CircRNA Name |
AT1G23440_circ_g.5 |
ID in PlantcircBase |
ath_circ_004061 |
Alias |
Ath_circ_FC0494, AT1G23440_C1 |
Organism |
Arabidpsis thaliana |
Position |
chr1: 8323451-8324050 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
ue-circRNA
|
Identification method |
CIRI, circRNA_finder, find_circ, CIRI-full, CIRI2 |
Parent gene |
AT1G23440 |
Parent gene annotation |
Peptidase C15, pyroglutamyl peptidase I-like protein |
Parent gene strand |
+ |
Alternative splicing |
AT1G23440_circ_g.2 AT1G23440_circ_g.3 AT1G23440_circ_g.4 |
Support reads |
4 |
Tissues |
root, whole_plant, leaf |
Exon boundary |
Yes-No
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT1G23440.3:3 AT1G23440.1:3
|