Detailed infomation of each circRNA
General Information | |
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CircRNA Name | ENSRNA049471535_circ_igg.1 |
ID in PlantcircBase | osa_circ_002679 |
Alias | NA |
Organism | Oryza sativa |
Position | chr1: 24615785-24615990 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | igg-circRNA |
Identification method | circseq_cup |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os01g0618700_circ_ig.1 ENSRNA049471535_circ_igg.2 ENSRNA049471535_circ_igg.3 ENSRNA049471535_circ_igg.4 ENSRNA049471535_circ_igg.5 ENSRNA049471535_circ_igg.6 Os01g0618700_circ_ig.7 Os01g0618700_circ_ig.8 Os01g0618700_circ_ig.9 ENSRNA049471535_circ_g.1 ENSRNA049471535_circ_g.2 ENSRNA049471535_circ_g.3 ENSRNA049471535_circ_g.4 ENSRNA049471535_circ_igg.5 ENSRNA049471535_circ_g.6 ENSRNA049471535_circ_igg.7 |
Support reads | 18 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | TC-TA |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.804264222 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2016 |