Plant Circular RNA Database

Detail information of BGIOSGA007202_circ_g.3

			
						 General Information
					
						CircRNA Name
						BGIOSGA007202_circ_g.3
					
						ID in PlantcircBase
						osi_circ_003626
					
						Alias
						2:1553397|1557752
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr2: 1553397-1557752  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA007202						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							BGIOSGA007202_circ_g.1 BGIOSGA007202_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA007202-TA:8

General Information
CircRNA Name	BGIOSGA007202_circ_g.3
ID in PlantcircBase	osi_circ_003626
Alias	2:1553397\|1557752
Organism	Oryza sativa ssp. indica
Position	chr2: 1553397-1557752 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA007202
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	BGIOSGA007202_circ_g.1 BGIOSGA007202_circ_g.2
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA007202-TA:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CAAGCAAGAATCCCCAGTATGCAAAGCCCCATTTGCAGGGGCATGAACAGACTGATCAATATCC
ATAGCCATACTGCCGGCATATTTGTTAGCAGAACCCctttctttcaatagctcatgttctccat
ttgaaagggctgtgtcatattccatctgtgacgcaaggacttccatgatcaactccaagaaatt
ggcaccac

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTTCTTTCAATAGCTCATGTTCTCCATTTGAAAGGGCTGTGTCATATTCCATCTGTGACGCAA
GGACTTCCATGATCAACTCCAAGAAATTGGCACCACGGACAGTAACTGGACCTAGAAGCACTTC
ATACCCCAATTTGCCACTTGAAGCTATATATGCTAACAGAGTGACAACTACCCGACAAAGCTTG
ATCCCCTGAAAATAATAGTTTTCTTAGTTGTCCAGTGTTGGAAGTAAAATGTAACAGTAGAACT
TATGTCATCTTTTGTTTCTCTCTAGAACTCCAGCTTTAAAACCTTTAAGAAATACCATGCAACA
CCTTTTTTTCAAAGAATGGCAAGTAACAATATTACTATTTTTCAATATATGCAGTCTATGTTCT
TAATAATATGGAAGTTAGCCTTCAATCTAAACATCTAAATGAAAATATACGGTCTGGAAGAGGA
GCAACATACCAGAGAACTTGTTGCCCTACAACTCAAGCATTCAGATAGGTCCTTAAAAATTGAG
CTTATAGCTTCTTGTGATCTATCATTTTCACATCTTATAGCTTCAATCTGCTCAGGGCTATCTT
TACCTCCATTGCATAGCAACTTCAATGTCGTTGGGCCTACCAGCAACAGGAAATCCAGATATCG
GTAAAGAGAGAAAACAAAGTAACAGAAAGGTAAAGGTTTTATCTTCAAAATGGAAAATAAATAC
TCTCCTTCCCAAATTGATCATCATATAGTGGAAACTAAAATTTCTCAAATTGATCATATAACCA
CATGGACACAGATTTCATCGGAGTACAATCAATACAGCACGGGAGAATGTGTGCATGCTAAAGG
GTGTAATTGTGCATTGTGTTTTAATCGATGCATGCATTGTGGGAGAATGTGTGCATATTGTGCA
TGACATCTTGATTGATGCTGTTTAAATTATCCTTGGTCTTGGTGCACAAACGGATGATCAATTT
GGGATGGAGGGAGTATGATTTATGACCCCAAAACATCCAGTATTCCAATAGGAATAGACTTGAA
AAGAAATATATATGTTATTTCTTGGAGCACATTTTTTTAACAGGTATATAGACTGAACAAGATC
TAATTAAATCCTGGCCAAGCAGCCAAGCTAGCAACAAGACTTTGCAAAAGGGCAGAATTAAGTT
CGAGAAGTTGCAAGGGTCCAGACTCCAGATCACCATTTTGCATTTTGCATGCATTTAATGCACC
AGTTATTGTCTGATGAAGCGTTTCTGTAGCTATATTCTCTAATACTTTAAATATTTGAGTTGGT
GGTGGTTGATAGTCAATAACTAAACATGAATCGAATTCCACTGCAATAGATGGGCACATTTCAA
GCTCACCAATAAAACAGAGCTATGGAGAAAAAAGAGCCAGTATAACAGGTATTCTACCAGAGGA
AGTGAAGCATTCATTTAGCCTTTAAAAATTCTTGAAACGACACATTCATTTCTAAAACTAATAC
TAAGTATATATAAGCCTGACAACTTACAATTCAATAGCAAGAAAAGTAGATCCACAGAATGCTT
CTTAACAAGCAATCCATTTTCCTTCTGCAACAGTTGATGCAATTTTTCCATTACAGAAGTAAAT
CCGAATCTGAAAGTAGCAGCACATTATCATTAGCGTAAAGCATTGCAACCGATTAAAGAAAGAA
ATAATACTCATGTGATTGCTTACTTTTCCCGCTCCACTTTGGGATCACTTGTCCTTGCAATGAT
AATCATTATAGATAATGCATCAACACGAATATTCTCCTCTGAATGCCTGTCCGCAATTTGTAGC
ATTGCAGTGAAGAGTGAAGTCCAGACTGTAAAAGGAAGCTGTGTGTTTTCAGTGTGAAGCCCAT
CATGGCTTCTTGATAGACTCGATGCATCAGGTGTATTCAGCGAAGTGGAGCTACCTTTGTGACT
GTTCCGCTCCATGTGAACAGTATTGTTAACACATGGCTCAATAGAAACATTATTCCTGATGTTA
CACTGAGGAAAATCGTATTAAAGTTCATAAGCATGAGAACCTATCATTATAAACAAGGAAAAAA
TAATGAACAATCGTATTATTGTATATACCCACGTTCTTGTTGTATTGCTGCCTATGTCAAATAC
TTGGTTGATTACAAGGCATCTACAAAATAAAAACCCACCCCACCCAATTCTCTCAGAAATAACA
AATACAATGGAACAGAAAACAAAGACAATTCACCGTGCTAAATCAATATCAATATCTATTAATA
TTTCTCAACATTTATCTGATACTACTTTATTTCTACTATGCAGTGATTGATTGCTCAGCCTGGA
TGAAGATAGCAGCCCACAAAAATTGCTCGAAGCACAGCTGGTCAGTTAACAACTATACCTTCCA
AGGCATGCACATTGTAAGAATCAAACTCTAGTTTTGCCAACAATTAGGCTAACTGATTTAGTGA
CACTAAGGTGATACTGCCAGATTTGTATTTAAATGTACTTTCATTTTCTCATGATTTTAGAATT
AAAAGATAGCATTTTCCAAGAGAGATTTATGGTCAAAGTTCAATTCAAGCAATACAAAACTGAA
CTGACTGGTAGGTTACAGAAGAGAACATTGGTAAGGTATTGAATGCAATAGTAGCTGCTATTCT
ATAAGATAAGGTTGGCTGGTCAATATCTGAGTTCAGTGACGAATCCAATTATGAAATACACTTC
CATGGTAACTAGAACCATATTCAATGTAGTAGTAAAGCATACCTCTGATTAGACATCGTTCTGT
TATTCAGCAAGTGCTGCAAGACACTATGTAACATCCGCAGGGCTCTACTAACAACAGCATCCTG
AAAAAAAAACAGTAGGTAAAAATGATAATTAAGTCCAAGGAATAAGAGTAATTGCCTAATTGGA
AAATTGACTGGTTCAATTCAGCATCCACAACACACACACACACACACTACAGAAAAACAACCAT
GACAATAGATCACAAATAAAAGCCTACTTCAGCTTAGATAGTTACTGTATGTCCAACAAACTCA
ACCTAAAGTTACTGTATGTCCAACAAACTCAACCTAAAGCCATGTAAGTTTGCATGTGAGAAGC
TATTGTTACTAGTTCTTCAAATAAATCAGCAAGCTAACTGATTCTCAGCCGGCTAGATATTTCC
ACAAGTATATGATGAAACTTGGTTTGAAACTGATCTGAGTAATTCTGACTTCCTTGCATAATAG
GAAGCACTAAAATTGGGTTGTCCCGAATGCCGCATCTATTTTTTCTAGACCTAGTGGGGAAGCC
CATAATCATAGACCTGAGAAATGTACTACAAATGGTAATGCAATGTAAATGACTATATAAGCAT
GTAAATGAAGTTGGATAATCAGTTCATACATTACCAACAGCAGCCAAATTTAGCAATGCTTCGA
GAAGAGTTTGTATAGGTATTGTATCACTGCTCGTCTGCAGGGACAAAACAGATAATTTGACAAT
GTGAAACATTAATTCAAATAAAATAGAGTAACATGGAATGAAAAACTAAAAGTAAAGTAGAGAA
CACTCTAACTACAGTATATGGAGATGAATGCATTGTCCCTATTCAATGTTGAAATCTAGTGCAG
ACTACAGAGAAGATAGTCCGTTCAAGCTGAAGTTTTTGCCTTGATTAGTAAAAGTTCAAATTCC
ACAAAATAGATGGTCAGTTCAAGCTGAAGCAGAGGAAAATTAAAAATAAATGTATATTTTCTAT
CTTTGGCATGTCTATTACCTTTATGATGATATCATATACTTGGGAAATAGCATTTCTGACCGAT
GAGCTCGCTTCAGAAGAGGCTTCACACTTGTCTAGCGATCCCGTAGACTGGACAAGTGTCAAAA
TTTCTTCTGAGCAAGAAACCAGGATCTTTGATATCAGACTCCTCCCCATCAAACTGTTAGTTGG
CATGCCCCACACTGCACACAGATTGCTAGAGATACGGTCAACCAATACTTTCTTGTGCTCAAGA
TATTCGTTATTCCCTGGAAGATCTGTCTGAACCCCTACAGTCTTGATTTCCTTGTGTTTGCTGC
CTTTTGATTCAAAGCGAACACTTTCCTAGCAATCACAGCAGAATAGATCACTAATGGAATATGC
TAGCACCATATAATAGAAAGCAATGTGCCCAGGCAAGACAAGCTACCTCCAAGACCTCAGATGC
ATATGTTTGATTCCTTTGGTTCAAACAGAGACCGTCTTGAGGGGAACTGAGCTCCTTGTTTCTA
CCATTTAATGTCTCTGCTCTTCTCGTGGATGCCAAGCAAGAATCCCCAGTATGCAAAGCCCCAT
TTGCAGGGGCATGAACAGACTGATCAATATCCATAGCCATACTGCCGGCATATTTGTTAGCAGA
ACCC
						
					

			
		

Sequences
Splice junction sequence	CAAGCAAGAATCCCCAGTATGCAAAGCCCCATTTGCAGGGGCATGAACAGACTGATCAATATCC ATAGCCATACTGCCGGCATATTTGTTAGCAGAACCCctttctttcaatagctcatgttctccat ttgaaagggctgtgtcatattccatctgtgacgcaaggacttccatgatcaactccaagaaatt ggcaccac
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTTCTTTCAATAGCTCATGTTCTCCATTTGAAAGGGCTGTGTCATATTCCATCTGTGACGCAA GGACTTCCATGATCAACTCCAAGAAATTGGCACCACGGACAGTAACTGGACCTAGAAGCACTTC ATACCCCAATTTGCCACTTGAAGCTATATATGCTAACAGAGTGACAACTACCCGACAAAGCTTG ATCCCCTGAAAATAATAGTTTTCTTAGTTGTCCAGTGTTGGAAGTAAAATGTAACAGTAGAACT TATGTCATCTTTTGTTTCTCTCTAGAACTCCAGCTTTAAAACCTTTAAGAAATACCATGCAACA CCTTTTTTTCAAAGAATGGCAAGTAACAATATTACTATTTTTCAATATATGCAGTCTATGTTCT TAATAATATGGAAGTTAGCCTTCAATCTAAACATCTAAATGAAAATATACGGTCTGGAAGAGGA GCAACATACCAGAGAACTTGTTGCCCTACAACTCAAGCATTCAGATAGGTCCTTAAAAATTGAG CTTATAGCTTCTTGTGATCTATCATTTTCACATCTTATAGCTTCAATCTGCTCAGGGCTATCTT TACCTCCATTGCATAGCAACTTCAATGTCGTTGGGCCTACCAGCAACAGGAAATCCAGATATCG GTAAAGAGAGAAAACAAAGTAACAGAAAGGTAAAGGTTTTATCTTCAAAATGGAAAATAAATAC TCTCCTTCCCAAATTGATCATCATATAGTGGAAACTAAAATTTCTCAAATTGATCATATAACCA CATGGACACAGATTTCATCGGAGTACAATCAATACAGCACGGGAGAATGTGTGCATGCTAAAGG GTGTAATTGTGCATTGTGTTTTAATCGATGCATGCATTGTGGGAGAATGTGTGCATATTGTGCA TGACATCTTGATTGATGCTGTTTAAATTATCCTTGGTCTTGGTGCACAAACGGATGATCAATTT GGGATGGAGGGAGTATGATTTATGACCCCAAAACATCCAGTATTCCAATAGGAATAGACTTGAA AAGAAATATATATGTTATTTCTTGGAGCACATTTTTTTAACAGGTATATAGACTGAACAAGATC TAATTAAATCCTGGCCAAGCAGCCAAGCTAGCAACAAGACTTTGCAAAAGGGCAGAATTAAGTT CGAGAAGTTGCAAGGGTCCAGACTCCAGATCACCATTTTGCATTTTGCATGCATTTAATGCACC AGTTATTGTCTGATGAAGCGTTTCTGTAGCTATATTCTCTAATACTTTAAATATTTGAGTTGGT GGTGGTTGATAGTCAATAACTAAACATGAATCGAATTCCACTGCAATAGATGGGCACATTTCAA GCTCACCAATAAAACAGAGCTATGGAGAAAAAAGAGCCAGTATAACAGGTATTCTACCAGAGGA AGTGAAGCATTCATTTAGCCTTTAAAAATTCTTGAAACGACACATTCATTTCTAAAACTAATAC TAAGTATATATAAGCCTGACAACTTACAATTCAATAGCAAGAAAAGTAGATCCACAGAATGCTT CTTAACAAGCAATCCATTTTCCTTCTGCAACAGTTGATGCAATTTTTCCATTACAGAAGTAAAT CCGAATCTGAAAGTAGCAGCACATTATCATTAGCGTAAAGCATTGCAACCGATTAAAGAAAGAA ATAATACTCATGTGATTGCTTACTTTTCCCGCTCCACTTTGGGATCACTTGTCCTTGCAATGAT AATCATTATAGATAATGCATCAACACGAATATTCTCCTCTGAATGCCTGTCCGCAATTTGTAGC ATTGCAGTGAAGAGTGAAGTCCAGACTGTAAAAGGAAGCTGTGTGTTTTCAGTGTGAAGCCCAT CATGGCTTCTTGATAGACTCGATGCATCAGGTGTATTCAGCGAAGTGGAGCTACCTTTGTGACT GTTCCGCTCCATGTGAACAGTATTGTTAACACATGGCTCAATAGAAACATTATTCCTGATGTTA CACTGAGGAAAATCGTATTAAAGTTCATAAGCATGAGAACCTATCATTATAAACAAGGAAAAAA TAATGAACAATCGTATTATTGTATATACCCACGTTCTTGTTGTATTGCTGCCTATGTCAAATAC TTGGTTGATTACAAGGCATCTACAAAATAAAAACCCACCCCACCCAATTCTCTCAGAAATAACA AATACAATGGAACAGAAAACAAAGACAATTCACCGTGCTAAATCAATATCAATATCTATTAATA TTTCTCAACATTTATCTGATACTACTTTATTTCTACTATGCAGTGATTGATTGCTCAGCCTGGA TGAAGATAGCAGCCCACAAAAATTGCTCGAAGCACAGCTGGTCAGTTAACAACTATACCTTCCA AGGCATGCACATTGTAAGAATCAAACTCTAGTTTTGCCAACAATTAGGCTAACTGATTTAGTGA CACTAAGGTGATACTGCCAGATTTGTATTTAAATGTACTTTCATTTTCTCATGATTTTAGAATT AAAAGATAGCATTTTCCAAGAGAGATTTATGGTCAAAGTTCAATTCAAGCAATACAAAACTGAA CTGACTGGTAGGTTACAGAAGAGAACATTGGTAAGGTATTGAATGCAATAGTAGCTGCTATTCT ATAAGATAAGGTTGGCTGGTCAATATCTGAGTTCAGTGACGAATCCAATTATGAAATACACTTC CATGGTAACTAGAACCATATTCAATGTAGTAGTAAAGCATACCTCTGATTAGACATCGTTCTGT TATTCAGCAAGTGCTGCAAGACACTATGTAACATCCGCAGGGCTCTACTAACAACAGCATCCTG AAAAAAAAACAGTAGGTAAAAATGATAATTAAGTCCAAGGAATAAGAGTAATTGCCTAATTGGA AAATTGACTGGTTCAATTCAGCATCCACAACACACACACACACACACTACAGAAAAACAACCAT GACAATAGATCACAAATAAAAGCCTACTTCAGCTTAGATAGTTACTGTATGTCCAACAAACTCA ACCTAAAGTTACTGTATGTCCAACAAACTCAACCTAAAGCCATGTAAGTTTGCATGTGAGAAGC TATTGTTACTAGTTCTTCAAATAAATCAGCAAGCTAACTGATTCTCAGCCGGCTAGATATTTCC ACAAGTATATGATGAAACTTGGTTTGAAACTGATCTGAGTAATTCTGACTTCCTTGCATAATAG GAAGCACTAAAATTGGGTTGTCCCGAATGCCGCATCTATTTTTTCTAGACCTAGTGGGGAAGCC CATAATCATAGACCTGAGAAATGTACTACAAATGGTAATGCAATGTAAATGACTATATAAGCAT GTAAATGAAGTTGGATAATCAGTTCATACATTACCAACAGCAGCCAAATTTAGCAATGCTTCGA GAAGAGTTTGTATAGGTATTGTATCACTGCTCGTCTGCAGGGACAAAACAGATAATTTGACAAT GTGAAACATTAATTCAAATAAAATAGAGTAACATGGAATGAAAAACTAAAAGTAAAGTAGAGAA CACTCTAACTACAGTATATGGAGATGAATGCATTGTCCCTATTCAATGTTGAAATCTAGTGCAG ACTACAGAGAAGATAGTCCGTTCAAGCTGAAGTTTTTGCCTTGATTAGTAAAAGTTCAAATTCC ACAAAATAGATGGTCAGTTCAAGCTGAAGCAGAGGAAAATTAAAAATAAATGTATATTTTCTAT CTTTGGCATGTCTATTACCTTTATGATGATATCATATACTTGGGAAATAGCATTTCTGACCGAT GAGCTCGCTTCAGAAGAGGCTTCACACTTGTCTAGCGATCCCGTAGACTGGACAAGTGTCAAAA TTTCTTCTGAGCAAGAAACCAGGATCTTTGATATCAGACTCCTCCCCATCAAACTGTTAGTTGG CATGCCCCACACTGCACACAGATTGCTAGAGATACGGTCAACCAATACTTTCTTGTGCTCAAGA TATTCGTTATTCCCTGGAAGATCTGTCTGAACCCCTACAGTCTTGATTTCCTTGTGTTTGCTGC CTTTTGATTCAAAGCGAACACTTTCCTAGCAATCACAGCAGAATAGATCACTAATGGAATATGC TAGCACCATATAATAGAAAGCAATGTGCCCAGGCAAGACAAGCTACCTCCAAGACCTCAGATGC ATATGTTTGATTCCTTTGGTTCAAACAGAGACCGTCTTGAGGGGAACTGAGCTCCTTGTTTCTA CCATTTAATGTCTCTGCTCTTCTCGTGGATGCCAAGCAAGAATCCCCAGTATGCAAAGCCCCAT TTGCAGGGGCATGAACAGACTGATCAATATCCATAGCCATACTGCCGGCATATTTGTTAGCAGA ACCC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							1557726-1553399(-)
1557672-1553407(+)
						
					

						Potential amino acid sequence
						
							MAMDIDQSVHAPANGALHTGDSCLASTRRAETLNGRNKELSSPQDGLCLNQRNQTYASEVLEES
VRFESKGSKHKEIKTVGVQTDLPGNNEYLEHKKVLVDRISSNLCAVWGMPTNSLMGRSLISKIL
VSCSEEILTLVQSTGSLDKCEASSEASSSVRNAISQVYDIIIKTSSDTIPIQTLLEALLNLAAV
GNDAVVSRALRMLHSVLQHLLNNRTMSNQRHSEENIRVDALSIMIIIARTSDPKVEREKFGFTS
VMEKLHQLLQKENGLLVKKHSVDLLFLLLNCPTTLKLLCNGGKDSPEQIEAIRCENDRSQEAIS
SIFKDLSECLSCRATSSLGIKLCRVVVTLLAYIASSGKLGYEVLLGPVTVRGANFLELIMEVLA
SQMEYDTALSNGEHELLKERGSANKYAGSMAMDIDQSVHAPANGALHTGDSCLASTRRAETLNG
RNKELSSPQDGLCLNQRNQTYASEVLEESVRFESKGSKHKEIKTVGVQTDLPGNNEYLEHKKVL
VDRISSNLCAVWGMPTNSLMGRSLISKILVSCSEEILTLVQSTGSLDKCEASSEASSSVRNAIS
QVYDIIIKTSSDTIPIQTLLEALLNLAAVGNDAVVSRALRMLHSVLQHLLNNRTMSNQRHSEEN
IRVDALSIMIIIARTSDPKVEREKFGFTSVMEKLHQLLQKENGLLVKKHSVDLLFLLLNCPTTL
KLLCNGGKDSPEQIEAIRCENDRSQEAISSIFKDLSECLSCRATSSLGIKLCRVVVTLLAYIAS
SGKLGYEVLLGPVTVRGANFLELIMEVLASQMEYDTALSNGEHELLKERGSANKYAGSMAMDID
QSVHAPANGALHTGDSCLASTRRAETLNGRNKELSSPQDGLCLNQRNQTYASEVLEESVRFESK
GSKHKEIKTVGVQTDLPGNNEYLEHKKVLVDRISSNLCAVWGMPTNSLMGRSLISKILVSCSEE
ILTLVQSTGSLDKCEASSEASSSVRNAISQVYDIIIKTSSDTIPIQTLLEALLNLAAVGNDAVV
SRALRMLHSVLQHLLNNRTMSNQRHSEENIRVDALSIMIIIARTSDPKVEREKFGFTSVMEKLH
QLLQKENGLLVKKHSVDLLFLLLNCPTTLKLLCNGGKDSPEQIEAIRCENDRSQEAISSIFKDL
SECLSCRATSSLGIKLCRVVVTLLAYIASSGKLGYEVLLGPVTVRGANFLELIMEVLASQMEYD
TALSNGEHELLKERGSANKYAGSMAMDIDQSVHAPANGALHTGDSCLASTRRAETLNGRNKELS
SPQDGLCLNQRNQTYASEVLEESVRFESKGSKHKEIKTVGVQTDLPGNNEYLEHKKVLVDRISS
NLCAVWGMPTNSLMGRSLISKILVSCSEEILTLVQSTGSLDKCEASSEASSSVRNAISQVYDII
IKTSSDTIPIQTLLEALLNLAAVGNDAVVSRALRMLHSVLQHLLNNRTMSNQRHSEENIRVDAL
SIMIIIARTSDPKVEREKFGFTSVMEKLHQLLQKENGLLVKKHSVDLLFLLLNCPTTLKLLCNG
GKDSPEQIEAIRCENDRSQEAISSIFKDLSECLSCRATSSLGIKLCRVVVTLLAYIASSGKLGY
EVLLGPVTVRGANFLELIMEVLASQMEYDTALSNGEHELLKE(-)
MQSPICRGMNRLINIHSHTAGIFVSRTPFFQ*(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	1557726-1553399(-) 1557672-1553407(+)
Potential amino acid sequence	MAMDIDQSVHAPANGALHTGDSCLASTRRAETLNGRNKELSSPQDGLCLNQRNQTYASEVLEES VRFESKGSKHKEIKTVGVQTDLPGNNEYLEHKKVLVDRISSNLCAVWGMPTNSLMGRSLISKIL VSCSEEILTLVQSTGSLDKCEASSEASSSVRNAISQVYDIIIKTSSDTIPIQTLLEALLNLAAV GNDAVVSRALRMLHSVLQHLLNNRTMSNQRHSEENIRVDALSIMIIIARTSDPKVEREKFGFTS VMEKLHQLLQKENGLLVKKHSVDLLFLLLNCPTTLKLLCNGGKDSPEQIEAIRCENDRSQEAIS SIFKDLSECLSCRATSSLGIKLCRVVVTLLAYIASSGKLGYEVLLGPVTVRGANFLELIMEVLA SQMEYDTALSNGEHELLKERGSANKYAGSMAMDIDQSVHAPANGALHTGDSCLASTRRAETLNG RNKELSSPQDGLCLNQRNQTYASEVLEESVRFESKGSKHKEIKTVGVQTDLPGNNEYLEHKKVL VDRISSNLCAVWGMPTNSLMGRSLISKILVSCSEEILTLVQSTGSLDKCEASSEASSSVRNAIS QVYDIIIKTSSDTIPIQTLLEALLNLAAVGNDAVVSRALRMLHSVLQHLLNNRTMSNQRHSEEN IRVDALSIMIIIARTSDPKVEREKFGFTSVMEKLHQLLQKENGLLVKKHSVDLLFLLLNCPTTL KLLCNGGKDSPEQIEAIRCENDRSQEAISSIFKDLSECLSCRATSSLGIKLCRVVVTLLAYIAS SGKLGYEVLLGPVTVRGANFLELIMEVLASQMEYDTALSNGEHELLKERGSANKYAGSMAMDID QSVHAPANGALHTGDSCLASTRRAETLNGRNKELSSPQDGLCLNQRNQTYASEVLEESVRFESK GSKHKEIKTVGVQTDLPGNNEYLEHKKVLVDRISSNLCAVWGMPTNSLMGRSLISKILVSCSEE ILTLVQSTGSLDKCEASSEASSSVRNAISQVYDIIIKTSSDTIPIQTLLEALLNLAAVGNDAVV SRALRMLHSVLQHLLNNRTMSNQRHSEENIRVDALSIMIIIARTSDPKVEREKFGFTSVMEKLH QLLQKENGLLVKKHSVDLLFLLLNCPTTLKLLCNGGKDSPEQIEAIRCENDRSQEAISSIFKDL SECLSCRATSSLGIKLCRVVVTLLAYIASSGKLGYEVLLGPVTVRGANFLELIMEVLASQMEYD TALSNGEHELLKERGSANKYAGSMAMDIDQSVHAPANGALHTGDSCLASTRRAETLNGRNKELS SPQDGLCLNQRNQTYASEVLEESVRFESKGSKHKEIKTVGVQTDLPGNNEYLEHKKVLVDRISS NLCAVWGMPTNSLMGRSLISKILVSCSEEILTLVQSTGSLDKCEASSEASSSVRNAISQVYDII IKTSSDTIPIQTLLEALLNLAAVGNDAVVSRALRMLHSVLQHLLNNRTMSNQRHSEENIRVDAL SIMIIIARTSDPKVEREKFGFTSVMEKLHQLLQKENGLLVKKHSVDLLFLLLNCPTTLKLLCNG GKDSPEQIEAIRCENDRSQEAISSIFKDLSECLSCRATSSLGIKLCRVVVTLLAYIASSGKLGY EVLLGPVTVRGANFLELIMEVLASQMEYDTALSNGEHELLKE(-) MQSPICRGMNRLINIHSHTAGIFVSRTPFFQ*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA007202_circ_g.3

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