Splice junction sequence |
TTTTCTTTCAGATAAAGTTGCCTTTCAGAGGAAGAGGCATTGCTGGCCCACGTCAATTTCTGAT GATCGAAGACAGAAAAGGATTATTCACATATTAAAGattgttcactgcttacgtcttctgaaga gatttaatccagatgagtttaagccaaaaggtacaatctcaaactacaaacttggcaagaaagg cctggaaa
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 648 Transcript exons: 12573536-12573721,12575706-12576078,12576515-12576603 ATTGTTCACTGCTTACGTCTTCTGAAGAGATTTAATCCAGATGAGTTTAAGCCAAAAGGTACAA TCTCAAACTACAAACTTGGCAAGAAAGGCCTGGAAACTGATCAAGTCATGGAGCTTCCATTAGA CAACTGTATATATGATATGATCGATGCTCAAGGGCCAAAAGGCATAACCCTTATTGAGCTTGGC AAACGTCTTGGGGGAAAGTACAACAATTCGAAAGAGCTCCATGATCGAGTATCATCTATGCATG ATAGATTCAATCTGACTGTGGAGGTTGAAGTCGTTGGCAAAAGTAAACAGGGCAGAGTTTGGAC TTCAAAAAATTTTTCGCTGTACAATGCTACTCTGCGAAATTGTGATGTGCCAGATGATCATGAC TATTGTTCAGTATGGCCTCTCATTCCTTCTGAAGAACCGACTTCTGTTAGCCCATATGGTTTTG TGGTTAATAACAAACTCTTGTTTGAAGAAGATTGTCATGATGAACCACCCGTACATCGTCTCCT GAATAGCCATGAAGCTTGTGTTGGAGTTTCTCAACCAGTTGAACAAGATAAAGTTGCCTTTCAG AGGAAGAGGCATTGCTGGCCCACGTCAATTTCTGATGATCGAAGACAGAAAAGGATTATTCACA TATTAAAG
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Genomic sequence |
ATTGTTCACTGCTTACGTCTTCTGAAGAGATTTAATCCAGATGAGTTTAAGCCAAAAGGTACAA TCTCAAACTACAAACTTGGCAAGAAAGGCCTGGAAACTGATCAAGTCATGGAGCTTCCATTAGA CAACTGTATATATGATATGATCGATGCTCAAGGGCCAAAAGGCATAACCCTTATTGAGGTACCT CTCTGGACCTTTCAGCGGGGGAACTTTGGTGTAATATTCTTTTTTAATTATATATGCTAAATTT CTTCACAGCAACAAGAGTGCCTTCATATTCCTTGTTTCCAGAGTGCTATTCAGCATAATTTAAT GATTGAAAATATTCTTCATCTAACTTCCTCTGAGCTATTTGCGAACATATTGAAAATATTATCG AACAAAAAAAGAAATAATACCTCCCAAAAAACAAATTAACATTTACAGAAGGTCTGTGGCTCCA AGCTGCCCCACTGCCCAATGAAGGTTGGAATAGACCTTGCCACCACTTTTATAGTTCGTTTTTG TCGTTGCAAGTTTGGTATTTTTTTCTCTAGGTTGTGACTGAGAGGTTGGACACAATTGCAACAA CGACTGGGACTGGGTGTGGCGGTAGGTCGAGGGTTAAGGCTGCAACATTAGTTGAGCATAGTGG TTGAGGCATCAAATGGGCTGCTGCTGTGGAGCATCTGTGGTGTCGGCACCAAGAATAATGGCGA AGGCAAGAGGGCATGGTGGAACTGCTGCCATGGAGCATCTTTGTGGTGTTGGTCAAGAATAATG GTGAAGGCAAGAGGGCATGATGGAGCATGGGTAGTGATTGAGCAGAACGGAGGAGATTGTGCAG GTCGTAGGCAATGATAGCAGCTTGACATGTTATTGTGATATGACTTTTTCTTATCCGTGTTGAT GCTTGTGCATGAATCTAGTGAGCTAAAATTGTATGCGCTCAAACAAATTTGATAGAAGACTTCA ATATCATTCTGAAGACCTTTGTGGTCAGCGACTCAGCGTTGTTATCCCTCAATATGGGAGTTTC ATAAGCAATATAACAATTCACACATTTTGAAACTATTGTTTCCCTAATGGGCCCTTATCATTTC AAGCTAGTTGTTGTTGTTGTTATTTGGGGTTGGGAGAGGGGGGGTGGTAAATTCACTCTGGTCT AGGCTAGGGCCTGTGCGTACAGTTTCCAAATAATGATCATATACTCTATGTCTTGAAAAGAGCC AAAATTGTGATCTTGCTATCTTCAAACTATATAAAACATATCGTCCACATGTACACCTGTCCAC AGTTGTTTATGATGTAATTGTTTTTTTACCATTCTAGAAGTCGCACACATGTCTACATAAATCC ATCCACACAAGGTCAGCATACAGCGCACCAGCACCAGGGATGACTTGCTGTCTGTGTCTCACCA GGGGTTAAATCTCCAAAATAGATTTCAAGCCTAGCCGCTATGAACCACAATGGTCCTGGTGACA TGACTGTCGCCGCCTCAGAAACTTGTGATATGTATAGTGTGCTTCCAAATGATGGAGTAGAGAC TCAAAAGAGGGAAAAAACACTCTTTATGTAGTAGAATTGTAGAAATATGACCTTTGATAGAGTC TATACATCTGAGCTATCAGTAATCTCTCTATCTTATATCTTATGGGCAAGCAAATGCAAGCCTA TGACTATCCGGTGCAGCTTATCATGAGATGTTAGCCAGTTTTAGTCCTGCGCTGATTCTGTGTT GTATTTGGCTCATTTCTAGCATCATAACTTTTTTTTTGTTTGAGCTGCATTTCTAGCATCACAA GCATTTCTTTGTTTTTGTTTGAGCTACAATGGCATTAACTAATTTATTTCGTCCCGAACTTAAA TGAGATAGATATAAAATTCTTGCAATGACATTATCCTTCTTGGTGTAATCCCTAATGAAAATAG GCAAAACTCCCTGTCATGAAGACAATAATATATGGGCACATAAAGTTGGTTGAGTGTTGTTTTC TTTTCTCTAGTATGAATACATTTTTTCTGTTGAGGAAATTTCTTTGTTCATATTTGAGCTTTTA GAACCTAAGTATATTTATTTGAGATCCATCACAGCTGTATATTTATTTGCCTTTATTATTTTTA TATTATTGTTGTTGTTTATTGAAATCAGCAACTCTTGTTCTCATTAATTTCCAATCAGCTTGGC AAACGTCTTGGGGGAAAGTACAACAATTCGAAAGAGCTCCATGATCGAGTATCATCTATGCATG ATAGATTCAATCTGACTGTGGAGGTTGAAGTCGTTGGCAAAAGTAAACAGGGCAGAGTTTGGAC TTCAAAAAATTTTTCGCTGTACAATGCTACTCTGCGAAATTGTGATGTGCCAGATGATCATGAC TATTGTTCAGTATGGCCTCTCATTCCTTCTGAAGAACCGACTTCTGTTAGCCCATATGGTTTTG TGGTTAATAACAAACTCTTGTTTGAAGAAGATTGTCATGATGAACCACCCGTACATCGTCTCCT GAATAGCCATGAAGCTTGTGTTGGAGTTTCTCAACCAGTTGAACAAGGTACATCATTCTAAATT CCTGTCAGTTCTTTTTTTCTCTCTCTAAAATAGTGACACGATCATGCATTACAATGGGCCCATA TGACTGGGAATAGGCTGGGGGTGTGCATGTAGGATAAAACACATGATCCAACTTTTGTTTTTCT GTTAACCAACCACTTGGTTTTCTATCTTGTTTATCTGAAGAGGTGTTGGTACAACATGAGGGGA GGGTTGGACGGATGATTCCCCTTTTTATAGTAAGAAATTGTGCTTAGTGTTTCTTTGGAAACTA CTGTGCTGCTGTAAGAGCTTGTGGTCTCTGTGCCCATAGATCCAAAAGGCCCATAGAAAACCTA GAGTTTCAATCTTTGATGCATGAGCACCTTATTGAAATCAACAGAGTAGGACAGAGTACAGTTT TGCTCAATTAAGGTGATCCTTTTTTTTTCTTTCAGATAAAGTTGCCTTTCAGAGGAAGAGGCAT TGCTGGCCCACGTCAATTTCTGATGATCGAAGACAGAAAAGGATTATTCACATATTAAAG |