Plant Circular RNA Database

Detail information of Zm00001d003713_circ_g.3

			
						 General Information
					
						CircRNA Name
						Zm00001d003713_circ_g.3
					
						ID in PlantcircBase
						zma_circ_007182
					
						Alias
						Zm02circ00051, zma_circ_0000744, GRMZM2G044681_C1
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 56085089-56089994  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d003713						
					
						Parent gene annotation
						
							Exocyst complex component SEC5A
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d003713_circ_g.1 Zm00001d003713_circ_g.2 Zm00001d003713_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d003713_T009:9
Zm00001d003713_T007:11
Zm00001d003713_T005:13
Zm00001d003713_T011:5
Zm00001d003713_T003:14
Zm00001d003713_T008:8
Zm00001d003713_T012:4
Zm00001d003713_T010:8
Zm00001d003713_T013:3
Zm00001d003713_T001:14
Zm00001d003713_T006:13
Zm00001d003713_T004:13

General Information
CircRNA Name	Zm00001d003713_circ_g.3
ID in PlantcircBase	zma_circ_007182
Alias	Zm02circ00051, zma_circ_0000744, GRMZM2G044681_C1
Organism	Zea mays
Position	chr2: 56085089-56089994 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d003713
Parent gene annotation	Exocyst complex component SEC5A
Parent gene strand	+
Alternative splicing	Zm00001d003713_circ_g.1 Zm00001d003713_circ_g.2 Zm00001d003713_circ_g.4
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d003713_T009:9 Zm00001d003713_T007:11 Zm00001d003713_T005:13 Zm00001d003713_T011:5 Zm00001d003713_T003:14 Zm00001d003713_T008:8 Zm00001d003713_T012:4 Zm00001d003713_T010:8 Zm00001d003713_T013:3 Zm00001d003713_T001:14 Zm00001d003713_T006:13 Zm00001d003713_T004:13

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCATAGGAATAATGATGAGCGAAGTTCTGACATGCGAGATCTGATGACTTCTTTCTCTGCGCTT
GAAGAGAAAGTCCTGGACCAATATACTTTTGCAAAGtgtcatagataataaatccctgcgattg
atcactgatgcttcagtaagttctccaatttcaagggagaagtctcaaggtttagatcccaata
tgcgaggt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2005
Transcript exons: 56085089-56085186,56085266-56085460,56085570-56085697,56
085780-56085938,56086466-56086570,56086856-56086930,5608
7219-56087356,56087444-56087626,56087953-56088108,560882
16-56088339,56088419-56088629,56089370-56089485,56089561
-56089783,56089901-56089994
TGTCATAGATAATAAATCCCTGCGATTGATCACTGATGCTTCAGTAAGTTCTCCAATTTCAAGG
GAGAAGTCTCAAGGTTTAGATCCCAATATGCGAGACAAAGTTATCTATTCATCTCCAAGTTTTG
ATCCCAAAGTTTTCCTTTCGTGGGTCCACAAAGACACAAGCGCTGCTGATTTAGAGGCTGGTGC
TCTCACTTTGAAAACTGATCTCAAAGGGAGAACACAGCAGAAAAAACAGTTAGTCAAGGAGAAC
TTTGATTGTTTTGTCTCGTGCAAAACTACAATAGATGACATTGAGTCAAAATTGAGACAGATAG
AGGAAGATCCTGAAGGTGCAGGTACTGCTCACTTGTATTCAGTGACACAAAAAATTAGTGGTGT
GGCGAATCGTGCATTTGAGCCTCTATTTGAGAGGCAGGCCCAAGCTGAAAAGATCAGATCTGTT
CAGGGAATGCTTCAAAGATTTCGGACACTATTTAACCTCCCAAGTGCAATCCGTGGGAACATTA
GAAAAGGAGAATATGATCTTGCTGTCAGAGAGTACCAAAAAGCAAAGTCAATTGTTCTTCCTTC
CCATGTGGGGATACTAAAACGTGTACTCGAAGAGGTCGAAAAGGTGATGCAGGAATTCAGAGGC
ATGCTTTATAAGTCCATGGAGGATCCTCACCTTGACTTTGCTGAGCTTGAGAACATTGTTCGTC
TACTGTTGGAGCTGGAACCTGAAACAGATCCAGTGTGGCATTATCTAAATATTCAGAATAGCAG
GATTCATGGATTGTTTGAAAAGTGTACTCAAGATCATGAATTGCGAATGGAAGTTTTGCAAAAT
AAAATTCGTGAAAAAGTGCTCTCTGATTCAAAGTGGAGGCAGCTGCAACAAGATTCAAATAAAT
CTCTGGAAGTTGATTCTGCCATTTGTGATTCTCCTCGAGCTGATCAGTTGTCAACAAACTTTAT
GGCTGAGGAAGCTGATAGTTTAAGGGCCACCTACACTCGTAGGCTAACTTCTGTGCTTATACAG
CATGTTCCAGCTTTCTGGAGATTAGCTTTATCTGTTTTCAGTGGAAAGTTTGCCAAGACAGCTT
CTGGTAATGTAGTTTCTGATTCTGACATGAATGCAAAGCCGTCTGCAAATAAGAACGATGACAA
AGGTGGAGATGTGAAGTACACAAACCACACTCTCGATGAAGTTGCTAGTATGGTTCGGGATACT
ATATCGGCTTTTGACACTAAGGTTCAGAGTACCTTCCGTGATTTCGAGGAATGCAACATTCTTT
GTCCATACATGAGTGACACTATAAAAGAAATAGCTAAGGCCTGTCAGACTCTTGAAGGGAAGGA
TTCATCTCCAACTGCTGTAAAATTGTTGCGCACCCTTCATTTTCAAATGACGAAGCTTTACGTT
CTACGGCTTTGTTCATGGATGCGGGCAACAACTAAGGAGATATCAAAAGATGATACTTGGGTTA
TTTTATCCACCCTTGAGAGAAACAAGTCTCCATATGCAATTTCATGCATGCCCCTGGAATTCCG
TGACATAATAATTTCAGCAATGGACCGGATTGATACTATGATTCTTAATCTGATGAGCGAGACT
GCGAAGTCATATGACATTTCTCAACCACTTCAGGAAATTAATGAGTCTGTCAGACTTGCATTTT
TGAATTCCTTTCTGGATTTTGCTGGTTATCTGGAGAGGTTTGGAGGTGAACTAACTGAGAACAG
GCCAAACAATGAAAACAATTATGTTCAAAATGGATACATAAATGGTACTAGAGAAACATCTGCT
AACACAGATGGAGATTTGCACAAAAAGCTGCTGGTTGTTTTGAGTAACATTGGATATTGTAAAG
CTGAACTTTCAGAAGAACTGTACACCACATATAGACACATTTGGTCTCCAGTCAGGAATAATGA
TGAGCGAAGTTCTGACATGCGAGATCTGATGACTTCTTTCTCTGCGCTTGAAGAGAAAGTCCTG
GACCAATATACTTTTGCAAAG
						
					

						Genomic sequence
						
							TGTCATAGATAATAAATCCCTGCGATTGATCACTGATGCTTCAGTAAGTTCTCCAATTTCAAGG
GAGAAGTCTCAAGGTTTAGATCCCAATATGCGAGGTAGGCCTGATGGTTTTACTGTAATTCTTC
TTGCATTTGATTCATGCTTATTAATAGTTCTATATTTGCACTTCTGCAGACAAAGTTATCTATT
CATCTCCAAGTTTTGATCCCAAAGTTTTCCTTTCGTGGGTCCACAAAGACACAAGCGCTGCTGA
TTTAGAGGCTGGTGCTCTCACTTTGAAAACTGATCTCAAAGGGAGAACACAGCAGAAAAAACAG
TTAGTCAAGGAGAACTTTGATTGTTTTGTCTCGTGCAAAACTACAATAGATGGTATTTACGCAA
TTATTAGATATGCCATGTTGCAGATAAATGTTCATGATCCTGAGTTTCTGGACATGGACAATGA
TTGCATCTCCTTGTAATACACAGTTTTATGCAGACATTGAGTCAAAATTGAGACAGATAGAGGA
AGATCCTGAAGGTGCAGGTACTGCTCACTTGTATTCAGTGACACAAAAAATTAGTGGTGTGGCG
AATCGTGCATTTGAGCCTCTATTTGAGAGGCAGGTATAGAAACTGAGCTTCTCTAGAACTACTG
CTATTGCTTCAACATTCCTTGAGTGCACTGAATTCTGAACTTCTGGTACAGGCCCAAGCTGAAA
AGATCAGATCTGTTCAGGGAATGCTTCAAAGATTTCGGACACTATTTAACCTCCCAAGTGCAAT
CCGTGGGAACATTAGAAAAGGAGAATATGATCTTGCTGTCAGAGAGTACCAAAAAGCAAAGTCA
ATTGTTCTTCCTTCCCATGTATGGCAACTTCCTATTTTATTTTATCTGCATATGTTATCCAATT
GGGTGGTGAAGCATGAAAGAATGAATGACACAGTATGGTGTATCGTGCACTCAATGAAATTAGG
TTAATGTCGTGTTCCAGATTTGTGTTAAGTTATATATTGACCATTTTATACACAATGGCTTACA
TATGTATCTCGTCGAATAAAGGTCTCCACAGTTAAATGTGAGTAACGGATAATCACTGAGCATG
GCTGATTTATGCAAAGATCTTGGAAATACTAGGTTTAACGATCTAGTAACTCATGAATACTTAA
TCCACTGAACTGACTTGTTTGTGTTTGGACCACTTGACAGTTTGATTTTGGTATCTTTTTGTTG
TAGAAAAGTATGTCTGATTCCATGCTGAACTGCTGAAGTATAGCACGTGCGAATTTCTTCACTG
TGTTTTGTGGCCCCATCGTTCGTTGTTAGGCACTATATTGGCACAGCAATAGATCTACTGCATT
TAGTATGTTTATGTTATGTTGAACAACCTGCAGGTGGGGATACTAAAACGTGTACTCGAAGAGG
TCGAAAAGGTGATGCAGGAATTCAGAGGCATGCTTTATAAGTCCATGGAGGATCCTCACCTTGA
CTTTGCTGAGGTTAGCGGAACATGTCTATAGTATCTATCTTTAGAGGCATTTAGAAATTACCTA
CTTTTGTTGACAGCGAAATATGGTTTAGCCTGCAAGTTTAGGTTTATGTATTATGGAACACAAC
CAGATAGAGAAAGCATAATAAAGGACAATTAACAAATGATTATAGGACACTGCTTCTTTAAAAT
GGACTACTTGATTTCCTAGTACTTAATTGAACTCTATTTTAAGAATGAAGTTATCTGAGGTTTT
TGTTCTGTTTGCTTACTGATTTTGTTCTTTACCATTCAGCTTGAGAACATTGTTCGTCTACTGT
TGGAGCTGGAACCTGAAACAGATCCAGTGTGGCATTATCTAAATATTCAGGTTGAATTTTAATC
TAAATATAGAAGGGCAGACCTAGTGCAGTGGTGAGAGCTGTCTCACCGAGTCACCAAGTCGTGG
GTTTGAAGCAGCCTCTCCTCATTTGCTGGAGGAAGGTTTTCCTCGGTTTATCCCTCTTTTGGAC
CTCACTCATGTGGGAGCCTCTGACACTGGGTCTGCCCTTCTTTTAATTTTAATCTAAATATGCA
TGCTGTAATGTAACTGAGCCTTTCAATTTTGTGACTTCTGTTTGTATTATCTTTTTACTTATAT
CATAATATTTCCTATCAGAATAGCAGGATTCATGGATTGTTTGAAAAGTGTACTCAAGATCATG
AATTGCGAATGGAAGTTTTGCAAAATAAAATTCGTGAAAAAGTGCTCTCTGATTCAAAGTGGAG
GCAGCTGCAACAAGATTCAAATAAATCTGTGAGCATATACTTTCTGTAGTTCGTCATATCATAT
TTACATGCAATTTTGTATCTTCCCTATGTTAACGTAGACCTTTTTGTTTAGCTGGAAGTTGATT
CTGCCATTTGTGATTCTCCTCGAGCTGATCAGTTGTCAACAAACTTTATGGCTGAGGAAGCTGA
TAGTTTAAGGGCCACCTACACTCGTAGGCTAACTTCTGTGCTTATACAGCATGTTCCAGCTTTC
TGGAGATTAGCTTTATCTGTTTTCAGTGGAAAGTTTGCCAAGGTAAGAACCTTATCAGTTGCAT
TACAATTTACAAGAAAAATGTAAATTGTTGACAGTGTAACTATATGGCTTGCGACACTAATAAG
TTTTTTTTTCACAAAGCAGATAGCTCTGCTGAACTGCAGAAACTTATAAACTCTTCCAGTCCTA
TGGTTGTGCAGTAGTAAACTGAAATTAAAGGGTATTTCTGATAATAACGGCCTGAATAATGATG
CCTACTTTACTCCATATTCATTGTGAAGAAGACAACGATCCTTCTTGTACTTATTTTTGTTTTG
AAAAGAGATTTTATGGATTTGCTAATTATATATATATTTTATTTTCAGACAGCTTCTGGTAATG
TAGTTTCTGATTCTGACATGAATGCAAAGCCGTCTGCAAATAAGAACGATGACAAAGGTGGAGA
TGTGAAGTACACAAACCACACTCTCGATGAAGTTGCTAGTATGGTTCGGGATACTATATCGGCT
TTTGACACTAAGGTGCAATTAGTGTGTTGTTAGGAATTTTAACATCAAATGTGATTGCTAGCAG
TAAGCATTTGATTGTATTAGTAATTTAACATGCTTTGTCAACAACACTACAACAGGTTCAGAGT
ACCTTCCGTGATTTCGAGGAATGCAACATTCTTTGTCCATACATGAGTGACACTATAAAAGAAA
TAGCTAAGGCCTGTCAGACTCTTGAAGGGAAGGATTCATCTCCAACTGCTGGTATTTGTCTCTT
AATTAGACCTTTTCCCAAATCTGCAAAGTTCGTCTTGTATCCTGAATGTGTTTACAATTATGCC
AGTAAAATTGTTGCGCACCCTTCATTTTCAAATGACGAAGCTTTACGTTCTACGGCTTTGTTCA
TGGATGCGGGCAACAACTAAGGAGATATCAAAAGATGATACTTGGGTTATTTTATCCACCCTTG
AGAGAAACAAGTCTCCATATGCAATTTCATGCATGCCCCTGGAATTCCGTGACATAATAATTTC
AGCAATGGACCGGATTGATACGTAAGACTGCTTTATTTATATGTCGTATTGCATCTTTTTGCAG
TTTCTTATCCTGCATTATTTCCAAAGCCCTTTGATTTTTTTTGCATTACTACTTTGCAATTGGC
CATCTTTTTTAATATCTACTCCCTCCATTCCAAATTATAAGACATCTTGGTTTTTCTAGATTCA
TAGCCTTTACAATGCACTTGGACATACACCATGTCTAGACACATAGTAAGAGCAATGTATCTAA
AAAACCAAAACGCCTTATAATTTGGAACGAAGGAAGTATTTGGGCTAATAGATAATTATTTCTT
TTGTTGCACTTAAGCAGTATTTCTTTTTGGCAGTAAGTATAGTTGTTACAGTGTCAGGATTCAG
GAAGGAATTTGTCTTACTGTGTTGTATAATTTTATTGCTACAGCAGTATATCTTAAATTGTTGT
AATGATCAAGCATAAGCTTTTGCCATTATTAATCTTTAGATTTCTGGTTATCCTGTCTTACCTA
TGAATGAATCCATTCACCTGAGTTTAAGGTTTGTGTCTCTTGTCTTTTGCTCTGCAAAATCTGA
AATTTGTCTTGAGCACAACCTTCTAAAGTGATGGCACATCAGTCTCCAGGCTCTGTGTTCAGTA
TATTCTAAATTCTACCCCCCTCTCTCTCCCTGCACTGCAAAATTTGGGAACAGCAAGTGCTTTC
CTGCCTTCATTGTTGGTAGTGCTGAACATGTCCCTAATCTGTGTTTGTTTATTTCAGTATGATT
CTTAATCTGATGAGCGAGACTGCGAAGTCATATGACATTTCTCAACCACTTCAGGAAATTAATG
AGTCTGTCAGACTTGCATTTTTGAATTCCTTTCTGGATTTTGCTGGTATGAATCTCTAAGTAGC
TAGAGGATTTTTTTAATTCTCTAGTCGTGGTCTGAAAATCTTTGACATTGCTTCAGGTTATCTG
GAGAGGTTTGGAGGTGAACTAACTGAGAACAGGCCAAACAATGAAAACAATTATGTTCAAAATG
GATACATAAATGGTACTAGAGAAACATCTGCTAACACAGATGGAGATTTGCACAAAAAGCTGCT
GGTTGTTTTGAGTAACATTGGATATTGTAAAGCTGAACTTTCAGAAGAACTGTACACCACATAT
AGACACATTTGGTCTCCAGTCAGGTACCTGATAGCATTCATGAAATTTTCGCCCTTTCCTTCGC
TGTGGGAAACCATGTACCCATTATAGAAGCTGTTCTCAAGGTATGTCTAATCCATTCAATGAAA
ATTTTATCATAGGAATAATGATGAGCGAAGTTCTGACATGCGAGATCTGATGACTTCTTTCTCT
GCGCTTGAAGAGAAAGTCCTGGACCAATATACTTTTGCAAAG
						
					

			
		

Sequences
Splice junction sequence	TCATAGGAATAATGATGAGCGAAGTTCTGACATGCGAGATCTGATGACTTCTTTCTCTGCGCTT GAAGAGAAAGTCCTGGACCAATATACTTTTGCAAAGtgtcatagataataaatccctgcgattg atcactgatgcttcagtaagttctccaatttcaagggagaagtctcaaggtttagatcccaata tgcgaggt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2005 Transcript exons: 56085089-56085186,56085266-56085460,56085570-56085697,56 085780-56085938,56086466-56086570,56086856-56086930,5608 7219-56087356,56087444-56087626,56087953-56088108,560882 16-56088339,56088419-56088629,56089370-56089485,56089561 -56089783,56089901-56089994 TGTCATAGATAATAAATCCCTGCGATTGATCACTGATGCTTCAGTAAGTTCTCCAATTTCAAGG GAGAAGTCTCAAGGTTTAGATCCCAATATGCGAGACAAAGTTATCTATTCATCTCCAAGTTTTG ATCCCAAAGTTTTCCTTTCGTGGGTCCACAAAGACACAAGCGCTGCTGATTTAGAGGCTGGTGC TCTCACTTTGAAAACTGATCTCAAAGGGAGAACACAGCAGAAAAAACAGTTAGTCAAGGAGAAC TTTGATTGTTTTGTCTCGTGCAAAACTACAATAGATGACATTGAGTCAAAATTGAGACAGATAG AGGAAGATCCTGAAGGTGCAGGTACTGCTCACTTGTATTCAGTGACACAAAAAATTAGTGGTGT GGCGAATCGTGCATTTGAGCCTCTATTTGAGAGGCAGGCCCAAGCTGAAAAGATCAGATCTGTT CAGGGAATGCTTCAAAGATTTCGGACACTATTTAACCTCCCAAGTGCAATCCGTGGGAACATTA GAAAAGGAGAATATGATCTTGCTGTCAGAGAGTACCAAAAAGCAAAGTCAATTGTTCTTCCTTC CCATGTGGGGATACTAAAACGTGTACTCGAAGAGGTCGAAAAGGTGATGCAGGAATTCAGAGGC ATGCTTTATAAGTCCATGGAGGATCCTCACCTTGACTTTGCTGAGCTTGAGAACATTGTTCGTC TACTGTTGGAGCTGGAACCTGAAACAGATCCAGTGTGGCATTATCTAAATATTCAGAATAGCAG GATTCATGGATTGTTTGAAAAGTGTACTCAAGATCATGAATTGCGAATGGAAGTTTTGCAAAAT AAAATTCGTGAAAAAGTGCTCTCTGATTCAAAGTGGAGGCAGCTGCAACAAGATTCAAATAAAT CTCTGGAAGTTGATTCTGCCATTTGTGATTCTCCTCGAGCTGATCAGTTGTCAACAAACTTTAT GGCTGAGGAAGCTGATAGTTTAAGGGCCACCTACACTCGTAGGCTAACTTCTGTGCTTATACAG CATGTTCCAGCTTTCTGGAGATTAGCTTTATCTGTTTTCAGTGGAAAGTTTGCCAAGACAGCTT CTGGTAATGTAGTTTCTGATTCTGACATGAATGCAAAGCCGTCTGCAAATAAGAACGATGACAA AGGTGGAGATGTGAAGTACACAAACCACACTCTCGATGAAGTTGCTAGTATGGTTCGGGATACT ATATCGGCTTTTGACACTAAGGTTCAGAGTACCTTCCGTGATTTCGAGGAATGCAACATTCTTT GTCCATACATGAGTGACACTATAAAAGAAATAGCTAAGGCCTGTCAGACTCTTGAAGGGAAGGA TTCATCTCCAACTGCTGTAAAATTGTTGCGCACCCTTCATTTTCAAATGACGAAGCTTTACGTT CTACGGCTTTGTTCATGGATGCGGGCAACAACTAAGGAGATATCAAAAGATGATACTTGGGTTA TTTTATCCACCCTTGAGAGAAACAAGTCTCCATATGCAATTTCATGCATGCCCCTGGAATTCCG TGACATAATAATTTCAGCAATGGACCGGATTGATACTATGATTCTTAATCTGATGAGCGAGACT GCGAAGTCATATGACATTTCTCAACCACTTCAGGAAATTAATGAGTCTGTCAGACTTGCATTTT TGAATTCCTTTCTGGATTTTGCTGGTTATCTGGAGAGGTTTGGAGGTGAACTAACTGAGAACAG GCCAAACAATGAAAACAATTATGTTCAAAATGGATACATAAATGGTACTAGAGAAACATCTGCT AACACAGATGGAGATTTGCACAAAAAGCTGCTGGTTGTTTTGAGTAACATTGGATATTGTAAAG CTGAACTTTCAGAAGAACTGTACACCACATATAGACACATTTGGTCTCCAGTCAGGAATAATGA TGAGCGAAGTTCTGACATGCGAGATCTGATGACTTCTTTCTCTGCGCTTGAAGAGAAAGTCCTG GACCAATATACTTTTGCAAAG
Genomic sequence	TGTCATAGATAATAAATCCCTGCGATTGATCACTGATGCTTCAGTAAGTTCTCCAATTTCAAGG GAGAAGTCTCAAGGTTTAGATCCCAATATGCGAGGTAGGCCTGATGGTTTTACTGTAATTCTTC TTGCATTTGATTCATGCTTATTAATAGTTCTATATTTGCACTTCTGCAGACAAAGTTATCTATT CATCTCCAAGTTTTGATCCCAAAGTTTTCCTTTCGTGGGTCCACAAAGACACAAGCGCTGCTGA TTTAGAGGCTGGTGCTCTCACTTTGAAAACTGATCTCAAAGGGAGAACACAGCAGAAAAAACAG TTAGTCAAGGAGAACTTTGATTGTTTTGTCTCGTGCAAAACTACAATAGATGGTATTTACGCAA TTATTAGATATGCCATGTTGCAGATAAATGTTCATGATCCTGAGTTTCTGGACATGGACAATGA TTGCATCTCCTTGTAATACACAGTTTTATGCAGACATTGAGTCAAAATTGAGACAGATAGAGGA AGATCCTGAAGGTGCAGGTACTGCTCACTTGTATTCAGTGACACAAAAAATTAGTGGTGTGGCG AATCGTGCATTTGAGCCTCTATTTGAGAGGCAGGTATAGAAACTGAGCTTCTCTAGAACTACTG CTATTGCTTCAACATTCCTTGAGTGCACTGAATTCTGAACTTCTGGTACAGGCCCAAGCTGAAA AGATCAGATCTGTTCAGGGAATGCTTCAAAGATTTCGGACACTATTTAACCTCCCAAGTGCAAT CCGTGGGAACATTAGAAAAGGAGAATATGATCTTGCTGTCAGAGAGTACCAAAAAGCAAAGTCA ATTGTTCTTCCTTCCCATGTATGGCAACTTCCTATTTTATTTTATCTGCATATGTTATCCAATT GGGTGGTGAAGCATGAAAGAATGAATGACACAGTATGGTGTATCGTGCACTCAATGAAATTAGG TTAATGTCGTGTTCCAGATTTGTGTTAAGTTATATATTGACCATTTTATACACAATGGCTTACA TATGTATCTCGTCGAATAAAGGTCTCCACAGTTAAATGTGAGTAACGGATAATCACTGAGCATG GCTGATTTATGCAAAGATCTTGGAAATACTAGGTTTAACGATCTAGTAACTCATGAATACTTAA TCCACTGAACTGACTTGTTTGTGTTTGGACCACTTGACAGTTTGATTTTGGTATCTTTTTGTTG TAGAAAAGTATGTCTGATTCCATGCTGAACTGCTGAAGTATAGCACGTGCGAATTTCTTCACTG TGTTTTGTGGCCCCATCGTTCGTTGTTAGGCACTATATTGGCACAGCAATAGATCTACTGCATT TAGTATGTTTATGTTATGTTGAACAACCTGCAGGTGGGGATACTAAAACGTGTACTCGAAGAGG TCGAAAAGGTGATGCAGGAATTCAGAGGCATGCTTTATAAGTCCATGGAGGATCCTCACCTTGA CTTTGCTGAGGTTAGCGGAACATGTCTATAGTATCTATCTTTAGAGGCATTTAGAAATTACCTA CTTTTGTTGACAGCGAAATATGGTTTAGCCTGCAAGTTTAGGTTTATGTATTATGGAACACAAC CAGATAGAGAAAGCATAATAAAGGACAATTAACAAATGATTATAGGACACTGCTTCTTTAAAAT GGACTACTTGATTTCCTAGTACTTAATTGAACTCTATTTTAAGAATGAAGTTATCTGAGGTTTT TGTTCTGTTTGCTTACTGATTTTGTTCTTTACCATTCAGCTTGAGAACATTGTTCGTCTACTGT TGGAGCTGGAACCTGAAACAGATCCAGTGTGGCATTATCTAAATATTCAGGTTGAATTTTAATC TAAATATAGAAGGGCAGACCTAGTGCAGTGGTGAGAGCTGTCTCACCGAGTCACCAAGTCGTGG GTTTGAAGCAGCCTCTCCTCATTTGCTGGAGGAAGGTTTTCCTCGGTTTATCCCTCTTTTGGAC CTCACTCATGTGGGAGCCTCTGACACTGGGTCTGCCCTTCTTTTAATTTTAATCTAAATATGCA TGCTGTAATGTAACTGAGCCTTTCAATTTTGTGACTTCTGTTTGTATTATCTTTTTACTTATAT CATAATATTTCCTATCAGAATAGCAGGATTCATGGATTGTTTGAAAAGTGTACTCAAGATCATG AATTGCGAATGGAAGTTTTGCAAAATAAAATTCGTGAAAAAGTGCTCTCTGATTCAAAGTGGAG GCAGCTGCAACAAGATTCAAATAAATCTGTGAGCATATACTTTCTGTAGTTCGTCATATCATAT TTACATGCAATTTTGTATCTTCCCTATGTTAACGTAGACCTTTTTGTTTAGCTGGAAGTTGATT CTGCCATTTGTGATTCTCCTCGAGCTGATCAGTTGTCAACAAACTTTATGGCTGAGGAAGCTGA TAGTTTAAGGGCCACCTACACTCGTAGGCTAACTTCTGTGCTTATACAGCATGTTCCAGCTTTC TGGAGATTAGCTTTATCTGTTTTCAGTGGAAAGTTTGCCAAGGTAAGAACCTTATCAGTTGCAT TACAATTTACAAGAAAAATGTAAATTGTTGACAGTGTAACTATATGGCTTGCGACACTAATAAG TTTTTTTTTCACAAAGCAGATAGCTCTGCTGAACTGCAGAAACTTATAAACTCTTCCAGTCCTA TGGTTGTGCAGTAGTAAACTGAAATTAAAGGGTATTTCTGATAATAACGGCCTGAATAATGATG CCTACTTTACTCCATATTCATTGTGAAGAAGACAACGATCCTTCTTGTACTTATTTTTGTTTTG AAAAGAGATTTTATGGATTTGCTAATTATATATATATTTTATTTTCAGACAGCTTCTGGTAATG TAGTTTCTGATTCTGACATGAATGCAAAGCCGTCTGCAAATAAGAACGATGACAAAGGTGGAGA TGTGAAGTACACAAACCACACTCTCGATGAAGTTGCTAGTATGGTTCGGGATACTATATCGGCT TTTGACACTAAGGTGCAATTAGTGTGTTGTTAGGAATTTTAACATCAAATGTGATTGCTAGCAG TAAGCATTTGATTGTATTAGTAATTTAACATGCTTTGTCAACAACACTACAACAGGTTCAGAGT ACCTTCCGTGATTTCGAGGAATGCAACATTCTTTGTCCATACATGAGTGACACTATAAAAGAAA TAGCTAAGGCCTGTCAGACTCTTGAAGGGAAGGATTCATCTCCAACTGCTGGTATTTGTCTCTT AATTAGACCTTTTCCCAAATCTGCAAAGTTCGTCTTGTATCCTGAATGTGTTTACAATTATGCC AGTAAAATTGTTGCGCACCCTTCATTTTCAAATGACGAAGCTTTACGTTCTACGGCTTTGTTCA TGGATGCGGGCAACAACTAAGGAGATATCAAAAGATGATACTTGGGTTATTTTATCCACCCTTG AGAGAAACAAGTCTCCATATGCAATTTCATGCATGCCCCTGGAATTCCGTGACATAATAATTTC AGCAATGGACCGGATTGATACGTAAGACTGCTTTATTTATATGTCGTATTGCATCTTTTTGCAG TTTCTTATCCTGCATTATTTCCAAAGCCCTTTGATTTTTTTTGCATTACTACTTTGCAATTGGC CATCTTTTTTAATATCTACTCCCTCCATTCCAAATTATAAGACATCTTGGTTTTTCTAGATTCA TAGCCTTTACAATGCACTTGGACATACACCATGTCTAGACACATAGTAAGAGCAATGTATCTAA AAAACCAAAACGCCTTATAATTTGGAACGAAGGAAGTATTTGGGCTAATAGATAATTATTTCTT TTGTTGCACTTAAGCAGTATTTCTTTTTGGCAGTAAGTATAGTTGTTACAGTGTCAGGATTCAG GAAGGAATTTGTCTTACTGTGTTGTATAATTTTATTGCTACAGCAGTATATCTTAAATTGTTGT AATGATCAAGCATAAGCTTTTGCCATTATTAATCTTTAGATTTCTGGTTATCCTGTCTTACCTA TGAATGAATCCATTCACCTGAGTTTAAGGTTTGTGTCTCTTGTCTTTTGCTCTGCAAAATCTGA AATTTGTCTTGAGCACAACCTTCTAAAGTGATGGCACATCAGTCTCCAGGCTCTGTGTTCAGTA TATTCTAAATTCTACCCCCCTCTCTCTCCCTGCACTGCAAAATTTGGGAACAGCAAGTGCTTTC CTGCCTTCATTGTTGGTAGTGCTGAACATGTCCCTAATCTGTGTTTGTTTATTTCAGTATGATT CTTAATCTGATGAGCGAGACTGCGAAGTCATATGACATTTCTCAACCACTTCAGGAAATTAATG AGTCTGTCAGACTTGCATTTTTGAATTCCTTTCTGGATTTTGCTGGTATGAATCTCTAAGTAGC TAGAGGATTTTTTTAATTCTCTAGTCGTGGTCTGAAAATCTTTGACATTGCTTCAGGTTATCTG GAGAGGTTTGGAGGTGAACTAACTGAGAACAGGCCAAACAATGAAAACAATTATGTTCAAAATG GATACATAAATGGTACTAGAGAAACATCTGCTAACACAGATGGAGATTTGCACAAAAAGCTGCT GGTTGTTTTGAGTAACATTGGATATTGTAAAGCTGAACTTTCAGAAGAACTGTACACCACATAT AGACACATTTGGTCTCCAGTCAGGTACCTGATAGCATTCATGAAATTTTCGCCCTTTCCTTCGC TGTGGGAAACCATGTACCCATTATAGAAGCTGTTCTCAAGGTATGTCTAATCCATTCAATGAAA ATTTTATCATAGGAATAATGATGAGCGAAGTTCTGACATGCGAGATCTGATGACTTCTTTCTCT GCGCTTGAAGAGAAAGTCCTGGACCAATATACTTTTGCAAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.101378442

Conservation Information
Conserved circRNAs	NA
PMCS	0.101378442

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							56085181-56085097(+)
56085096-56089739(-)
						
						Potential amino acid sequence
						
							MRDKVIYSSPSFDPKVFLSWVHKDTSAADLEAGALTLKTDLKGRTQQKKQLVKENFDCFVSCKT
TIDDIESKLRQIEEDPEGAGTAHLYSVTQKISGVANRAFEPLFERQAQAEKIRSVQGMLQRFRT
LFNLPSAIRGNIRKGEYDLAVREYQKAKSIVLPSHVGILKRVLEEVEKVMQEFRGMLYKSMEDP
HLDFAELENIVRLLLELEPETDPVWHYLNIQNSRIHGLFEKCTQDHELRMEVLQNKIREKVLSD
SKWRQLQQDSNKSLEVDSAICDSPRADQLSTNFMAEEADSLRATYTRRLTSVLIQHVPAFWRLA
LSVFSGKFAKTASGNVVSDSDMNAKPSANKNDDKGGDVKYTNHTLDEVASMVRDTISAFDTKVQ
STFRDFEECNILCPYMSDTIKEIAKACQTLEGKDSSPTAVKLLRTLHFQMTKLYVLRLCSWMRA
TTKEISKDDTWVILSTLERNKSPYAISCMPLEFRDIIISAMDRIDTMILNLMSETAKSYDISQP
LQEINESVRLAFLNSFLDFAGYLERFGGELTENRPNNENNYVQNGYINGTRETSANTDGDLHKK
LLVVLSNIGYCKAELSEELYTTYRHIWSPVRNNDERSSDMRDLMTSFSALEEKVLDQYTFAKCH
R*(+)
MTLCKSILVQDFLFKRRERSHQISHVRTSLIIIPDWRPNVSICGVQFF*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	56085181-56085097(+) 56085096-56089739(-)
Potential amino acid sequence	MRDKVIYSSPSFDPKVFLSWVHKDTSAADLEAGALTLKTDLKGRTQQKKQLVKENFDCFVSCKT TIDDIESKLRQIEEDPEGAGTAHLYSVTQKISGVANRAFEPLFERQAQAEKIRSVQGMLQRFRT LFNLPSAIRGNIRKGEYDLAVREYQKAKSIVLPSHVGILKRVLEEVEKVMQEFRGMLYKSMEDP HLDFAELENIVRLLLELEPETDPVWHYLNIQNSRIHGLFEKCTQDHELRMEVLQNKIREKVLSD SKWRQLQQDSNKSLEVDSAICDSPRADQLSTNFMAEEADSLRATYTRRLTSVLIQHVPAFWRLA LSVFSGKFAKTASGNVVSDSDMNAKPSANKNDDKGGDVKYTNHTLDEVASMVRDTISAFDTKVQ STFRDFEECNILCPYMSDTIKEIAKACQTLEGKDSSPTAVKLLRTLHFQMTKLYVLRLCSWMRA TTKEISKDDTWVILSTLERNKSPYAISCMPLEFRDIIISAMDRIDTMILNLMSETAKSYDISQP LQEINESVRLAFLNSFLDFAGYLERFGGELTENRPNNENNYVQNGYINGTRETSANTDGDLHKK LLVVLSNIGYCKAELSEELYTTYRHIWSPVRNNDERSSDMRDLMTSFSALEEKVLDQYTFAKCH R(+) MTLCKSILVQDFLFKRRERSHQISHVRTSLIIIPDWRPNVSICGVQFF(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d003713_circ_g.3

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