Detail information of 2_circ_ag.3


General Information
CircRNA Name 2_circ_ag.3
ID in PlantcircBase ath_circ_012826
Alias NA
Organism Arabidpsis thaliana
Position chr2: 1799451-1823537  JBrowse»
Reference genome TAIR10.38
Type   ag-circRNA
Identification method CIRI
Parent gene NA
Parent gene annotation NA
Parent gene strand NA
Alternative splicing AT2G05070_circ_g.1 AT2G05070_circ_g.2 2_circ_ag.3 AT2G05070_circ_g.4 AT2G05070_circ_g.5 2_circ_ag.6 2_circ_ag.7 2_circ_ag.8 2_circ_ag.9 2_circ_ag.10
Support reads 2
Tissues aerial
Exon boundary   No-No
Splicing signals   CT-AC
Number of exons covered NA
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   ACATAAGATAATTAATTTCCGGGGACAAAGTTAGTAGCGTAAGACCAGGCGTTGTTAGCCACAG
GATCAGCCAAATGATCAAATAAGTTCTCAATGGGACaaagttagtagcgtaagaccaggcgttg
ttagccacaggatcagccaaatgatcaaataagttctcaatgggacctttaccagtaacaatgg
cttggaca
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.
Conservation Information
Conserved circRNAs NA
PMCS 0.387018154
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Chu et al., 2017