Plant Circular RNA Database

Detail information of Os03g0291800_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os03g0291800_circ_g.3
					
						ID in PlantcircBase
						osa_circ_019311
					
						Alias
						Os03circ11859/Os_ciR599
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 10150146-10150886  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, find_circ
					
						Parent gene
						
							Os03g0291800						
					
						Parent gene annotation
						
							Similar to ESK1 (ESKIMO 1). (Os03t0291800-01);Similar to predict
ed protein. (Os03t0291800-02);Similar to ESK1 (ESKIMO 1). (Os03t
0291800-03)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os03g0291800_circ_g.2 Os03g0291800_circ_g.4 Os03g0291800_circ_g.5 Os03g0291800_circ_g.6 						
					
						Support reads
						3/51/45
					
						Tissues
						panicle/root/shoot, root, seed, pistil
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0291800-03:2
Os03t0291800-01:3
Os03t0291800-02:3

General Information
CircRNA Name	Os03g0291800_circ_g.3
ID in PlantcircBase	osa_circ_019311
Alias	Os03circ11859/Os_ciR599
Organism	Oryza sativa
Position	chr3: 10150146-10150886 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, find_circ
Parent gene	Os03g0291800
Parent gene annotation	Similar to ESK1 (ESKIMO 1). (Os03t0291800-01);Similar to predict ed protein. (Os03t0291800-02);Similar to ESK1 (ESKIMO 1). (Os03t 0291800-03)
Parent gene strand	+
Alternative splicing	Os03g0291800_circ_g.2 Os03g0291800_circ_g.4 Os03g0291800_circ_g.5 Os03g0291800_circ_g.6
Support reads	3/51/45
Tissues	panicle/root/shoot, root, seed, pistil
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0291800-03:2 Os03t0291800-01:3 Os03t0291800-02:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							Yes							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							F: CACCCTCGACATGAAAGTCC
 R: CTCGTGTGCGTAGAAGATGT
PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	Yes Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	F: CACCCTCGACATGAAAGTCC R: CTCGTGTGCGTAGAAGATGT PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGAC
CGTCTTCTTCATGAGCATGTCTCCCAACCACATCACgttcgacgcgaggctgctgctggagcgg
ctgcgcaacaagcggctgatgttcgtgggggattcgctgaaccgcaaccagtgggagtcgatgg
tgtgcctg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 139
Transcript exons: 10150146-10150198,10150801-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGAAGACGTGGGC
GAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCC
AACCACATCAC
Transcript length: 141
Transcript exons: 10150146-10150220,10150821-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACGACCGCAACATTGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTC
CCAACCACATCAC
Transcript length: 182
Transcript exons: 10150146-10150254,10150814-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCAGTGGGTCGACCGCAACAT
TGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC
Transcript length: 182
Transcript exons: 10150146-10150256,10150816-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTTGGGTCGACCGCAACAT
TGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC
Transcript length: 187
Transcript exons: 10150146-10150257,10150812-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGGAAGTGGGTCGACCGC
AACATTGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC
Transcript length: 193
Transcript exons: 10150146-10150233,10150782-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGGGCGTACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTC
GACCGCAACATTGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCA
C
Transcript length: 226
Transcript exons: 10150146-10150308,10150824-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA
AGACGCTCACCAAGTTCGTCAACGGCGGCAACAGCCCGCAACATTGACCCCAACCGGACGACCG
TCTTCTTCATGAGCATGTCTCCCAACCACATCAC
Transcript length: 230
Transcript exons: 10150146-10150273,10150785-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA
GTACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACG
ACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC
Transcript length: 232
Transcript exons: 10150146-10150263,10150773-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCCCGGCCCGTG
GCGTACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGA
CGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC
Transcript length: 242
Transcript exons: 10150146-10150251,10150751-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGCGACGGAGTACGTGGAGGTGGA
CCGGCCCGTGGCGTACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGAC
CCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC
Transcript length: 276
Transcript exons: 10150146-10150308,10150774-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA
AGACGCTCACCAAGTTCGTCAACGGCGGCAACAGCCGGCCCGTGGCGTACAAGGAGGTGCTCAA
GACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGACCGTCTTCTTCATGAGC
ATGTCTCCCAACCACATCAC
Transcript length: 279
Transcript exons: 10150146-10150301,10150764-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA
AGACGCTCACCAAGTTCGTCAACGGCGGGGAGGTGGACCGGCCCGTGGCGTACAAGGAGGTGCT
CAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGACCGTCTTCTTCATG
AGCATGTCTCCCAACCACATCAC
Transcript length: 290
Transcript exons: 10150146-10150311,10150763-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA
AGACGCTCACCAAGTTCGTCAACGGCGGCAACAGCAACTGGAGGTGGACCGGCCCGTGGCGTAC
AAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGACCG
TCTTCTTCATGAGCATGTCTCCCAACCACATCAC
Transcript length: 540
Transcript exons: 10150146-10150326,10150420-10150619,10150728-10150886
GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA
AGACGCTCACCAAGTTCGTCAACGGCGGCAACAGCAACATCTTCTACGCACACGAGTACAACGC
GACGGTGGAGTTCTACTGGGCGCCGTTCCTGGTGGAGTCGAACTCGGACAACCCGCAGGTGCAC
AGCGTCCCCGACCGCGTCATCCAGTGGCACTCCATCGCCAAGCACGCGCACAACTGGCTCGGCG
TCGACTACCTCATCTTCAACACCTACATCTGGTGGCTCAACACCCTCGACATGAAAGTCCTGAA
GGGGTCGTTCGACCAGGGTGCGACGGAGTACGTGGAGGTGGACCGGCCCGTGGCGTACAAGGAG
GTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGACCGTCTTCT
TCATGAGCATGTCTCCCAACCACATCAC
						
					

						Genomic sequence
						
							GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG
CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA
AGACGCTCACCAAGTTCGTCAACGGCGGCAACAGCAACATCTTCTACGCACACGTACGTAGCAG
GCATCAGCAACGTCACGTACGTACTCCGCTGTCGATCCGACATGATCTCCCCCTGACGATACGG
TGTATGTGCTACGTGCAGGAGTACAACGCGACGGTGGAGTTCTACTGGGCGCCGTTCCTGGTGG
AGTCGAACTCGGACAACCCGCAGGTGCACAGCGTCCCCGACCGCGTCATCCAGTGGCACTCCAT
CGCCAAGCACGCGCACAACTGGCTCGGCGTCGACTACCTCATCTTCAACACCTACATCTGGTGG
CTCAACACCCTCGACATGAAAGTCCTGTAAGTTGTACTCCTAGCACCCCAGCAGCGTACACACA
TACATATAGTGATATAGAAGTGGGTGTGCTGATCTGGGCGAAAAAATATGTGTGTGGTTGTACG
TGACAGGAAGGGGTCGTTCGACCAGGGTGCGACGGAGTACGTGGAGGTGGACCGGCCCGTGGCG
TACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGA
CCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC
						
					

			
		

Sequences
Splice junction sequence	ACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGAC CGTCTTCTTCATGAGCATGTCTCCCAACCACATCACgttcgacgcgaggctgctgctggagcgg ctgcgcaacaagcggctgatgttcgtgggggattcgctgaaccgcaaccagtgggagtcgatgg tgtgcctg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 139 Transcript exons: 10150146-10150198,10150801-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGAAGACGTGGGC GAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCC AACCACATCAC Transcript length: 141 Transcript exons: 10150146-10150220,10150821-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACGACCGCAACATTGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTC CCAACCACATCAC Transcript length: 182 Transcript exons: 10150146-10150254,10150814-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCAGTGGGTCGACCGCAACAT TGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC Transcript length: 182 Transcript exons: 10150146-10150256,10150816-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTTGGGTCGACCGCAACAT TGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC Transcript length: 187 Transcript exons: 10150146-10150257,10150812-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGGAAGTGGGTCGACCGC AACATTGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC Transcript length: 193 Transcript exons: 10150146-10150233,10150782-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGGGCGTACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTC GACCGCAACATTGACCCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCA C Transcript length: 226 Transcript exons: 10150146-10150308,10150824-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA AGACGCTCACCAAGTTCGTCAACGGCGGCAACAGCCCGCAACATTGACCCCAACCGGACGACCG TCTTCTTCATGAGCATGTCTCCCAACCACATCAC Transcript length: 230 Transcript exons: 10150146-10150273,10150785-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA GTACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACG ACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC Transcript length: 232 Transcript exons: 10150146-10150263,10150773-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCCCGGCCCGTG GCGTACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGA CGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC Transcript length: 242 Transcript exons: 10150146-10150251,10150751-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGCGACGGAGTACGTGGAGGTGGA CCGGCCCGTGGCGTACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGAC CCCAACCGGACGACCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC Transcript length: 276 Transcript exons: 10150146-10150308,10150774-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA AGACGCTCACCAAGTTCGTCAACGGCGGCAACAGCCGGCCCGTGGCGTACAAGGAGGTGCTCAA GACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGACCGTCTTCTTCATGAGC ATGTCTCCCAACCACATCAC Transcript length: 279 Transcript exons: 10150146-10150301,10150764-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA AGACGCTCACCAAGTTCGTCAACGGCGGGGAGGTGGACCGGCCCGTGGCGTACAAGGAGGTGCT CAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGACCGTCTTCTTCATG AGCATGTCTCCCAACCACATCAC Transcript length: 290 Transcript exons: 10150146-10150311,10150763-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA AGACGCTCACCAAGTTCGTCAACGGCGGCAACAGCAACTGGAGGTGGACCGGCCCGTGGCGTAC AAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGACCG TCTTCTTCATGAGCATGTCTCCCAACCACATCAC Transcript length: 540 Transcript exons: 10150146-10150326,10150420-10150619,10150728-10150886 GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA AGACGCTCACCAAGTTCGTCAACGGCGGCAACAGCAACATCTTCTACGCACACGAGTACAACGC GACGGTGGAGTTCTACTGGGCGCCGTTCCTGGTGGAGTCGAACTCGGACAACCCGCAGGTGCAC AGCGTCCCCGACCGCGTCATCCAGTGGCACTCCATCGCCAAGCACGCGCACAACTGGCTCGGCG TCGACTACCTCATCTTCAACACCTACATCTGGTGGCTCAACACCCTCGACATGAAAGTCCTGAA GGGGTCGTTCGACCAGGGTGCGACGGAGTACGTGGAGGTGGACCGGCCCGTGGCGTACAAGGAG GTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGACCGTCTTCT TCATGAGCATGTCTCCCAACCACATCAC
Genomic sequence	GTTCGACGCGAGGCTGCTGCTGGAGCGGCTGCGCAACAAGCGGCTGATGTTCGTGGGGGATTCG CTGAACCGCAACCAGTGGGAGTCGATGGTGTGCCTGGTCCAGTCCGTGATCCCCAAGGGCAAGA AGACGCTCACCAAGTTCGTCAACGGCGGCAACAGCAACATCTTCTACGCACACGTACGTAGCAG GCATCAGCAACGTCACGTACGTACTCCGCTGTCGATCCGACATGATCTCCCCCTGACGATACGG TGTATGTGCTACGTGCAGGAGTACAACGCGACGGTGGAGTTCTACTGGGCGCCGTTCCTGGTGG AGTCGAACTCGGACAACCCGCAGGTGCACAGCGTCCCCGACCGCGTCATCCAGTGGCACTCCAT CGCCAAGCACGCGCACAACTGGCTCGGCGTCGACTACCTCATCTTCAACACCTACATCTGGTGG CTCAACACCCTCGACATGAAAGTCCTGTAAGTTGTACTCCTAGCACCCCAGCAGCGTACACACA TACATATAGTGATATAGAAGTGGGTGTGCTGATCTGGGCGAAAAAATATGTGTGTGGTTGTACG TGACAGGAAGGGGTCGTTCGACCAGGGTGCGACGGAGTACGTGGAGGTGGACCGGCCCGTGGCG TACAAGGAGGTGCTCAAGACGTGGGCGAAGTGGGTCGACCGCAACATTGACCCCAACCGGACGA CCGTCTTCTTCATGAGCATGTCTCCCAACCACATCAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_004744* osi_circ_012857 						
					
						PMCS
						0.556993151

Conservation Information
Conserved circRNAs	osi_circ_004744* osi_circ_012857
PMCS	0.556993151

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							10150193-10150883(+)
10150315-10150583(-)
						
						Potential amino acid sequence
						
							MFVGDSLNRNQWESMVCLVQSVIPKGKKTLTKFVNGGNSNIFYAHEYNATVEFYWAPFLVESNS
DNPQVHSVPDRVIQWHSIAKHAHNWLGVDYLIFNTYIWWLNTLDMKVLKGSFDQGATEYVEVDR
PVAYKEVLKTWAKWVDRNIDPNRTTVFFMSMSPNHITFDARLLLERLRNKRLMFVGDSLNRNQW
ESMVCLVQSVIPKGKKTLTKFVNGGNSNIFYAHEYNATVEFYWAPFLVESNSDNPQVHSVPDRV
IQWHSIAKHAHNWLGVDYLIFNTYIWWLNTLDMKVLKGSFDQGATEYVEVDRPVAYKEVLKTWA
KWVDRNIDPNRTTVFFMSMSPNHITFDARLLLERLRNKRLMFVGDSLNRNQWESMVCLVQSVIP
KGKKTLTKFVNGGNSNIFYAHEYNATVEFYWAPFLVESNSDNPQVHSVPDRVIQWHSIAKHAHN
WLGVDYLIFNTYIWWLNTLDMKVLKGSFDQGATEYVEVDRPVAYKEVLKTWAKWVDRNIDPNRT
TVFFMSMSPNHITFDARLLLERLRNKRLMFVGDSLNRNQWESMVCLVQSVIPKGKKTLTKFVNG
GNSNIFYAHEYNATVEFYWAPFLVESNSDNPQVHSVPDRVIQWHSIAKHAHNWLGVDYLIFNTY
IWWLNTLDMKVLKGSFDQGATEYVEVDRPVAYKEVLKTWAKWVDRNIDPNRTTVFFMSMSPNHI
(+)
MLLLPPLTNLVSVFLPLGITDWTRHTIDSHWLRFSESPTNISRLLRSRSSSSLASNVMWLGDML
MKKTVVRLGSMLRSTHFAHVLSTSLYATGRSTSTYSVAPWSNDPFRTFMSRVLSHQM*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	10150193-10150883(+) 10150315-10150583(-)
Potential amino acid sequence	MFVGDSLNRNQWESMVCLVQSVIPKGKKTLTKFVNGGNSNIFYAHEYNATVEFYWAPFLVESNS DNPQVHSVPDRVIQWHSIAKHAHNWLGVDYLIFNTYIWWLNTLDMKVLKGSFDQGATEYVEVDR PVAYKEVLKTWAKWVDRNIDPNRTTVFFMSMSPNHITFDARLLLERLRNKRLMFVGDSLNRNQW ESMVCLVQSVIPKGKKTLTKFVNGGNSNIFYAHEYNATVEFYWAPFLVESNSDNPQVHSVPDRV IQWHSIAKHAHNWLGVDYLIFNTYIWWLNTLDMKVLKGSFDQGATEYVEVDRPVAYKEVLKTWA KWVDRNIDPNRTTVFFMSMSPNHITFDARLLLERLRNKRLMFVGDSLNRNQWESMVCLVQSVIP KGKKTLTKFVNGGNSNIFYAHEYNATVEFYWAPFLVESNSDNPQVHSVPDRVIQWHSIAKHAHN WLGVDYLIFNTYIWWLNTLDMKVLKGSFDQGATEYVEVDRPVAYKEVLKTWAKWVDRNIDPNRT TVFFMSMSPNHITFDARLLLERLRNKRLMFVGDSLNRNQWESMVCLVQSVIPKGKKTLTKFVNG GNSNIFYAHEYNATVEFYWAPFLVESNSDNPQVHSVPDRVIQWHSIAKHAHNWLGVDYLIFNTY IWWLNTLDMKVLKGSFDQGATEYVEVDRPVAYKEVLKTWAKWVDRNIDPNRTTVFFMSMSPNHI (+) MLLLPPLTNLVSVFLPLGITDWTRHTIDSHWLRFSESPTNISRLLRSRSSSSLASNVMWLGDML MKKTVVRLGSMLRSTHFAHVLSTSLYATGRSTSTYSVAPWSNDPFRTFMSRVLSHQM*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os03g0291800_circ_g.3

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