Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d003713_circ_g.2 |
ID in PlantcircBase | zma_circ_001052 |
Alias | circ440 |
Organism | Zea mays |
Position | chr2: 56085088-56089994 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d003713 |
Parent gene annotation |
Exocyst complex component SEC5A |
Parent gene strand | + |
Alternative splicing | Zm00001d003713_circ_g.1 Zm00001d003713_circ_g.3 Zm00001d003713_circ_g.4 |
Support reads | 5 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d003713_T007:11 Zm00001d003713_T012:4 Zm00001d003713_T008:8 Zm00001d003713_T006:13 Zm00001d003713_T004:13 Zm00001d003713_T003:14 Zm00001d003713_T005:13 Zm00001d003713_T009:9 Zm00001d003713_T001:14 Zm00001d003713_T013:3 Zm00001d003713_T011:5 Zm00001d003713_T010:8 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.006198606 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |