTGGCTAAGAAAGAGGCTACAGCTCCAAGCTGTA
AGCTTTTGATAGTAAGACAGAGCTCTTGCAAAGGAGTCCTAAGAATTTCAGGTAACTGAAACTG
TGGCATCGCATCATAAATGACTTTAGGATACAGCCTATAGCAAGCACCAGGCTGAACACGTCCT
GCACGACCTCGCCTCTGATGGGCAGAAGCTTTTGATATCCATGATGGTAGAAGGCATGCAAGCT
TATTTAAGGCATCATAACTTGTTTCCTTTGCTTTGCCACAATCAATTACATAGACAACATCATC
TATTGTAATACTGCTTTCTGCAATATTTGTTGCCAAAACAATTTTCCTCATATTGGCTGGTGGT
CTATCAAAAATTTCACGCTGATTGACAGTGGGCATAGAACCATGGAGTGGAATAACCAGGAATC
TATTGGAATTTCCAAGGAGATTATTCCCCTTAATCTTATCCAAAAGTTTCGAAATTTCATCCCA
ACCAGTAAGGAACACAAGGATTGCACCTTCTCCTTCATGACGACAGATGTACTCAATTGTACCT
TCAACAAGGCTCAAATTTAGTTCGGTAGCCGACCAAGCTTCAAGGGATTGCCTAGTTGCAACGC
TGTAATTTCCATATTCCTTATAAATGTCAACATC
						
					

						Genomic sequence
						
							CTTCAATCCTCTTGTTTTGCTAACAAACCCAATGTCAGATAGTAGATCAAAAAACTGATTACGC
ATGTCATCCATCATCTGCAGGGTCATGGGTGAAAGGAAATTTTCCCAGCAGAAAGAGCGTTCTC
TTCCACTGCGTCTTGCTTCCTTCCATGCTTCGAACGCCTTAACAAGAGCAATGTGATCACTGGA
AAAATAAGTTACAAAAAATTATCAACATAACATTACTTTCAAAACTAAAGTACTTGTAGAAATG
TTATAATTGTCAAAGTAAGTTATCAGCGGTAACCTAGTACGCAACCCAGCATTCTACATCAATT
TGGTACTTATGTCTGAGGTAATAACAGTATAACACTCACATTCTTTGCATTATATGGTGACAAA
GATATTTTAGTACAGGTAAGACAAAAGGAATCAATACGGAACAGAGAAAAGATTATATTAATTA
CCTGCAGGAGTCACCAGCAAATGATCTTTTGACAGCATCAGCTTCTTCTTTCCTATCTATTGGG
AGCACAAATGGATTACGATATGCAAGAGCAGCAGCGATTGTTAATGCAGGATCCAGACACTGAA
AAACAGATCCAATAAGCAGCATTTTTCCAATGTTTGGATCTAGCGGAAGTGTACAAAGATGTCG
CCCTGCATACACAGAAGAAGACACACAGAGTAAATAAAAACAGTTAGAATAGAATCAAGAAAGA
GATCCACAATACAAGACTAAAAGGTGCAGCAAAATTTCAAACCTAAAGAAGTCAGCTCCTCCAC
GTCATCCAATGCTCCAACGGTTTTCAAAAGCTCGATCGCATTATTAACAGAAAGCGGGTCTGGT
GGCTGCAGTGCCTTGGCTAAGAAAGAGGCTACAGCTCCAAGCTGTAAGCTTTTGATAGTAAGAC
AGAGCTCTTGCAAAGGAGTCCTAAGAATTTCAGGTAACTGAAACTGTGGCATCGCATCATAAAT
GACTTTAGGATACAGCCTATAGCAAGCACCAGGCTGAACACGTCCTGCACGACCTCGCCTCTGT
GTAACATAACCAAAATCCATTTAGTACATCTATTGTTGGATTTTTCAACTTTCCATAAACTGTG
ACAGTGTACCTGATGGGCAGAAGCTTTTGATATCCATGATGGTAGAAGGCATGCAAGCTTATTT
AAGGCATCATAACTTGTTTCCTTTGCTTTGCCACAATCAATTACATAGACAACATCATCTATTG
TAATACTGCTTTCTGCAATATTTGTTGCCAAAACAATTTTCCTGAAAAATACATATGCAACAGC
AATAAGCAATACAGGTTGTTCAAATAAAATAGGATTAGCCATTAAGACACAGCTAGCTCAAATG
TAACATAAAAAGCGTCAAAATAAAACAAAATAAAATGGTAATCAAACACAATACATAAATAATG
AATAATGAAGCAAAAAACAAAAAACCTGAATGTCAGTGAATAAGATAGCTTTTTAAGAAACCCA
GATAGCTCAAAACTGGGACTTGGAAAAATACAGAAGATATGTCATTGCTAAATAAGCCTAGCTT
AAGTTATTTTATTAACATTACATAATTCTGTACCTTCACAAGTTCACTTGCCAACCATAGTATA
TCAAATATGCCAACTATATGTACCAGATCTGGCTTTAATTTTATAGATACTGAAACTGGAAATT
AGAAGGGTAGGAAACCCAGCATGCTTCTATAAGTTCCTAATAAAAGTGTAATAGCAGAAATATA
AATAGATAACATGAGAAGAAATGCAAGTAGAAAGGCAAAAACTTGGCTATAACATATTAGCCAT
AACAACTAGACAGCAAAGATTCATGCATCCAAGTCCAATCTTCTATATTTCTAGGTAGGTACCT
AGGTGATTTACCTCATATTGGCTGGTGGTCTATCAAAAATTTCACGCTGATTGACAGTGGGCAT
AGAACCATGGAGTGGAATAACCAGGAATCTATTGGAATTTCCAAGGAGATTATTCCCCTTAATC
TTATCCAAAAGTTTCGAAATTTCATCCCAACCAGTAAGGAACACAAGGATTGCACCTTCTCCTT
CATGACGACAGATGTACTCAATTGTACCTTCAACCTAAAATGTCAGCATAAAGATGTCTTATTT
TAGCACGATTTTAAAGTGCATAACAATTGGAACAAGACTAACGAACAAATGCAAGTACGGTGCA
GCCATGCAAGAGATGAATTTTGCAACGAACAGCGTGCAAAAGTTGACTCTTGGAACATCACAAG
GGACAATAGTAATATAGATTCTATTAGCACTACACTAGTTGACATAACCAAATAAGATCACAAT
TGGCAAGATGAAGAAACTTTAAGCTCATAACTGTTGTCCGAGCAGTTCTCTAGCTCAGATCCTC
TGATGAATAATATAAAATGAATAAGACAAATAAAGAATGAATGAAATACAAAAGGCAATTTTCA
TCAGTTTTCTTCAGTTTGCAGAGAAGAACACAGCACATATATTTGCACTGAAAGCCCTTACTAT
CTCGAAGTGTTTCTTTATGTTCTTTCTACTCCTGATTAATCTGAATGCAAATGAAGTTGATCTA
AGACATCTATTAGTAGGTAAAGAGCAATGTCCCCTTCAGCAATATCCTTCATGCATCTCCACTT
AATTGCAACCATGAATATGAAATAGACAGTAAAAGTCCATACAAGGCTCAAATTTAGTTCGGTA
GCCGACCAAGCTTCAAGGGATTGCCTAGTTGCAACGCTGTAATTTCCATATTCCTTATAAATGT
CAACATC
						
					

			
		

Sequences
Splice junction sequence	TCCATACAAGGCTCAAATTTAGTTCGGTAGCCGACCAAGCTTCAAGGGATTGCCTAGTTGCAAC GCTGTAATTTCCATATTCCTTATAAATGTCAACATCcttcaatcctcttgttttgctaacaaac ccaatgtcagatagtagatcaaaaaactgattacgcatgtcatccatcatctgcagggtcatgg gtgaaagg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1122 Transcript exons: 17477083-17477269,17477532-17477724,17477829-17478102,17 478180-17478339,17478950-17479164,17479749-17479841 CTTCAATCCTCTTGTTTTGCTAACAAACCCAATGTCAGATAGTAGATCAAAAAACTGATTACGC ATGTCATCCATCATCTGCAGGGTCATGGGTGAAAGGAAATTTTCCCAGCAGAAAGAGCGTTCTC TTCCACTGCGTCTTGCTTCCTTCCATGCTTCGAACGCCTTAACAAGAGCAATGTGATCACTGCA GGAGTCACCAGCAAATGATCTTTTGACAGCATCAGCTTCTTCTTTCCTATCTATTGGGAGCACA AATGGATTACGATATGCAAGAGCAGCAGCGATTGTTAATGCAGGATCCAGACACTGAAAAACAG ATCCAATAAGCAGCATTTTTCCAATGTTTGGATCTAGCGGAAGTGTACAAAGATGTCGCCCTAA AGAAGTCAGCTCCTCCACGTCATCCAATGCTCCAACGGTTTTCAAAAGCTCGATCGCATTATTA ACAGAAAGCGGGTCTGGTGGCTGCAGTGCCTTGGCTAAGAAAGAGGCTACAGCTCCAAGCTGTA AGCTTTTGATAGTAAGACAGAGCTCTTGCAAAGGAGTCCTAAGAATTTCAGGTAACTGAAACTG TGGCATCGCATCATAAATGACTTTAGGATACAGCCTATAGCAAGCACCAGGCTGAACACGTCCT GCACGACCTCGCCTCTGATGGGCAGAAGCTTTTGATATCCATGATGGTAGAAGGCATGCAAGCT TATTTAAGGCATCATAACTTGTTTCCTTTGCTTTGCCACAATCAATTACATAGACAACATCATC TATTGTAATACTGCTTTCTGCAATATTTGTTGCCAAAACAATTTTCCTCATATTGGCTGGTGGT CTATCAAAAATTTCACGCTGATTGACAGTGGGCATAGAACCATGGAGTGGAATAACCAGGAATC TATTGGAATTTCCAAGGAGATTATTCCCCTTAATCTTATCCAAAAGTTTCGAAATTTCATCCCA ACCAGTAAGGAACACAAGGATTGCACCTTCTCCTTCATGACGACAGATGTACTCAATTGTACCT TCAACAAGGCTCAAATTTAGTTCGGTAGCCGACCAAGCTTCAAGGGATTGCCTAGTTGCAACGC TGTAATTTCCATATTCCTTATAAATGTCAACATC
Genomic sequence	CTTCAATCCTCTTGTTTTGCTAACAAACCCAATGTCAGATAGTAGATCAAAAAACTGATTACGC ATGTCATCCATCATCTGCAGGGTCATGGGTGAAAGGAAATTTTCCCAGCAGAAAGAGCGTTCTC TTCCACTGCGTCTTGCTTCCTTCCATGCTTCGAACGCCTTAACAAGAGCAATGTGATCACTGGA AAAATAAGTTACAAAAAATTATCAACATAACATTACTTTCAAAACTAAAGTACTTGTAGAAATG TTATAATTGTCAAAGTAAGTTATCAGCGGTAACCTAGTACGCAACCCAGCATTCTACATCAATT TGGTACTTATGTCTGAGGTAATAACAGTATAACACTCACATTCTTTGCATTATATGGTGACAAA GATATTTTAGTACAGGTAAGACAAAAGGAATCAATACGGAACAGAGAAAAGATTATATTAATTA CCTGCAGGAGTCACCAGCAAATGATCTTTTGACAGCATCAGCTTCTTCTTTCCTATCTATTGGG AGCACAAATGGATTACGATATGCAAGAGCAGCAGCGATTGTTAATGCAGGATCCAGACACTGAA AAACAGATCCAATAAGCAGCATTTTTCCAATGTTTGGATCTAGCGGAAGTGTACAAAGATGTCG CCCTGCATACACAGAAGAAGACACACAGAGTAAATAAAAACAGTTAGAATAGAATCAAGAAAGA GATCCACAATACAAGACTAAAAGGTGCAGCAAAATTTCAAACCTAAAGAAGTCAGCTCCTCCAC GTCATCCAATGCTCCAACGGTTTTCAAAAGCTCGATCGCATTATTAACAGAAAGCGGGTCTGGT GGCTGCAGTGCCTTGGCTAAGAAAGAGGCTACAGCTCCAAGCTGTAAGCTTTTGATAGTAAGAC AGAGCTCTTGCAAAGGAGTCCTAAGAATTTCAGGTAACTGAAACTGTGGCATCGCATCATAAAT GACTTTAGGATACAGCCTATAGCAAGCACCAGGCTGAACACGTCCTGCACGACCTCGCCTCTGT GTAACATAACCAAAATCCATTTAGTACATCTATTGTTGGATTTTTCAACTTTCCATAAACTGTG ACAGTGTACCTGATGGGCAGAAGCTTTTGATATCCATGATGGTAGAAGGCATGCAAGCTTATTT AAGGCATCATAACTTGTTTCCTTTGCTTTGCCACAATCAATTACATAGACAACATCATCTATTG TAATACTGCTTTCTGCAATATTTGTTGCCAAAACAATTTTCCTGAAAAATACATATGCAACAGC AATAAGCAATACAGGTTGTTCAAATAAAATAGGATTAGCCATTAAGACACAGCTAGCTCAAATG TAACATAAAAAGCGTCAAAATAAAACAAAATAAAATGGTAATCAAACACAATACATAAATAATG AATAATGAAGCAAAAAACAAAAAACCTGAATGTCAGTGAATAAGATAGCTTTTTAAGAAACCCA GATAGCTCAAAACTGGGACTTGGAAAAATACAGAAGATATGTCATTGCTAAATAAGCCTAGCTT AAGTTATTTTATTAACATTACATAATTCTGTACCTTCACAAGTTCACTTGCCAACCATAGTATA TCAAATATGCCAACTATATGTACCAGATCTGGCTTTAATTTTATAGATACTGAAACTGGAAATT AGAAGGGTAGGAAACCCAGCATGCTTCTATAAGTTCCTAATAAAAGTGTAATAGCAGAAATATA AATAGATAACATGAGAAGAAATGCAAGTAGAAAGGCAAAAACTTGGCTATAACATATTAGCCAT AACAACTAGACAGCAAAGATTCATGCATCCAAGTCCAATCTTCTATATTTCTAGGTAGGTACCT AGGTGATTTACCTCATATTGGCTGGTGGTCTATCAAAAATTTCACGCTGATTGACAGTGGGCAT AGAACCATGGAGTGGAATAACCAGGAATCTATTGGAATTTCCAAGGAGATTATTCCCCTTAATC TTATCCAAAAGTTTCGAAATTTCATCCCAACCAGTAAGGAACACAAGGATTGCACCTTCTCCTT CATGACGACAGATGTACTCAATTGTACCTTCAACCTAAAATGTCAGCATAAAGATGTCTTATTT TAGCACGATTTTAAAGTGCATAACAATTGGAACAAGACTAACGAACAAATGCAAGTACGGTGCA GCCATGCAAGAGATGAATTTTGCAACGAACAGCGTGCAAAAGTTGACTCTTGGAACATCACAAG GGACAATAGTAATATAGATTCTATTAGCACTACACTAGTTGACATAACCAAATAAGATCACAAT TGGCAAGATGAAGAAACTTTAAGCTCATAACTGTTGTCCGAGCAGTTCTCTAGCTCAGATCCTC TGATGAATAATATAAAATGAATAAGACAAATAAAGAATGAATGAAATACAAAAGGCAATTTTCA TCAGTTTTCTTCAGTTTGCAGAGAAGAACACAGCACATATATTTGCACTGAAAGCCCTTACTAT CTCGAAGTGTTTCTTTATGTTCTTTCTACTCCTGATTAATCTGAATGCAAATGAAGTTGATCTA AGACATCTATTAGTAGGTAAAGAGCAATGTCCCCTTCAGCAATATCCTTCATGCATCTCCACTT AATTGCAACCATGAATATGAAATAGACAGTAAAAGTCCATACAAGGCTCAAATTTAGTTCGGTA GCCGACCAAGCTTCAAGGGATTGCCTAGTTGCAACGCTGTAATTTCCATATTCCTTATAAATGT CAACATC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.276601679

Conservation Information
Conserved circRNAs	NA
PMCS	0.276601679

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							17479832-17477137(+)
17479004-17477085(-)
						
					

						Potential amino acid sequence
						
							MSTSFNPLVLLTNPMSDSRSKN*(+)
MPTVNQREIFDRPPANMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWI
SKASAHQRRGRAGRVQPGACYRLYPKVIYDAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFL
AKALQPPDPLSVNNAIELLKTVGALDDVEELTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPAL
TIAAALAYRNPFVLPIDRKEEADAVKRSFAGDSCSDHIALVKAFEAWKEARRSGRERSFCWENF
LSPMTLQMMDDMRNQFFDLLSDIGFVSKTRGLKDVDIYKEYGNYSVATRQSLEAWSATELNLSL
VEGTIEYICRHEGEGAILVFLTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIF
DRPPANMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRG
RAGRVQPGACYRLYPKVIYDAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKALQPPDPL
SVNNAIELLKTVGALDDVEELTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRN
PFVLPIDRKEEADAVKRSFAGDSCSDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMD
DMRNQFFDLLSDIGFVSKTRGLKDVDIYKEYGNYSVATRQSLEAWSATELNLSLVEGTIEYICR
HEGEGAILVFLTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKI
VLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGAC
YRLYPKVIYDAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKALQPPDPLSVNNAIELLK
TVGALDDVEELTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVLPIDRKE
EADAVKRSFAGDSCSDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMDDMRNQFFDLL
SDIGFVSKTRGLKDVDIYKEYGNYSVATRQSLEAWSATELNLSLVEGTIEYICRHEGEGAILVF
LTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKIVLATNIAESS
ITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGACYRLYPKVIYD
AMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKALQPPDPLSVNNAIELLKTVGALDDVEE
LTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVLPIDRKEEADAVKRSFA
GDSCSDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMDDMRNQFFDLLSDIGFVSKTR
GLK(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	17479832-17477137(+) 17479004-17477085(-)
Potential amino acid sequence	MSTSFNPLVLLTNPMSDSRSKN*(+) MPTVNQREIFDRPPANMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWI SKASAHQRRGRAGRVQPGACYRLYPKVIYDAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFL AKALQPPDPLSVNNAIELLKTVGALDDVEELTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPAL TIAAALAYRNPFVLPIDRKEEADAVKRSFAGDSCSDHIALVKAFEAWKEARRSGRERSFCWENF LSPMTLQMMDDMRNQFFDLLSDIGFVSKTRGLKDVDIYKEYGNYSVATRQSLEAWSATELNLSL VEGTIEYICRHEGEGAILVFLTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIF DRPPANMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRG RAGRVQPGACYRLYPKVIYDAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKALQPPDPL SVNNAIELLKTVGALDDVEELTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRN PFVLPIDRKEEADAVKRSFAGDSCSDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMD DMRNQFFDLLSDIGFVSKTRGLKDVDIYKEYGNYSVATRQSLEAWSATELNLSLVEGTIEYICR HEGEGAILVFLTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKI VLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGAC YRLYPKVIYDAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKALQPPDPLSVNNAIELLK TVGALDDVEELTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVLPIDRKE EADAVKRSFAGDSCSDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMDDMRNQFFDLL SDIGFVSKTRGLKDVDIYKEYGNYSVATRQSLEAWSATELNLSLVEGTIEYICRHEGEGAILVF LTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKIVLATNIAESS ITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGACYRLYPKVIYD AMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKALQPPDPLSVNNAIELLKTVGALDDVEE LTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVLPIDRKEEADAVKRSFA GDSCSDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMDDMRNQFFDLLSDIGFVSKTR GLK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os10g0471350_circ_g.3

Address

Any questions?

Supported by