Plant Circular RNA Database

Detail information of Zm00001d029004_circ_g.8

			
				
						 General Information
					

				
						CircRNA Name
						Zm00001d029004_circ_g.8
					

						ID in PlantcircBase
						zma_circ_006516
					

						Alias
						Zm01circ00062
					

						Organism
						
							Zea mays						
					

						Position
						
							chr1: 54471276-54474913  JBrowse»						
					

						Reference genome
						
							AGPv4.38						
					

						Type  
						
							u-circRNA							
									
								

					

						Identification method
						CIRI2
					

						Parent gene
						
							Zm00001d029004						
					

						Parent gene annotation
						
							Guanine nucleotide exchange factor SPIKE 1
							
					

						Parent gene strand
						+
					

						Alternative splicing
						
							Zm00001d029004_circ_g.2 Zm00001d029004_circ_g.3 Zm00001d029004_circ_g.4 Zm00001d029004_circ_g.5 Zm00001d029004_circ_g.6 Zm00001d029004_circ_g.7 						
					

						Support reads
						NA
					

						Tissues
						leaf, endosperm
					

						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

					

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

					

						Number of exons covered
						Zm00001d029004_T065:6
Zm00001d029004_T101:6
Zm00001d029004_T002:6
Zm00001d029004_T046:6
Zm00001d029004_T041:6
Zm00001d029004_T079:6
Zm00001d029004_T108:6
Zm00001d029004_T044:6
Zm00001d029004_T019:6
Zm00001d029004_T049:6
Zm00001d029004_T113:6
Zm00001d029004_T082:6
Zm00001d029004_T047:6
Zm00001d029004_T056:6
Zm00001d029004_T055:6
Zm00001d029004_T013:6
Zm00001d029004_T039:6
Zm00001d029004_T029:6
Zm00001d029004_T067:6
Zm00001d029004_T021:5
Zm00001d029004_T099:6
Zm00001d029004_T071:6
Zm00001d029004_T025:6
Zm00001d029004_T042:6
Zm00001d029004_T086:6
Zm00001d029004_T087:6
Zm00001d029004_T005:6
Zm00001d029004_T077:6
Zm00001d029004_T118:6
Zm00001d029004_T070:5
Zm00001d029004_T095:6
Zm00001d029004_T060:6
Zm00001d029004_T010:5
Zm00001d029004_T105:6
Zm00001d029004_T092:6
Zm00001d029004_T104:6
Zm00001d029004_T112:6
Zm00001d029004_T122:4
Zm00001d029004_T059:6
Zm00001d029004_T034:6
Zm00001d029004_T061:6
Zm00001d029004_T097:6
Zm00001d029004_T014:6
Zm00001d029004_T011:6
Zm00001d029004_T017:5
Zm00001d029004_T036:6
Zm00001d029004_T096:6
Zm00001d029004_T107:6
Zm00001d029004_T062:6
Zm00001d029004_T051:6
Zm00001d029004_T023:6
Zm00001d029004_T058:6
Zm00001d029004_T016:6
Zm00001d029004_T003:6
Zm00001d029004_T053:6
Zm00001d029004_T028:6
Zm00001d029004_T027:6
Zm00001d029004_T114:6
Zm00001d029004_T033:6
Zm00001d029004_T083:6
Zm00001d029004_T004:6
Zm00001d029004_T074:6
Zm00001d029004_T018:5
Zm00001d029004_T075:6
Zm00001d029004_T008:6
Zm00001d029004_T088:6
Zm00001d029004_T120:6

					

			
		

General Information
CircRNA Name	Zm00001d029004_circ_g.8
ID in PlantcircBase	zma_circ_006516
Alias	Zm01circ00062
Organism	Zea mays
Position	chr1: 54471276-54474913 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d029004
Parent gene annotation	Guanine nucleotide exchange factor SPIKE 1
Parent gene strand	+
Alternative splicing	Zm00001d029004_circ_g.2 Zm00001d029004_circ_g.3 Zm00001d029004_circ_g.4 Zm00001d029004_circ_g.5 Zm00001d029004_circ_g.6 Zm00001d029004_circ_g.7
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d029004_T065:6 Zm00001d029004_T101:6 Zm00001d029004_T002:6 Zm00001d029004_T046:6 Zm00001d029004_T041:6 Zm00001d029004_T079:6 Zm00001d029004_T108:6 Zm00001d029004_T044:6 Zm00001d029004_T019:6 Zm00001d029004_T049:6 Zm00001d029004_T113:6 Zm00001d029004_T082:6 Zm00001d029004_T047:6 Zm00001d029004_T056:6 Zm00001d029004_T055:6 Zm00001d029004_T013:6 Zm00001d029004_T039:6 Zm00001d029004_T029:6 Zm00001d029004_T067:6 Zm00001d029004_T021:5 Zm00001d029004_T099:6 Zm00001d029004_T071:6 Zm00001d029004_T025:6 Zm00001d029004_T042:6 Zm00001d029004_T086:6 Zm00001d029004_T087:6 Zm00001d029004_T005:6 Zm00001d029004_T077:6 Zm00001d029004_T118:6 Zm00001d029004_T070:5 Zm00001d029004_T095:6 Zm00001d029004_T060:6 Zm00001d029004_T010:5 Zm00001d029004_T105:6 Zm00001d029004_T092:6 Zm00001d029004_T104:6 Zm00001d029004_T112:6 Zm00001d029004_T122:4 Zm00001d029004_T059:6 Zm00001d029004_T034:6 Zm00001d029004_T061:6 Zm00001d029004_T097:6 Zm00001d029004_T014:6 Zm00001d029004_T011:6 Zm00001d029004_T017:5 Zm00001d029004_T036:6 Zm00001d029004_T096:6 Zm00001d029004_T107:6 Zm00001d029004_T062:6 Zm00001d029004_T051:6 Zm00001d029004_T023:6 Zm00001d029004_T058:6 Zm00001d029004_T016:6 Zm00001d029004_T003:6 Zm00001d029004_T053:6 Zm00001d029004_T028:6 Zm00001d029004_T027:6 Zm00001d029004_T114:6 Zm00001d029004_T033:6 Zm00001d029004_T083:6 Zm00001d029004_T004:6 Zm00001d029004_T074:6 Zm00001d029004_T018:5 Zm00001d029004_T075:6 Zm00001d029004_T008:6 Zm00001d029004_T088:6 Zm00001d029004_T120:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GAGCCCAGATGTCGAGCATCCTGCATCCCCAAAGTACTCTGAACGATTGTCCCCATCGGTCAAC
ACATATTTGTCGGAGGCTTCGAGGCATGAAATAAGGgtgaagatgtcccaccactgcaattgaa
agaaggtgtcttcaggtgcatcatgcagctctttgattgccttctaactgaggttcatgagcgt
tgtaaaaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 839
Transcript exons: 54471276-54471469,54472018-54472148,54473155-54473230,54
473397-54473507,54473930-54474112,54474770-54474913
GTGAAGATGTCCCACCACTGCAATTGAAAGAAGGTGTCTTCAGGTGCATCATGCAGCTCTTTGA
TTGCCTTCTAACTGAGGTTCATGAGCGTTGTAAAAAGGGTTTAAGCTTGGCAAAACGCTTGAAC
AGCACACTTGCTTTCTTTTGCTATGATCTTTTATCAATTATTGAGCCTCGCCAAGTTTTTGAGC
TGGTTTCGTTGTACATGGACAAGTTTGCAGGAGTTTGTCAATCAGTCCTTCATGACTGCAAATT
GACATTCCTGCAGATAATATGCGACCATGATCTATTCGTTGAGATGCCTGGGCGGGATCCTTCT
GATAGAAACTATCTCTCGTCAGTTCTCATCCAAGAGATCTTTCTGACCTTAGACCATGATGATT
TATCTCAACGAGCGAAGGCTGCTCGGATTTTGGTTGTCCTTATATGCAAACATGAATTTGATGC
ACGCTATCAAAAAAGCGAAGACAAATTGTACATTGCTCAGCTGTATTTTCCTCTTATAGGGCAG
ATCCTTGATGAGATGCCTGTTTTCTATAATCTGAATGCCATTGAAAAGCGTGAAGTGCTAGTTG
TCATTTTGCAAATTGTGAGGAACTTGGATGATGCAACTCTTATCAAAGCATGGCAACAAAGCAT
TGCTAGAACCAGATTGTTCTTCAAGCTTCTTGAAGAATGTATAATCCATTTCGAGCACAACAAA
ACAGGAGACAACATGCTACTTGGTGCTAGTTCTCGGAGCCCAGATGTCGAGCATCCTGCATCCC
CAAAGTACTCTGAACGATTGTCCCCATCGGTCAACACATATTTGTCGGAGGCTTCGAGGCATGA
AATAAGG
						
					

						Genomic sequence
						
							GTGAAGATGTCCCACCACTGCAATTGAAAGAAGGTGTCTTCAGGTGCATCATGCAGCTCTTTGA
TTGCCTTCTAACTGAGGTTCATGAGCGTTGTAAAAAGGGTTTAAGCTTGGCAAAACGCTTGAAC
AGCACACTTGCTTTCTTTTGCTATGATCTTTTATCAATTATTGAGCCTCGCCAAGTTTTTGAGC
TGGTAAGTTAGGAAATCATTTAAAGTTTATGCTCTCTACCTGTTTTTTTTTATTATTTACCAAG
CTTATTAAAACAATAAAACGTTGGAACGCTCATGGGTGAAATTTTGACTTTTAAACGTTTAAAC
TTTGTTTAAACGTAGTTTTAAACAACATAGGAAAAATACCAATATATCATAATTTCAGATAATA
ATATGAAGTTAAATACCAAAACAGAGAGGTTAGTGGCTTACCAAAACTTCACCCATGAGCTAGC
TGGATTGAACCCCAAAAGTAACTAATATACTGGGCCCAAAAATAGCTAATGGTCTAAAATGCAT
AAAACACTGCGTTTTACAGTTTAGAACGCCAAAGCGCTAAAACGTGATTTCAACCTCTAATTAG
AGTTTTGACGTTTAAACGTAGTTTTAATAACACTGTTATTTGCATTTATGTTTTTGATTTCTCA
GCGTGTCCCTGAATTGCAAACGCACTAATGCTTTGCCACAAGAAAGTTTCTGTGCACAGTTATG
TTTTATATGGTGCTAAAACATATGTATCTATTTTTCAGGTTTCGTTGTACATGGACAAGTTTGC
AGGAGTTTGTCAATCAGTCCTTCATGACTGCAAATTGACATTCCTGCAGATAATATGCGACCAT
GATCTATTCGTTGAGATGCCTGGGCGGGATCCTTCTGATAGGTAGCTTGTTGAAATGTTGCATT
TGCAAGCAGTTGTTGAGTGTTGACAATGCTTATATGTTTTCTATATTTTCTTGTGGATGTAATT
TTTTGAACTGTCTTGCTAGTGAAGTTGTCCTGTTGATTTCTAAGCTTACAAGTTTGACAGTACA
TCATATTTCTTTTCATAGACTGATTATTGTTCGAGCAGTAATTCTATTAAGATTCTAAACTTGC
TAGTTGATTTGAAGGATTGCACTTGAATCACGCAACTTGTGTCTCTTGTTTTCAGATTTTAAAT
TAATCACACATAGATATGTTGACTTTGTCCAGGTCCAAGATGCTGTCCTAAAAGACATGCATCC
AAACCAAACTTTTAAAGCTTACCACAATCATACATTGAGGTTTTTAGATCCTTCACATGAGAAT
GATACTACTTGATTCATTAGAAGTATCAATGCATCATTGTATCTTTATCATATACCAGTACAAT
GCCCGTACGTTACGACGACACACAAGAACAAATATTACACTTTATCTTAGCCAAATGACATATA
ATGGTATGAGTTGAAAATGAGCCCGACCTTTTTTTTATAGCTCAGTCGCTCGCTTGTCCTCCTT
AAGTTAGCGTGGTGATACTATATGGGTGCGTTGTGTGCGACTTCCTGTCGTGTTATTCTTGGGT
GGTTTCTCACGGACCATATGGGCTTGGGTGGTTTTCATTGCCCATCTATGGGGTAATGGCCAAC
AGGTGTGTGTGGGGGGGGGGGGGGGTGGGGGGGAGGCGCTTCGCGTGTGACGCAGTATGACCAT
CAAAACCGGTGGTTTATAGTAGAGATAGAGACTAGAGAAGTAATGGTAAATGGTTGCATAATCG
ATCATGTTCATATACTAACAACAAATAAAGGTGGAGTATCTTGAGATTCCAATAAAGCACAATG
AAGCTCATGGATGACAAACATTCTACATTTTTTCTCATGTTCATTTTTTGGGGACAATGTTTTG
AACAAAGCAATTTTGTTTTACAGAAACTATCTCTCGTCAGTTCTCATCCAAGAGATCTTTCTGA
CCTTAGACCATGATGATTTATCTCAACGAGCGAAGGTAAGAAACTCAGTTCTGAGAAAACAAAA
TTTGTTTTTATTACGACTCTTTAGCAACCCTCCATATGAACTCAGAACTATTTGGGCATAGTGG
CATACATAAATTTGCAATAGGCTATAATACTTACTTTGTTATGTATAAACATACTGTTTTCCAC
CCCTCACAGGCTGCTCGGATTTTGGTTGTCCTTATATGCAAACATGAATTTGATGCACGCTATC
AAAAAAGCGAAGACAAATTGTACATTGCTCAGCTGTATTTTCCTCTTATAGGGCAGGTATGTGC
CTTATACACTTCATATCTAGCTATCATGTAATGATATCAGTAATTAGCATGTCATTCTCTTTGT
TTGAAAAAAATGTTGTTCCCTCACATGATTTAGTATATGCTTCCTCCGATCACAAATATAAGTC
CATCTAGGTTTGCTTGAGTCAAACTTCTTCAACTTTGATCATCGATATATAAATTTTATATATA
TTGGTAACATAAGGTTGATATTGTTGGATTTATTCTGAGAAGTACTTTCATATGCAATTTTTTT
TGTAAATCCATACAAATTTTAAGATATTAATTGTTAGTCTTAATTCATAAATGAATTTGACTTA
GGACAAACTTAGATGGACTTATATTTGTGTCGGAGGAAGTGAATTTTTTTCATTACATATTTCT
TTGCTTATGAGAAATCATTCTTTGTTTTAGATCCTTGATGAGATGCCTGTTTTCTATAATCTGA
ATGCCATTGAAAAGCGTGAAGTGCTAGTTGTCATTTTGCAAATTGTGAGGAACTTGGATGATGC
AACTCTTATCAAAGCATGGCAACAAAGCATTGCTAGAACCAGATTGTTCTTCAAGCTTCTTGAA
GAATGTATAATCCATTTCGAGGTTAGTAGTATGATCTTTGAGTTTTTAGAATTCCAAAAATACT
TTCCAGTATAAGACTAGTACTTCTGCCTGTCGCAGTTATTATTTAGTATTCTGTTAATGTGGGC
TTTGATTTTGTGTTAAGCTACAAAGCTCTTGATGTTATTCATATAAATTCCTTTGCAGATGTTT
GATTGGAGTATATCTGAATGCGAATTCAATATTTGATTCCATACCTATTATATTTTTCATGCAT
GGACATCCTATGAACCTGAAATGCAATACGCTATACATGCATATTTAAGTTTTTTTTTCGAACA
CGCAGGAGAGCTGTGTATCATTATGTTAAGAAGGAAAAAAAAGGTGAGGTTTAAAGAAAACCTC
GAACGACTTCATACAAAAACTCACACCCTAAACTAGAAACTTTACAAAAGAAAATAACTGGACC
CTTGACTACTAGACCCCAAAAACAGAGCTCACTGATTGGAAGGCTAGTTCAAACTACACTTACT
CATCCACACCTGTTTAATTCCGTACTATGACAAAATAATTATTGTTAAATAGGATCTGTGTATT
TTGTTTACTTGTCATGTACTCATGCATTTGCTTTGTTCCATTGAGCCGTGTTAATTCTTAATAA
TTTATTTAAAGTTAAATATCTTGAATTTTTCTCTGCAGCACAACAAAACAGGAGACAACATGCT
ACTTGGTGCTAGTTCTCGGAGCCCAGATGTCGAGCATCCTGCATCCCCAAAGTACTCTGAACGA
TTGTCCCCATCGGTCAACACATATTTGTCGGAGGCTTCGAGGCATGAAATAAGG
						
					

			
		

Sequences
Splice junction sequence	GAGCCCAGATGTCGAGCATCCTGCATCCCCAAAGTACTCTGAACGATTGTCCCCATCGGTCAAC ACATATTTGTCGGAGGCTTCGAGGCATGAAATAAGGgtgaagatgtcccaccactgcaattgaa agaaggtgtcttcaggtgcatcatgcagctctttgattgccttctaactgaggttcatgagcgt tgtaaaaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 839 Transcript exons: 54471276-54471469,54472018-54472148,54473155-54473230,54 473397-54473507,54473930-54474112,54474770-54474913 GTGAAGATGTCCCACCACTGCAATTGAAAGAAGGTGTCTTCAGGTGCATCATGCAGCTCTTTGA TTGCCTTCTAACTGAGGTTCATGAGCGTTGTAAAAAGGGTTTAAGCTTGGCAAAACGCTTGAAC AGCACACTTGCTTTCTTTTGCTATGATCTTTTATCAATTATTGAGCCTCGCCAAGTTTTTGAGC TGGTTTCGTTGTACATGGACAAGTTTGCAGGAGTTTGTCAATCAGTCCTTCATGACTGCAAATT GACATTCCTGCAGATAATATGCGACCATGATCTATTCGTTGAGATGCCTGGGCGGGATCCTTCT GATAGAAACTATCTCTCGTCAGTTCTCATCCAAGAGATCTTTCTGACCTTAGACCATGATGATT TATCTCAACGAGCGAAGGCTGCTCGGATTTTGGTTGTCCTTATATGCAAACATGAATTTGATGC ACGCTATCAAAAAAGCGAAGACAAATTGTACATTGCTCAGCTGTATTTTCCTCTTATAGGGCAG ATCCTTGATGAGATGCCTGTTTTCTATAATCTGAATGCCATTGAAAAGCGTGAAGTGCTAGTTG TCATTTTGCAAATTGTGAGGAACTTGGATGATGCAACTCTTATCAAAGCATGGCAACAAAGCAT TGCTAGAACCAGATTGTTCTTCAAGCTTCTTGAAGAATGTATAATCCATTTCGAGCACAACAAA ACAGGAGACAACATGCTACTTGGTGCTAGTTCTCGGAGCCCAGATGTCGAGCATCCTGCATCCC CAAAGTACTCTGAACGATTGTCCCCATCGGTCAACACATATTTGTCGGAGGCTTCGAGGCATGA AATAAGG
Genomic sequence	GTGAAGATGTCCCACCACTGCAATTGAAAGAAGGTGTCTTCAGGTGCATCATGCAGCTCTTTGA TTGCCTTCTAACTGAGGTTCATGAGCGTTGTAAAAAGGGTTTAAGCTTGGCAAAACGCTTGAAC AGCACACTTGCTTTCTTTTGCTATGATCTTTTATCAATTATTGAGCCTCGCCAAGTTTTTGAGC TGGTAAGTTAGGAAATCATTTAAAGTTTATGCTCTCTACCTGTTTTTTTTTATTATTTACCAAG CTTATTAAAACAATAAAACGTTGGAACGCTCATGGGTGAAATTTTGACTTTTAAACGTTTAAAC TTTGTTTAAACGTAGTTTTAAACAACATAGGAAAAATACCAATATATCATAATTTCAGATAATA ATATGAAGTTAAATACCAAAACAGAGAGGTTAGTGGCTTACCAAAACTTCACCCATGAGCTAGC TGGATTGAACCCCAAAAGTAACTAATATACTGGGCCCAAAAATAGCTAATGGTCTAAAATGCAT AAAACACTGCGTTTTACAGTTTAGAACGCCAAAGCGCTAAAACGTGATTTCAACCTCTAATTAG AGTTTTGACGTTTAAACGTAGTTTTAATAACACTGTTATTTGCATTTATGTTTTTGATTTCTCA GCGTGTCCCTGAATTGCAAACGCACTAATGCTTTGCCACAAGAAAGTTTCTGTGCACAGTTATG TTTTATATGGTGCTAAAACATATGTATCTATTTTTCAGGTTTCGTTGTACATGGACAAGTTTGC AGGAGTTTGTCAATCAGTCCTTCATGACTGCAAATTGACATTCCTGCAGATAATATGCGACCAT GATCTATTCGTTGAGATGCCTGGGCGGGATCCTTCTGATAGGTAGCTTGTTGAAATGTTGCATT TGCAAGCAGTTGTTGAGTGTTGACAATGCTTATATGTTTTCTATATTTTCTTGTGGATGTAATT TTTTGAACTGTCTTGCTAGTGAAGTTGTCCTGTTGATTTCTAAGCTTACAAGTTTGACAGTACA TCATATTTCTTTTCATAGACTGATTATTGTTCGAGCAGTAATTCTATTAAGATTCTAAACTTGC TAGTTGATTTGAAGGATTGCACTTGAATCACGCAACTTGTGTCTCTTGTTTTCAGATTTTAAAT TAATCACACATAGATATGTTGACTTTGTCCAGGTCCAAGATGCTGTCCTAAAAGACATGCATCC AAACCAAACTTTTAAAGCTTACCACAATCATACATTGAGGTTTTTAGATCCTTCACATGAGAAT GATACTACTTGATTCATTAGAAGTATCAATGCATCATTGTATCTTTATCATATACCAGTACAAT GCCCGTACGTTACGACGACACACAAGAACAAATATTACACTTTATCTTAGCCAAATGACATATA ATGGTATGAGTTGAAAATGAGCCCGACCTTTTTTTTATAGCTCAGTCGCTCGCTTGTCCTCCTT AAGTTAGCGTGGTGATACTATATGGGTGCGTTGTGTGCGACTTCCTGTCGTGTTATTCTTGGGT GGTTTCTCACGGACCATATGGGCTTGGGTGGTTTTCATTGCCCATCTATGGGGTAATGGCCAAC AGGTGTGTGTGGGGGGGGGGGGGGGTGGGGGGGAGGCGCTTCGCGTGTGACGCAGTATGACCAT CAAAACCGGTGGTTTATAGTAGAGATAGAGACTAGAGAAGTAATGGTAAATGGTTGCATAATCG ATCATGTTCATATACTAACAACAAATAAAGGTGGAGTATCTTGAGATTCCAATAAAGCACAATG AAGCTCATGGATGACAAACATTCTACATTTTTTCTCATGTTCATTTTTTGGGGACAATGTTTTG AACAAAGCAATTTTGTTTTACAGAAACTATCTCTCGTCAGTTCTCATCCAAGAGATCTTTCTGA CCTTAGACCATGATGATTTATCTCAACGAGCGAAGGTAAGAAACTCAGTTCTGAGAAAACAAAA TTTGTTTTTATTACGACTCTTTAGCAACCCTCCATATGAACTCAGAACTATTTGGGCATAGTGG CATACATAAATTTGCAATAGGCTATAATACTTACTTTGTTATGTATAAACATACTGTTTTCCAC CCCTCACAGGCTGCTCGGATTTTGGTTGTCCTTATATGCAAACATGAATTTGATGCACGCTATC AAAAAAGCGAAGACAAATTGTACATTGCTCAGCTGTATTTTCCTCTTATAGGGCAGGTATGTGC CTTATACACTTCATATCTAGCTATCATGTAATGATATCAGTAATTAGCATGTCATTCTCTTTGT TTGAAAAAAATGTTGTTCCCTCACATGATTTAGTATATGCTTCCTCCGATCACAAATATAAGTC CATCTAGGTTTGCTTGAGTCAAACTTCTTCAACTTTGATCATCGATATATAAATTTTATATATA TTGGTAACATAAGGTTGATATTGTTGGATTTATTCTGAGAAGTACTTTCATATGCAATTTTTTT TGTAAATCCATACAAATTTTAAGATATTAATTGTTAGTCTTAATTCATAAATGAATTTGACTTA GGACAAACTTAGATGGACTTATATTTGTGTCGGAGGAAGTGAATTTTTTTCATTACATATTTCT TTGCTTATGAGAAATCATTCTTTGTTTTAGATCCTTGATGAGATGCCTGTTTTCTATAATCTGA ATGCCATTGAAAAGCGTGAAGTGCTAGTTGTCATTTTGCAAATTGTGAGGAACTTGGATGATGC AACTCTTATCAAAGCATGGCAACAAAGCATTGCTAGAACCAGATTGTTCTTCAAGCTTCTTGAA GAATGTATAATCCATTTCGAGGTTAGTAGTATGATCTTTGAGTTTTTAGAATTCCAAAAATACT TTCCAGTATAAGACTAGTACTTCTGCCTGTCGCAGTTATTATTTAGTATTCTGTTAATGTGGGC TTTGATTTTGTGTTAAGCTACAAAGCTCTTGATGTTATTCATATAAATTCCTTTGCAGATGTTT GATTGGAGTATATCTGAATGCGAATTCAATATTTGATTCCATACCTATTATATTTTTCATGCAT GGACATCCTATGAACCTGAAATGCAATACGCTATACATGCATATTTAAGTTTTTTTTTCGAACA CGCAGGAGAGCTGTGTATCATTATGTTAAGAAGGAAAAAAAAGGTGAGGTTTAAAGAAAACCTC GAACGACTTCATACAAAAACTCACACCCTAAACTAGAAACTTTACAAAAGAAAATAACTGGACC CTTGACTACTAGACCCCAAAAACAGAGCTCACTGATTGGAAGGCTAGTTCAAACTACACTTACT CATCCACACCTGTTTAATTCCGTACTATGACAAAATAATTATTGTTAAATAGGATCTGTGTATT TTGTTTACTTGTCATGTACTCATGCATTTGCTTTGTTCCATTGAGCCGTGTTAATTCTTAATAA TTTATTTAAAGTTAAATATCTTGAATTTTTCTCTGCAGCACAACAAAACAGGAGACAACATGCT ACTTGGTGCTAGTTCTCGGAGCCCAGATGTCGAGCATCCTGCATCCCCAAAGTACTCTGAACGA TTGTCCCCATCGGTCAACACATATTTGTCGGAGGCTTCGAGGCATGAAATAAGG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.08142494

Conservation Information
Conserved circRNAs	NA
PMCS	0.08142494

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							54471327-54471299(+)
54471329-54474875(-)
						
						Potential amino acid sequence
						
							MQLFDCLLTEVHERCKKGLSLAKRLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSVL
HDCKLTFLQIICDHDLFVEMPGRDPSDRNYLSSVLIQEIFLTLDHDDLSQRAKAARILVVLICK
HEFDARYQKSEDKLYIAQLYFPLIGQILDEMPVFYNLNAIEKREVLVVILQIVRNLDDATLIKA
WQQSIARTRLFFKLLEECIIHFEHNKTGDNMLLGASSRSPDVEHPASPKYSERLSPSVNTYLSE
ASRHEIRVKMSHHCN*(+)
MMHLKTPSFNCSGGTSSPLFHASKPPTNMC*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	54471327-54471299(+) 54471329-54474875(-)
Potential amino acid sequence	MQLFDCLLTEVHERCKKGLSLAKRLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSVL HDCKLTFLQIICDHDLFVEMPGRDPSDRNYLSSVLIQEIFLTLDHDDLSQRAKAARILVVLICK HEFDARYQKSEDKLYIAQLYFPLIGQILDEMPVFYNLNAIEKREVLVVILQIVRNLDDATLIKA WQQSIARTRLFFKLLEECIIHFEHNKTGDNMLLGASSRSPDVEHPASPKYSERLSPSVNTYLSE ASRHEIRVKMSHHCN(+) MMHLKTPSFNCSGGTSSPLFHASKPPTNMC(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d029004_circ_g.8

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