Detail information of BGIOSGA033373_circ_g.2


General Information
CircRNA Name BGIOSGA033373_circ_g.2
ID in PlantcircBase osi_circ_002927
Alias 10:20022599|20022860
Organism Oryza sativa ssp. indica
Position chr10: 20022599-20022860  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ei-circRNA
Identification method find_circ
Parent gene BGIOSGA033373
Parent gene annotation NA
Parent gene strand +
Alternative splicing BGIOSGA033373_circ_g.1
Support reads NA
Tissues leaf
Exon boundary   No-No
Splicing signals   GT-AG
Number of exons covered BGIOSGA033373-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   ATCAACTGGGAAGAGTTTATTGCTGCAGCAGTGTCTCTTAATAAAATAGAACGTGAGAAACACT
TGATGGCAGCCTTTACATACTTTGACAAAGATGGAAtcggggccaacacattcatgtcaaaaga
ttacttaaaccattggtttagttgaaatggagtatgtcatgcatctgtgatgaaatactgtctt
cattgcag
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence TCGGGGCCAACACATTCATGTCAAAAGATTACTTAAACCATTGGTTTAGTTGAAATGGAGTATG
TCATGCATCTGTGATGAAATACTGTCTTCATTGCAGAACTGTTTTATATATTTTAACCTTTTTG
AGTACTACTTCAGGCTGATGACACCACCTCCACCATCAACTGGGAAGAGTTTATTGCTGCAGCA
GTGTCTCTTAATAAAATAGAACGTGAGAAACACTTGATGGCAGCCTTTACATACTTTGACAAAG
ATGGAA
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021