Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os07g0223100_circ_ag.5 |
ID in PlantcircBase | osa_circ_033235 |
Alias | Os_ciR2008 |
Organism | Oryza sativa |
Position | chr7: 6811889-6825005 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ag-circRNA |
Identification method | find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os07g0223100_circ_ag.1 Os07g0223100_circ_ag.2 Os07g0223100_circ_ag.3 Os07g0223100_circ_ag.4 Os07g0223100_circ_ag.6 Os07g0223400_circ_g.1 |
Support reads | 148 |
Tissues | root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | osi_circ_017662 sly_circ_000405 |
PMCS | 0.846460397 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |