Splice junction sequence |
ACAAGTTATTATCTGATACCTCTCTTAAAACAGGAAACTGGAAATTCCTTGCAAGTTCTAATCC TTTGCATACTTCATAGAAGGCAGAAAGGTTGCCAGCcagctgtctctctgtggctgcagatata tcattgctaggtgttgtgaccaacgcaagctcccatcctgacggatccaaatctcttgcttgcc caaaacta
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 540 Transcript exons: 5140801-5140916,5141005-5141083,5141172-5141354,5141445- 5141525,5141616-5141696 CAGCTGTCTCTCTGTGGCTGCAGATATATCATTGCTAGGTGTTGTGACCAACGCAAGCTCCCAT CCTGACGGATCCAAATCTCTTGCTTGCCCAAAACTAAACGGCGAAGAATCAACATCATTGGAAA CTAAGGCCAAAGCTAGTGCATTTTGGTCCAGGATTGCTAACGGATCAGGTGTATCATCATGCAG ACCCAATAGATCATCAGTATCAATGAAGTTCTGTGGAGTTTCTACTGAAGGAGGAGACTGGGAA GAAAGTTGCGTTTCTTCAGAGGGAACAACGGCACTATCTGAAGGCGATGATGTTTCATGTTCTT CATGTGAAGGTCCAACATCTTCAGAAGTAAGACCATCATCAGGCGTATAGGTCAGAAGCAGTGG CCCAGATGTGACGTCGACCATCTGAGGTGCGTCTCTCATATATTCCTCCATTGTTGTAAGAAAA GATTGTGGAGGCTCTCTTAAAACAGGAAACTGGAAATTCCTTGCAAGTTCTAATCCTTTGCATA CTTCATAGAAGGCAGAAAGGTTGCCAGC
|
Genomic sequence |
CAGCTGTCTCTCTGTGGCTGCAGATATATCATTGCTAGGTGTTGTGACCAACGCAAGCTCCCAT CCTGACGGATCCAAATCTCTTGCTTGCCCAAAACTAAACGGCGAAGAATCAACTGGAAACAGAA ACATAACCAGAATTGCGACTAAAGACAAGCAAGAAAGGCAAACTTAGAGCTCCAGTACATAGAC CAAGAAGCTCACCATCATTGGAAACTAAGGCCAAAGCTAGTGCATTTTGGTCCAGGATTGCTAA CGGATCAGGTGTATCATCATGCAGACCCTGTGTGTAATACTGAGAGAATCAGAGACAAAAGGAT AACAATGACAGAATAAAGAAATCAAGACCATATGTAATAAGCATAATTTACCAATAGATCATCA GTATCAATGAAGTTCTGTGGAGTTTCTACTGAAGGAGGAGACTGGGAAGAAAGTTGCGTTTCTT CAGAGGGAACAACGGCACTATCTGAAGGCGATGATGTTTCATGTTCTTCATGTGAAGGTCCAAC ATCTTCAGAAGTAAGACCATCATCAGGCGTATAGGTCAGAAGCTGTATGTTGACAAAGTTTTTA GAAATAAGTTATAAAAGAAAAATCATGGTTTCTGTAGGAGTAGGACCACAATGAGAGTATATAT GTACCAGTGGCCCAGATGTGACGTCGACCATCTGAGGTGCGTCTCTCATATATTCCTCCATTGT TGTAAGAAAAGATTGTGGAGGCTTGAAAAAAACAAAAATAGACTTATTTAGTATTGATAAAGTA CCTGCCATCACAAATTTAAATGTAACAAACAAGTTATTATCTGATACCTCTCTTAAAACAGGAA ACTGGAAATTCCTTGCAAGTTCTAATCCTTTGCATACTTCATAGAAGGCAGAAAGGTTGCCAGC |