Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT2G03140_circ_g.3 |
ID in PlantcircBase | ath_circ_012645 |
Alias | At_ciR4332, Ath_circ_FC1148 |
Organism | Arabidpsis thaliana |
Position | chr2: 948567-948877 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ, CIRI-full |
Parent gene | AT2G03140 |
Parent gene annotation |
alpha/beta-Hydrolases superfamily protein |
Parent gene strand | + |
Alternative splicing | AT2G03140_circ_g.1 AT2G03140_circ_g.2 |
Support reads | 3 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT2G03140.12:1 AT2G03140.5:1 AT2G03140.2:1 AT2G03140.9:1 AT2G03140.3:1 AT2G03140.1:1 AT2G03140.11:1 AT2G03140.8:1 AT2G03140.7:1 AT2G03140.10:1 AT2G03140.4:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.183288049 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ye et al., 2015;Chen et al., 2017a |