CircRNA Name |
AT1G24300_circ_g.4 |
ID in PlantcircBase |
ath_circ_004164 |
Alias |
At_ciR2676 |
Organism |
Arabidpsis thaliana |
Position |
chr1: 8617617-8618752 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
e-circRNA
|
Identification method |
CIRCexplorer, KNIFE, PcircRNA_finder, find_circ |
Parent gene |
AT1G24300 |
Parent gene annotation |
GYF domain-containing protein |
Parent gene strand |
- |
Alternative splicing |
AT1G24300_circ_g.2 AT1G24300_circ_g.3 |
Support reads |
3/1 |
Tissues |
leaf/whole_plant |
Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
CT-AC
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT1G24300.3:3 AT1G24300.2:3 AT1G24300.1:3
|