Plant Circular RNA Database

Detail information of Solyc01g100650.2_circ_g.8

			
						 General Information
					
						CircRNA Name
						Solyc01g100650.2_circ_g.8
					
						ID in PlantcircBase
						sly_circ_000402
					
						Alias
						1:82391790|82396561
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr1: 90630990-90635761  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc01g100650.2						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Solyc01g100650.2_circ_g.1 Solyc01g100650.2_circ_g.2 Solyc01g100650.2_circ_g.3 Solyc01g100650.2_circ_g.4 Solyc01g100650.2_circ_g.5 Solyc01g100650.2_circ_g.6 Solyc01g100650.2_circ_g.7 Solyc01g100650.2_circ_g.9 						
					
						Support reads
						6
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc01g100650.2.1:7

General Information
CircRNA Name	Solyc01g100650.2_circ_g.8
ID in PlantcircBase	sly_circ_000402
Alias	1:82391790\|82396561
Organism	Solanum lycopersicum
Position	chr1: 90630990-90635761 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	CIRI
Parent gene	Solyc01g100650.2
Parent gene annotation	protein_coding
Parent gene strand	+
Alternative splicing	Solyc01g100650.2_circ_g.1 Solyc01g100650.2_circ_g.2 Solyc01g100650.2_circ_g.3 Solyc01g100650.2_circ_g.4 Solyc01g100650.2_circ_g.5 Solyc01g100650.2_circ_g.6 Solyc01g100650.2_circ_g.7 Solyc01g100650.2_circ_g.9
Support reads	6
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc01g100650.2.1:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTGGGATCTCTGACTTTCAATTTTGGTGATTCTCTTCTTTCTCTTGTTTTTATTTTCGTGCAGT
TCTCAGAACCATCTGGAATTGTTGAAGCAGAAAATGggtcattgactttgtgaatgagacagtg
cggacgcttgcgggaaatggaacaaaaggttctgattatgaagggggaggaactggaactgcac
aggcaaga

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GGTCATTGACTTTGTGAATGAGACAGTGCGGACGCTTGCGGGAAATGGAACAAAAGGTTCTGAT
TATGAAGGGGGAGGAACTGGAACTGCACAGGCAAGATTGGATTAAATTAAATAATAACTTGGTC
ATCAACTGGTTCCAGTTAGCTCTAGCTTATCGCATATGTAGTTTTATGCTCTAATTTTATCTCT
CTTTAATCAATTTCAAATATATTGTGAATTATCCTTTTTTCCTTGGAACTGAACATCATTGGTC
ATATTTTCAGCTTCTCAACTCTCCATGGGATGTCTGCTTTGAACCTGAGAATGAAATTGTCTAC
ATCGCAATGGCTGGTCAGCATCAGATCTGGGAACACAAAACATTGGATGGAGTTACAAGAGCTT
TCAGTGGGAATGGTTATGAGAGAAATTTGAATGGCTCAAGGTAATGTGTGTGTGTTAGCTTAAC
TAGAGTTTCAGCAGAACACTGGTTAATTGTGCTAGTTTTTTATATGAGATTGAAGTGTAGTTTA
TTGATTAATTCTTAAATGCTATGATGCTCACTATCATCATCTGTTTGTCACACTTTCTTTTGTG
GTGCTTTTTACTTCTAAACTAGTTTCCAAGCCTTTTTGAAGAAAAGGGTTTCCCCCTTTTTATT
AGAAAAAAGATCCATGTGTTAATCTAGCGCGAGGGAGAACCAACTGAGGACCAGATCTTTCACT
GATAAACAAAGACAGAAACAAACTGCAGTTCACACTTTTTTGATTCACTGCTTTACACTTGCTC
TATAAATCTATCAGCGTAGTCATATTTTAGGACTGCATAGATATGTCTCTTCTTTTGACTTGCC
CGTGTTCTAAAAGATCTCTCATATTTATTAGTGATAACAGTAAGAGTTTTTATAGACTGCACTC
TTTTGGCATGGTAAGATCAATTTTCTTCTGAAGGTTCCATTATGAATTTGGAACCCATGTTCTG
TGGACTTCTAACATTATCATCTAACATAATTCATTGGAACATGAAGAGTACAAAAGCTAACCCA
CACTCAAAGGAATAGATATCCCTTTTGGTCATGAATCTTGATAATGTGCTCTGGATATGGTTAC
TATTACTTCCTAGTAACACTTGGTGAAAATAATGGATCTCCATGAATCAGCAGGAGCTTCAGTC
AAAAGACAACAGGGATTAAACTAATGTAATTTGGAGAGGAGAAACCGGCTTTGTGCTTTTAGTT
TTTGGGTTTTGACTTCTTTCATTGTATCTCTTGTCCTTGTATGTGTTGGTTGTGAGAACATATC
CTTTTAGCCACTTACTTTTGACGAACTTGCTGATGTTTACGGATCATCTTCTTCTTGGCCATGG
GAAAGCTCTACAAGCACGTCATTTGCACAACCTTCTGGGATTTCCTTGTCACGAGGTAATCTCT
TAACAAGACATAAATTGTTCTTTTGAACTGGTCTATAGTTTTTACCTTTTCTTTTGATACAATT
TGTTTTACTTTTTATTTTTCTTTTTGATTGTTAGAGCTCAGTATATTATATCTGTATGCTGATC
AAAAAATTAATTTAGCAATAAGAGAATGCTGTAAAATAAGTACAAAAGGAGGCTACATTACAAA
TTATGTAATGAGCTCATGAAGTGAATCATGGCATCTATGTCAGTTGCAATAGCCAGATTGCACC
AAAAAAAAAGAAGAAGATATAAGTATTTGATACTAATTACAGATTCAGATTCTCTCTCAAAAAC
TCTGGCATTCTTTTCTTTCCAAATTAGTCCACCATATATTTGAAGTTTTCCTCTTCACCTTGCC
AAGACCTTTCAAGTTGCCAGCATTTAATTACCCATTTACTTGTTTTTTTGTAGATCTTAAGGAG
GCATATATTGCTGACAGTGAGAGTAGCTCCATTCGGGCAGTTAATCTAAGAACAGGAGGTTCAA
GATCACTGGCTGGTGGTGATCCAGTTATTGCAGAAAACTTGTTTAGGGTAATTTTGTTTGAAGC
CAAAGAAACCAGATTTGCATTTCTCTAGTATATTTTAGTCACATTTGTGACAGAAATAAATTTG
TTAAAGGAACATTTTTTGTGCAGTTCGGTGACCATGATGGAATAGGCTCTGAAGTACTTCTTCA
ACATCCATTAGGTGTTTTATGTGGAAAGGATGGTCAAGTTTATATTGCAGATTCTTATAATCAC
AAGGTACTTGCAGACTAATTTTTTAACAGTTAACATTTGCTCCATATGTGACACAATTTTATGA
CATCTTATGATAATCTTTAACACACTTCTCCACATATTATAATTAATTTAGTTTGAACTATGAT
GTGATGTTCATTTGTCAAACTTAACTTCTCAATCACTGTAATATGTGCTTCTACTATTATCAAC
ATATTATTCAAGTGGAAAAGACCAAACAGATATGCTTTGAGAAGACAGACCTCCAATGGAAGAA
ATACTAAATGTATGCAGTTAACCTGATGCTATTTGCTTTGATTGCCTAACTCCTATCTTAAGTT
CTTTTTTTTTTTTTTTTTGTATGTGAGCCATGAATGTACAAATTTGTGATTTTTAAAACATATT
AGTCATCTGCAGTCTCCCTATAGCTTTGTTTCATCATTCACTCTCTCTACCTCCATAAGAACTT
TTTATTTTGGTACAACACATTTGGTTTTCTTTTTCAAACATTATCTGGATGGTCATAAATTATC
TCTAGTTATTTGAACTTGATAGAAGATTTTCGTTTATAACTTACACCTTTGTGTTTAAAAATCT
TTTTGTGATTTGGTGGGTTTATGAAAAGTGAAGGAGGAGAAGATAAAAGTGAGAAGGGCCTTTG
GGAAGATTGAAACCATGTGGTGAAGGTTGATAGGAGGGTTAATAGCATGTCATCTTACAATTAA
TATCAAGGCGACAATTTGTCAATAATGTTATGATTGAGATATCAAAGCTAATAAAGATTAGTCT
GCTTAACCAGAAATTGGCTTAGTCTGCTTAACTAGAAATTGGCACTTTGGAAGAATTTTGACAA
ATCATCTAATTTATTAAGACAAAAATTTTATCTGCTGAAATTGTGGTGCCTTATTCCAGATAAG
AAACAGTTGCTCGTACGTAGAATAATAGTGAAGTATTAGGTTTATGAAGTTTGTGGCCTTCCCT
GCTTCTCCTTTCAAAATCAACTAGTGAGCTTGAAAAGCGATGTTTCATATGATGCTTGTTACGA
TTTCAAGCTTAAAAGGACTATTTAATGTAACTTATATTTCAATAATGAACTACTTGTTTTGGTA
CCGTCACAGAAACATCTCAGGTAAGTAAAAACTTTCCTCTTTTGTTTAACTTGCCAGATTAAGA
AACTAGATCCAGATAGTAAAAGGGTGACTACATTAGCTGGTGTTGGTCAGGCTGGTTTCAAAGA
TGGAGCAGCGGTGGCAGCTCAGGTTGGAAAGAGTTCATATATCTTTTCTTGTATCATATTTTGG
ACATTAGTGTTACATTCTGACATTCATTGCTCCCAGTCATATTTTATGTCCACATGGATGTTAC
ACTTAATAGCATTAGCATGGAAATGAGTACCTAGACCATATTATTTCTCCAACTTGATGGACAT
AATAAGCTGCTGACACATGAATAATTTGAATCCTGCATAGCATTTTCTAAAATATGTGGCTGCA
TCTGTAAACAACCTATTTAGTTATAAGCCCTTATACACGTGCAGCATACCAAACATTTTCTACG
TAAATTTCATCATCAATCAGCAGTAGCATGTGAGGTGATTGTCTTTGGCAACAAATGTTTGGTA
TTTCTCTTCTTTTTTTTCCTTTTTCTTTATTTCAAGTGGATCCTGCACCCAATGTGTAAAGGAG
AAAGGAAAATAAGGAACAGAAGCAAGTTGCCAAGGATATGATTGAAACACTTTATTGAGGCATA
TGAGTGTACCCTTGGGTAAATCCAGCATGGATAAATATATCAAAGATTTTTCGTCTTCGGAAAT
TGTTTTAACCTTTTATTTAAGCTTGTAGATGCTAGGAAAAACTTTGGAACGTTCTGTACAAAGA
TAAGTATGAACTTGATCTGTATTAGATTTGTATATTTAGGAAGGCTGCGCAGTTTCTTCAAAAC
AAAAGTGGTGTAACAATCAATAAAAGCTGCTTGTAATGGTATGGGAGAAATGGATGTCAGATTC
CTGATTTTAAAATATTGTTTCGAAAATTCTGTTTGAATCTTTTACTATAAATCAAATTTCTTTT
AGCTACTTATGAATGTAATATTACGAAAGTAAAAAATTGCTACTTTTTTAAAAAAGTCGGACTA
CAATTACTGCTATTTTCTCTCTCCACTTGAAATTGGTGCATTATTTTGTGTTGTTGTGGTTGGG
GGTTAATGCAAAGGTTGTGTTGAACAAAGAGGGAGAAGGCACCCCCATTTGGGAAATAAGTCCT
AGATTGTATGCAATAAGATACTGGCTAAAAGAGCATTGCTTTCTACAAAGAGCACCCAATCTGC
ACAAAACTATTGTTACTTTTATATGGAAAGATCCTTTCCACCAACCAGGAACAAAATTTTACCT
TATTAAAGGAGAAAAAGAAAAAGGAGTCTTACTGTTTTTTCCTTTTGAACCTTCAATTTACATG
TGCGAAGTATAATTTTCTTCTTGATTCTTGAATCTTCCATTCTTAAGAGAAATTGCTTTTACTA
CTGGGATCTCTGACTTTCAATTTTGGTGATTCTCTTCTTTCTCTTGTTTTTATTTTCGTGCAGT
TCTCAGAACCATCTGGAATTGTTGAAGCAGAAAATG
						
					

			
		

Sequences
Splice junction sequence	CTGGGATCTCTGACTTTCAATTTTGGTGATTCTCTTCTTTCTCTTGTTTTTATTTTCGTGCAGT TCTCAGAACCATCTGGAATTGTTGAAGCAGAAAATGggtcattgactttgtgaatgagacagtg cggacgcttgcgggaaatggaacaaaaggttctgattatgaagggggaggaactggaactgcac aggcaaga
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GGTCATTGACTTTGTGAATGAGACAGTGCGGACGCTTGCGGGAAATGGAACAAAAGGTTCTGAT TATGAAGGGGGAGGAACTGGAACTGCACAGGCAAGATTGGATTAAATTAAATAATAACTTGGTC ATCAACTGGTTCCAGTTAGCTCTAGCTTATCGCATATGTAGTTTTATGCTCTAATTTTATCTCT CTTTAATCAATTTCAAATATATTGTGAATTATCCTTTTTTCCTTGGAACTGAACATCATTGGTC ATATTTTCAGCTTCTCAACTCTCCATGGGATGTCTGCTTTGAACCTGAGAATGAAATTGTCTAC ATCGCAATGGCTGGTCAGCATCAGATCTGGGAACACAAAACATTGGATGGAGTTACAAGAGCTT TCAGTGGGAATGGTTATGAGAGAAATTTGAATGGCTCAAGGTAATGTGTGTGTGTTAGCTTAAC TAGAGTTTCAGCAGAACACTGGTTAATTGTGCTAGTTTTTTATATGAGATTGAAGTGTAGTTTA TTGATTAATTCTTAAATGCTATGATGCTCACTATCATCATCTGTTTGTCACACTTTCTTTTGTG GTGCTTTTTACTTCTAAACTAGTTTCCAAGCCTTTTTGAAGAAAAGGGTTTCCCCCTTTTTATT AGAAAAAAGATCCATGTGTTAATCTAGCGCGAGGGAGAACCAACTGAGGACCAGATCTTTCACT GATAAACAAAGACAGAAACAAACTGCAGTTCACACTTTTTTGATTCACTGCTTTACACTTGCTC TATAAATCTATCAGCGTAGTCATATTTTAGGACTGCATAGATATGTCTCTTCTTTTGACTTGCC CGTGTTCTAAAAGATCTCTCATATTTATTAGTGATAACAGTAAGAGTTTTTATAGACTGCACTC TTTTGGCATGGTAAGATCAATTTTCTTCTGAAGGTTCCATTATGAATTTGGAACCCATGTTCTG TGGACTTCTAACATTATCATCTAACATAATTCATTGGAACATGAAGAGTACAAAAGCTAACCCA CACTCAAAGGAATAGATATCCCTTTTGGTCATGAATCTTGATAATGTGCTCTGGATATGGTTAC TATTACTTCCTAGTAACACTTGGTGAAAATAATGGATCTCCATGAATCAGCAGGAGCTTCAGTC AAAAGACAACAGGGATTAAACTAATGTAATTTGGAGAGGAGAAACCGGCTTTGTGCTTTTAGTT TTTGGGTTTTGACTTCTTTCATTGTATCTCTTGTCCTTGTATGTGTTGGTTGTGAGAACATATC CTTTTAGCCACTTACTTTTGACGAACTTGCTGATGTTTACGGATCATCTTCTTCTTGGCCATGG GAAAGCTCTACAAGCACGTCATTTGCACAACCTTCTGGGATTTCCTTGTCACGAGGTAATCTCT TAACAAGACATAAATTGTTCTTTTGAACTGGTCTATAGTTTTTACCTTTTCTTTTGATACAATT TGTTTTACTTTTTATTTTTCTTTTTGATTGTTAGAGCTCAGTATATTATATCTGTATGCTGATC AAAAAATTAATTTAGCAATAAGAGAATGCTGTAAAATAAGTACAAAAGGAGGCTACATTACAAA TTATGTAATGAGCTCATGAAGTGAATCATGGCATCTATGTCAGTTGCAATAGCCAGATTGCACC AAAAAAAAAGAAGAAGATATAAGTATTTGATACTAATTACAGATTCAGATTCTCTCTCAAAAAC TCTGGCATTCTTTTCTTTCCAAATTAGTCCACCATATATTTGAAGTTTTCCTCTTCACCTTGCC AAGACCTTTCAAGTTGCCAGCATTTAATTACCCATTTACTTGTTTTTTTGTAGATCTTAAGGAG GCATATATTGCTGACAGTGAGAGTAGCTCCATTCGGGCAGTTAATCTAAGAACAGGAGGTTCAA GATCACTGGCTGGTGGTGATCCAGTTATTGCAGAAAACTTGTTTAGGGTAATTTTGTTTGAAGC CAAAGAAACCAGATTTGCATTTCTCTAGTATATTTTAGTCACATTTGTGACAGAAATAAATTTG TTAAAGGAACATTTTTTGTGCAGTTCGGTGACCATGATGGAATAGGCTCTGAAGTACTTCTTCA ACATCCATTAGGTGTTTTATGTGGAAAGGATGGTCAAGTTTATATTGCAGATTCTTATAATCAC AAGGTACTTGCAGACTAATTTTTTAACAGTTAACATTTGCTCCATATGTGACACAATTTTATGA CATCTTATGATAATCTTTAACACACTTCTCCACATATTATAATTAATTTAGTTTGAACTATGAT GTGATGTTCATTTGTCAAACTTAACTTCTCAATCACTGTAATATGTGCTTCTACTATTATCAAC ATATTATTCAAGTGGAAAAGACCAAACAGATATGCTTTGAGAAGACAGACCTCCAATGGAAGAA ATACTAAATGTATGCAGTTAACCTGATGCTATTTGCTTTGATTGCCTAACTCCTATCTTAAGTT CTTTTTTTTTTTTTTTTTGTATGTGAGCCATGAATGTACAAATTTGTGATTTTTAAAACATATT AGTCATCTGCAGTCTCCCTATAGCTTTGTTTCATCATTCACTCTCTCTACCTCCATAAGAACTT TTTATTTTGGTACAACACATTTGGTTTTCTTTTTCAAACATTATCTGGATGGTCATAAATTATC TCTAGTTATTTGAACTTGATAGAAGATTTTCGTTTATAACTTACACCTTTGTGTTTAAAAATCT TTTTGTGATTTGGTGGGTTTATGAAAAGTGAAGGAGGAGAAGATAAAAGTGAGAAGGGCCTTTG GGAAGATTGAAACCATGTGGTGAAGGTTGATAGGAGGGTTAATAGCATGTCATCTTACAATTAA TATCAAGGCGACAATTTGTCAATAATGTTATGATTGAGATATCAAAGCTAATAAAGATTAGTCT GCTTAACCAGAAATTGGCTTAGTCTGCTTAACTAGAAATTGGCACTTTGGAAGAATTTTGACAA ATCATCTAATTTATTAAGACAAAAATTTTATCTGCTGAAATTGTGGTGCCTTATTCCAGATAAG AAACAGTTGCTCGTACGTAGAATAATAGTGAAGTATTAGGTTTATGAAGTTTGTGGCCTTCCCT GCTTCTCCTTTCAAAATCAACTAGTGAGCTTGAAAAGCGATGTTTCATATGATGCTTGTTACGA TTTCAAGCTTAAAAGGACTATTTAATGTAACTTATATTTCAATAATGAACTACTTGTTTTGGTA CCGTCACAGAAACATCTCAGGTAAGTAAAAACTTTCCTCTTTTGTTTAACTTGCCAGATTAAGA AACTAGATCCAGATAGTAAAAGGGTGACTACATTAGCTGGTGTTGGTCAGGCTGGTTTCAAAGA TGGAGCAGCGGTGGCAGCTCAGGTTGGAAAGAGTTCATATATCTTTTCTTGTATCATATTTTGG ACATTAGTGTTACATTCTGACATTCATTGCTCCCAGTCATATTTTATGTCCACATGGATGTTAC ACTTAATAGCATTAGCATGGAAATGAGTACCTAGACCATATTATTTCTCCAACTTGATGGACAT AATAAGCTGCTGACACATGAATAATTTGAATCCTGCATAGCATTTTCTAAAATATGTGGCTGCA TCTGTAAACAACCTATTTAGTTATAAGCCCTTATACACGTGCAGCATACCAAACATTTTCTACG TAAATTTCATCATCAATCAGCAGTAGCATGTGAGGTGATTGTCTTTGGCAACAAATGTTTGGTA TTTCTCTTCTTTTTTTTCCTTTTTCTTTATTTCAAGTGGATCCTGCACCCAATGTGTAAAGGAG AAAGGAAAATAAGGAACAGAAGCAAGTTGCCAAGGATATGATTGAAACACTTTATTGAGGCATA TGAGTGTACCCTTGGGTAAATCCAGCATGGATAAATATATCAAAGATTTTTCGTCTTCGGAAAT TGTTTTAACCTTTTATTTAAGCTTGTAGATGCTAGGAAAAACTTTGGAACGTTCTGTACAAAGA TAAGTATGAACTTGATCTGTATTAGATTTGTATATTTAGGAAGGCTGCGCAGTTTCTTCAAAAC AAAAGTGGTGTAACAATCAATAAAAGCTGCTTGTAATGGTATGGGAGAAATGGATGTCAGATTC CTGATTTTAAAATATTGTTTCGAAAATTCTGTTTGAATCTTTTACTATAAATCAAATTTCTTTT AGCTACTTATGAATGTAATATTACGAAAGTAAAAAATTGCTACTTTTTTAAAAAAGTCGGACTA CAATTACTGCTATTTTCTCTCTCCACTTGAAATTGGTGCATTATTTTGTGTTGTTGTGGTTGGG GGTTAATGCAAAGGTTGTGTTGAACAAAGAGGGAGAAGGCACCCCCATTTGGGAAATAAGTCCT AGATTGTATGCAATAAGATACTGGCTAAAAGAGCATTGCTTTCTACAAAGAGCACCCAATCTGC ACAAAACTATTGTTACTTTTATATGGAAAGATCCTTTCCACCAACCAGGAACAAAATTTTACCT TATTAAAGGAGAAAAAGAAAAAGGAGTCTTACTGTTTTTTCCTTTTGAACCTTCAATTTACATG TGCGAAGTATAATTTTCTTCTTGATTCTTGAATCTTCCATTCTTAAGAGAAATTGCTTTTACTA CTGGGATCTCTGACTTTCAATTTTGGTGATTCTCTTCTTTCTCTTGTTTTTATTTTCGTGCAGT TCTCAGAACCATCTGGAATTGTTGAAGCAGAAAATG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.153956744

Conservation Information
Conserved circRNAs	NA
PMCS	0.153956744

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							90631317-90631003(+)
90634382-90630995(+)
90631332-90634402(-)
90630997-90634377(-)
						
						Potential amino acid sequence
						
							MAGQHQIWEHKTLDGVTRAFSGNGYERNLNGSSSTSTSFAQPSGISLSRDLKEAYIADSESSSI
RAVNLRTGGSRSLAGGDPVIAENLFRFGDHDGIGSEVLLQHPLGVLCGKDGQVYIADSYNHKIK
KLDPDSKRVTTLAGVGQAGFKDGAAVAAQFSEPSGIVEAENGSLTL*(+)
MEQRWQLSSQNHLELLKQKMGH*(+)
MLTSHCDVDNFILRFKADIPWRVEKLCSSSSSPFIIRTFCSISRKRPHCLIHKVNDPFSASTIP
DGSEN*(-)
MTHFLLQQFQMVLRTELPPLLHL*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	90631317-90631003(+) 90634382-90630995(+) 90631332-90634402(-) 90630997-90634377(-)
Potential amino acid sequence	MAGQHQIWEHKTLDGVTRAFSGNGYERNLNGSSSTSTSFAQPSGISLSRDLKEAYIADSESSSI RAVNLRTGGSRSLAGGDPVIAENLFRFGDHDGIGSEVLLQHPLGVLCGKDGQVYIADSYNHKIK KLDPDSKRVTTLAGVGQAGFKDGAAVAAQFSEPSGIVEAENGSLTL(+) MEQRWQLSSQNHLELLKQKMGH(+) MLTSHCDVDNFILRFKADIPWRVEKLCSSSSSPFIIRTFCSISRKRPHCLIHKVNDPFSASTIP DGSEN(-) MTHFLLQQFQMVLRTELPPLLHL(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Yin et al., 2018

circRNA

Detail information of Solyc01g100650.2_circ_g.8

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