Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT5G25610_circ_g.11 |
ID in PlantcircBase | ath_circ_040408 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr5: 8915921-8916009 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | circRNA_finder, circseq_cup, CIRI-full |
Parent gene | AT5G25610 |
Parent gene annotation |
BURP domain protein RD22 |
Parent gene strand | - |
Alternative splicing | AT5G25610_circ_g.1 AT5G25610_circ_g.2 AT5G25610_circ_g.3 AT5G25610_circ_g.4 AT5G25610_circ_g.5 AT5G25610_circ_g.6 AT5G25610_circ_g.7 AT5G25610_circ_g.8 AT5G25610_circ_g.9 AT5G25610_circ_g.10 |
Support reads | 3 |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT5G25610.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.200410924 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |