Plant Circular RNA Database

Detail information of Zm00001d040470_circ_g.3

			
						 General Information
					
						CircRNA Name
						Zm00001d040470_circ_g.3
					
						ID in PlantcircBase
						zma_circ_007562
					
						Alias
						zma_circ_0001454, GRMZM2G096548_C1
					
						Organism
						
							Zea mays						
					
						Position
						
							chr3: 45280592-45284884  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ, CIRI2
					
						Parent gene
						
							Zm00001d040470						
					
						Parent gene annotation
						
							Exonuclease domain-containing protein 1
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d040470_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d040470_T002:2
Zm00001d040470_T015:2
Zm00001d040470_T013:2
Zm00001d040470_T018:2
Zm00001d040470_T012:2
Zm00001d040470_T014:2
Zm00001d040470_T011:2
Zm00001d040470_T001:2
Zm00001d040470_T009:2
Zm00001d040470_T007:2
Zm00001d040470_T004:2
Zm00001d040470_T017:2
Zm00001d040470_T006:2
Zm00001d040470_T016:1

General Information
CircRNA Name	Zm00001d040470_circ_g.3
ID in PlantcircBase	zma_circ_007562
Alias	zma_circ_0001454, GRMZM2G096548_C1
Organism	Zea mays
Position	chr3: 45280592-45284884 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ, CIRI2
Parent gene	Zm00001d040470
Parent gene annotation	Exonuclease domain-containing protein 1
Parent gene strand	-
Alternative splicing	Zm00001d040470_circ_g.2
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d040470_T002:2 Zm00001d040470_T015:2 Zm00001d040470_T013:2 Zm00001d040470_T018:2 Zm00001d040470_T012:2 Zm00001d040470_T014:2 Zm00001d040470_T011:2 Zm00001d040470_T001:2 Zm00001d040470_T009:2 Zm00001d040470_T007:2 Zm00001d040470_T004:2 Zm00001d040470_T017:2 Zm00001d040470_T006:2 Zm00001d040470_T016:1

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGAAACCCTTCAACACCACCTATCTGCTCTGGAGAGTTATACTGAGAAATATTTGGCTTGAGGC
ACCCTAGTGGTGCCTCATTATTAACTTGCATTTCCTctgttaaaataagggggcttcctgattc
tcttaaatctgcattccgactccagcattatacggcagtcccagttagaccaggtcacaatagc
aaagtttg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 763
Transcript exons: 45280592-45280767,45284298-45284884
CTGTTAAAATAAGGGGGCTTCCTGATTCTCTTAAATCTGCATTCCGACTCCAGCATTATACGGC
AGTCCCAGTTAGACCAGGTCACAATAGCAAAGTTTGTGTTCTTGATGCCCTTGTCCTCTAGCCA
TTTATCGTGCATGAGTAAGGCTTCACCTAGAGGCACACCTCTGTCCACCTGAATCTGTTGTATG
CCAGTAAGCTCCTTGCAAAAATCAGTCAAAAATTGATGATACGTCGGCCGAACATATGTTTGGA
AGCATTCTTCGAGTTTTCCAGTTGCACTGTTAACCAAGACAGATGGAAACTCGATGATTTCTTG
TGGAAATGGATTGTTCACCTTGTCACAGGTTGCTTCAAAGTCAATAACCACAAAATACTGAAAT
TCCTGAAGCTGTGCATCATGGGGGTGACCTTGAGGGAGCATCTTGAATGGAAGATATTGAACCC
TGTTCTCAATAGGGAAACCGTGGTCCCTATTTATCTGATAAAATTGGTTGTCAAAACCATAAGG
TAGTGGCTGACGCACGATTTGATAATCTGAATAAATATATGGCCAGGCATAAAATTCTTGTCGG
TAGATGGGCCTGCTAAGGCCTTGGTTTGGAGTCGCCTCCCAGATTTTTTCCGCAGCAACAATAT
CATTCCTTTTTTCATTATTCTCAGGAAACCCTTCAACACCACCTATCTGCTCTGGAGAGTTATA
CTGAGAAATATTTGGCTTGAGGCACCCTAGTGGTGCCTCATTATTAACTTGCATTTCCT
						
					

						Genomic sequence
						
							CTGTTAAAATAAGGGGGCTTCCTGATTCTCTTAAATCTGCATTCCGACTCCAGCATTATACGGC
AGTCCCAGTTAGACCAGGTCACAATAGCAAAGTTTGTGTTCTTGATGCCCTTGTCCTCTAGCCA
TTTATCGTGCATGAGTAAGGCTTCACCTAGAGGCACACCTCTGTCCACCTACACATGCATGGAT
CTTGTTCATATGACAACAATAATATTCAAAACTGGCACACAACGATAATGCCACGGAACCAGTG
GTTTCACACATGGATTGTGTTCAAAGTGTGAAACAAAAACGAAGGTACACAAAACAAAGGTGAT
CCCTTTATTTGCTGAATGTATTTACTAAACAAATATTGAACTGCAAAACTCCAGCACCAACATT
CCAACTAGAAATAACCAAAATGTATAATAACTAATACTACAGTGGTAATATTTCAATTAAATAA
TAGAAGGATTAAATTGAACAGTTAGTAAGAGCTTGTTATCTGCTAGCCTTGAAAGCTAAGGAGC
AAAGCTACATCGTCATCAAAATAGCAGCATTTTCTTTCAGAAGAGGAAAGAAAGACTTCCTTAC
AGTTTTTAGTTTACAGACCAATTTCTAGTTTTTTTTCTCGAACGCGCGCAGGAGAGCTGCACAT
CATTATATTAAGAAAAGGGGTCCAAATTAGACCAACAGTCACCAAAATGGACCAATTTCTAGTT
AAAAGCATGGTTTTCAAATCGTCCGATTAATCACGATTAATTGTCTTGGTCGGTCACATGAAGT
CGATTAGGGGCTCCGACCCAATTAGGTTGGACGAGTAATCATCGCCTAATCGCGACTAATCGGC
CGATTAGGTATTTGCTGCGATTAGAAGTTGTGAGCATGGAAAGCCAGCGCTGGGTCCAAATTTG
TGCCTCGGATGCCTTATTTATTGGGACTAATAAAGGAACCATTTAGCTGATTGGCTGGCTTTCC
AAATCTGTGTTCCCTCTCTGTCTCTTCTCCTTCCTAGCCAGCCGGCTGCTAATCCATCATTCCT
AGGCTCCAGGCGACTCCTCATTCCTCCTCCCTGAAAAAACATATGTCTGCTGATCCTTGACCAA
CTCTGATGGCTAATCCCTGATCAAGAAGACAAGAACCACCTGCTCCTCCAGTCCTTGACCAACT
CCGGCGACTACTTCACTCCCTGACCAACTCTGGCGGGCGACTCCTCTGTGATCAAGAAGGCAAG
AACTCAAGAAGATGAGTACCTCATCTGAAGGTAACATGATCCCTGTCCCTGATCAAGCATGTAA
TACCTCATCTATAGTACACCATCACAGTTTGGTTTCAGTTTAGAATTATTAGATCCACCTTTTC
TCCTTGTTCAGTTTAGCATTCAGTTTGGTTTCAGTACTACACAAATATGATCCACCTTTTCTCC
TTGTTCAGTTTTAGCATTCAGTTTGGTTTCAGCTGTAGTTTTGATTACCTACTGCTGTTTGAAG
TATATTATATAGTATATAACTATACACTTTAGTGTATATAACTATATATAATTATATATGTCCT
TGTTAGTACAGGACGTTTAGGATGACTAGGTGGACGACCTGTCACCGATTAATTGGCCTGGTCA
ACGTCCTAATAGTGATTAATTGCCTATAATTGGTCACCATCAACGACCTAGCGACCAGGCGACT
TTTTTTCCTCAAATACGCAGGAGAGCTGTGTATCATTATATTAAGAAGGAAAAGGGGTGAGGTG
TTAAAAAACCTCGTACAACTCTACACAAAACCACACACTATAGTCTAGGATGTGATGTCCGCAG
GCCACAGGGCTCCATTAGGTATGGCCTCTCCACCTCCCAACCCCGTCCCCTCTCCCCCGCCCTT
CCACCACCACCCTACACCACCACCTCTCTCCGGACTCCACCCCGGACTTGTTTAATGTGATATA
CCAGAGTTGTAAACTGAGTTGAAAACTCTGCAGCTGAACCAGTTTGTTTCAATGTCAGTAACTC
TAGCATTTTATCAGAGTGGGTGTATAAATCAAATTCTCCCAGCACCGCCTGACTAAAATGGTTC
CAATCCACAAATAGTATTGACTCTCTGCAAGCCTGAAACCAGTGAGCAGCCCTCCCCTTCAAAT
GCATGGATGCTGCACTGATCTTAAATTCCTCAGGAATTTGATACAAGGTAAAATATGCAGCACA
ATTATGCAACCAAAATTCTAGCATATGTGCCTTCAAACTGTGGAAATTCCTTCTTAGGCAATCA
TTGTCTTCGATTGGCACCATCAGAACTCGAGGATTCATGCTCGTTGTTACCCCCAAACTCATGC
ACCACCGGTTGCGTCGGTTCAGGATGCGATACCTGAGATATCGGCGGCGGAGGAAAAGGGTGTG
CATCCATCAACCCAGCACTGTAACTCGGCATCGACGTGCGCGCAGCTAAAGCTGGAATTAGGTT
GCAGCTGACACCGTGTTGGAGAGGCGCGTCTGATCCTAGGCTACCTGCGCCAATGATTTCATGG
AGAGATCGATCTTGGCCTGTAGAAATTGCACTTCCTTCTCGTGACCCATCTGTCTCTTCTCAAT
TTCAGCCAATTTGTTGTGCAATGAACCGAGTCCATCGATCTTCTTGGACAGTTCCTGGAGAGCC
CGCAGAGGTGTCCAACACCTGCTGAAACTTGGTCACCAACCTCTTCTCGACATCTTCCATGGCC
GCCATCATGTGCTGCGTCTGCACGGAAGGACGACTCGGCGCCGTTGTAGCAGACGAGCTGTGTC
GCCGAGAAGTAGAACACCGCATGACCAACGCTCTAGGAACTCCGCCAGAACGAAGAGGAGCCTG
AATCTGTTACCACTTGTGATGTCAGCAGGCCACAGCGTGCAGGACTCACCACGTCGGTTTGGGA
AGCAGCAGTAGATGAGGAAGAAGGAATATTAAGAAGGAGCAGAGCGAACAGAAATTTGGGGAAG
AGGACGGTAAGTCTGTTATTTTCCTTCCTGAGTTCTCATACAGCCTCTTCTTACACTTTTATAC
TGACTACTAATGGGATAACAAAATATACGGCCCAAGCCTCTATTACAAGAATCCATCAAGGATT
AGACTCTACTCTTCTTACTCAGTAGAACTTGTTGAGCGCAAATGAACGAGGCCTGACATAGGTG
CATTTATACAAGAGAAGGACTGGACCCTACATCATGCAGAATTGCAGACTGGAGACCAAATCAC
CAAATGGAGACCAGGTGACTTGAAAACTATGGTTAAAAGATGTCTTGTTGGTATCAAGAAATTT
TGTTGGTATATGCACCATATGTGCCATTGTGCCCATGCATCTAACATTGTTTCTTTGTCAATTT
ATTAGCCCCTATTATCTCAAATTCCTGGTCCCACCCATTGCCACACACCACACGTACAAACTAT
GGGTCATAATTCATAAACAGGTCTTTATGTTCGTCAGCATCTAAAGGGTGAACAAAAAATGTTA
GCTTATTTAATCTGGTTATAACAGACATTAGATCAGCATTTCCAAAGGTAGCTTGAAATTCAAA
GTAAGCTATTTGTGTGTTTATATAACTTGTATAGTTGACATTGCATTGAAAATAATTGGTTCCT
TGCTTTATATACACTTGAGTATATGACTAGTCAGTCAACACACAAAATTCTATTAGCCTAAGCT
ATCATGATGACACTTATTCAGTACTATGACCTCATGATTATTCAGATTATGCACTAACCTGAAT
CTGTTGTATGCCAGTAAGCTCCTTGCAAAAATCAGTCAAAAATTGATGATACGTCGGCCGAACA
TATGTTTGGAAGCATTCTTCGAGTTTTCCAGTTGCACTGTTAACCAAGACAGATGGAAACTCGA
TGATTTCTTGTGGAAATGGATTGTTCACCTTGTCACAGGTTGCTTCAAAGTCAATAACCACAAA
ATACTGAAATTCCTGAAGCTGTGCATCATGGGGGTGACCTTGAGGGAGCATCTTGAATGGAAGA
TATTGAACCCTGTTCTCAATAGGGAAACCGTGGTCCCTATTTATCTGATAAAATTGGTTGTCAA
AACCATAAGGTAGTGGCTGACGCACGATTTGATAATCTGAATAAATATATGGCCAGGCATAAAA
TTCTTGTCGGTAGATGGGCCTGCTAAGGCCTTGGTTTGGAGTCGCCTCCCAGATTTTTTCCGCA
GCAACAATATCATTCCTTTTTTCATTATTCTCAGGAAACCCTTCAACACCACCTATCTGCTCTG
GAGAGTTATACTGAGAAATATTTGGCTTGAGGCACCCTAGTGGTGCCTCATTATTAACTTGCAT
TTCCT
						
					

			
		

Sequences
Splice junction sequence	GGAAACCCTTCAACACCACCTATCTGCTCTGGAGAGTTATACTGAGAAATATTTGGCTTGAGGC ACCCTAGTGGTGCCTCATTATTAACTTGCATTTCCTctgttaaaataagggggcttcctgattc tcttaaatctgcattccgactccagcattatacggcagtcccagttagaccaggtcacaatagc aaagtttg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 763 Transcript exons: 45280592-45280767,45284298-45284884 CTGTTAAAATAAGGGGGCTTCCTGATTCTCTTAAATCTGCATTCCGACTCCAGCATTATACGGC AGTCCCAGTTAGACCAGGTCACAATAGCAAAGTTTGTGTTCTTGATGCCCTTGTCCTCTAGCCA TTTATCGTGCATGAGTAAGGCTTCACCTAGAGGCACACCTCTGTCCACCTGAATCTGTTGTATG CCAGTAAGCTCCTTGCAAAAATCAGTCAAAAATTGATGATACGTCGGCCGAACATATGTTTGGA AGCATTCTTCGAGTTTTCCAGTTGCACTGTTAACCAAGACAGATGGAAACTCGATGATTTCTTG TGGAAATGGATTGTTCACCTTGTCACAGGTTGCTTCAAAGTCAATAACCACAAAATACTGAAAT TCCTGAAGCTGTGCATCATGGGGGTGACCTTGAGGGAGCATCTTGAATGGAAGATATTGAACCC TGTTCTCAATAGGGAAACCGTGGTCCCTATTTATCTGATAAAATTGGTTGTCAAAACCATAAGG TAGTGGCTGACGCACGATTTGATAATCTGAATAAATATATGGCCAGGCATAAAATTCTTGTCGG TAGATGGGCCTGCTAAGGCCTTGGTTTGGAGTCGCCTCCCAGATTTTTTCCGCAGCAACAATAT CATTCCTTTTTTCATTATTCTCAGGAAACCCTTCAACACCACCTATCTGCTCTGGAGAGTTATA CTGAGAAATATTTGGCTTGAGGCACCCTAGTGGTGCCTCATTATTAACTTGCATTTCCT
Genomic sequence	CTGTTAAAATAAGGGGGCTTCCTGATTCTCTTAAATCTGCATTCCGACTCCAGCATTATACGGC AGTCCCAGTTAGACCAGGTCACAATAGCAAAGTTTGTGTTCTTGATGCCCTTGTCCTCTAGCCA TTTATCGTGCATGAGTAAGGCTTCACCTAGAGGCACACCTCTGTCCACCTACACATGCATGGAT CTTGTTCATATGACAACAATAATATTCAAAACTGGCACACAACGATAATGCCACGGAACCAGTG GTTTCACACATGGATTGTGTTCAAAGTGTGAAACAAAAACGAAGGTACACAAAACAAAGGTGAT CCCTTTATTTGCTGAATGTATTTACTAAACAAATATTGAACTGCAAAACTCCAGCACCAACATT CCAACTAGAAATAACCAAAATGTATAATAACTAATACTACAGTGGTAATATTTCAATTAAATAA TAGAAGGATTAAATTGAACAGTTAGTAAGAGCTTGTTATCTGCTAGCCTTGAAAGCTAAGGAGC AAAGCTACATCGTCATCAAAATAGCAGCATTTTCTTTCAGAAGAGGAAAGAAAGACTTCCTTAC AGTTTTTAGTTTACAGACCAATTTCTAGTTTTTTTTCTCGAACGCGCGCAGGAGAGCTGCACAT CATTATATTAAGAAAAGGGGTCCAAATTAGACCAACAGTCACCAAAATGGACCAATTTCTAGTT AAAAGCATGGTTTTCAAATCGTCCGATTAATCACGATTAATTGTCTTGGTCGGTCACATGAAGT CGATTAGGGGCTCCGACCCAATTAGGTTGGACGAGTAATCATCGCCTAATCGCGACTAATCGGC CGATTAGGTATTTGCTGCGATTAGAAGTTGTGAGCATGGAAAGCCAGCGCTGGGTCCAAATTTG TGCCTCGGATGCCTTATTTATTGGGACTAATAAAGGAACCATTTAGCTGATTGGCTGGCTTTCC AAATCTGTGTTCCCTCTCTGTCTCTTCTCCTTCCTAGCCAGCCGGCTGCTAATCCATCATTCCT AGGCTCCAGGCGACTCCTCATTCCTCCTCCCTGAAAAAACATATGTCTGCTGATCCTTGACCAA CTCTGATGGCTAATCCCTGATCAAGAAGACAAGAACCACCTGCTCCTCCAGTCCTTGACCAACT CCGGCGACTACTTCACTCCCTGACCAACTCTGGCGGGCGACTCCTCTGTGATCAAGAAGGCAAG AACTCAAGAAGATGAGTACCTCATCTGAAGGTAACATGATCCCTGTCCCTGATCAAGCATGTAA TACCTCATCTATAGTACACCATCACAGTTTGGTTTCAGTTTAGAATTATTAGATCCACCTTTTC TCCTTGTTCAGTTTAGCATTCAGTTTGGTTTCAGTACTACACAAATATGATCCACCTTTTCTCC TTGTTCAGTTTTAGCATTCAGTTTGGTTTCAGCTGTAGTTTTGATTACCTACTGCTGTTTGAAG TATATTATATAGTATATAACTATACACTTTAGTGTATATAACTATATATAATTATATATGTCCT TGTTAGTACAGGACGTTTAGGATGACTAGGTGGACGACCTGTCACCGATTAATTGGCCTGGTCA ACGTCCTAATAGTGATTAATTGCCTATAATTGGTCACCATCAACGACCTAGCGACCAGGCGACT TTTTTTCCTCAAATACGCAGGAGAGCTGTGTATCATTATATTAAGAAGGAAAAGGGGTGAGGTG TTAAAAAACCTCGTACAACTCTACACAAAACCACACACTATAGTCTAGGATGTGATGTCCGCAG GCCACAGGGCTCCATTAGGTATGGCCTCTCCACCTCCCAACCCCGTCCCCTCTCCCCCGCCCTT CCACCACCACCCTACACCACCACCTCTCTCCGGACTCCACCCCGGACTTGTTTAATGTGATATA CCAGAGTTGTAAACTGAGTTGAAAACTCTGCAGCTGAACCAGTTTGTTTCAATGTCAGTAACTC TAGCATTTTATCAGAGTGGGTGTATAAATCAAATTCTCCCAGCACCGCCTGACTAAAATGGTTC CAATCCACAAATAGTATTGACTCTCTGCAAGCCTGAAACCAGTGAGCAGCCCTCCCCTTCAAAT GCATGGATGCTGCACTGATCTTAAATTCCTCAGGAATTTGATACAAGGTAAAATATGCAGCACA ATTATGCAACCAAAATTCTAGCATATGTGCCTTCAAACTGTGGAAATTCCTTCTTAGGCAATCA TTGTCTTCGATTGGCACCATCAGAACTCGAGGATTCATGCTCGTTGTTACCCCCAAACTCATGC ACCACCGGTTGCGTCGGTTCAGGATGCGATACCTGAGATATCGGCGGCGGAGGAAAAGGGTGTG CATCCATCAACCCAGCACTGTAACTCGGCATCGACGTGCGCGCAGCTAAAGCTGGAATTAGGTT GCAGCTGACACCGTGTTGGAGAGGCGCGTCTGATCCTAGGCTACCTGCGCCAATGATTTCATGG AGAGATCGATCTTGGCCTGTAGAAATTGCACTTCCTTCTCGTGACCCATCTGTCTCTTCTCAAT TTCAGCCAATTTGTTGTGCAATGAACCGAGTCCATCGATCTTCTTGGACAGTTCCTGGAGAGCC CGCAGAGGTGTCCAACACCTGCTGAAACTTGGTCACCAACCTCTTCTCGACATCTTCCATGGCC GCCATCATGTGCTGCGTCTGCACGGAAGGACGACTCGGCGCCGTTGTAGCAGACGAGCTGTGTC GCCGAGAAGTAGAACACCGCATGACCAACGCTCTAGGAACTCCGCCAGAACGAAGAGGAGCCTG AATCTGTTACCACTTGTGATGTCAGCAGGCCACAGCGTGCAGGACTCACCACGTCGGTTTGGGA AGCAGCAGTAGATGAGGAAGAAGGAATATTAAGAAGGAGCAGAGCGAACAGAAATTTGGGGAAG AGGACGGTAAGTCTGTTATTTTCCTTCCTGAGTTCTCATACAGCCTCTTCTTACACTTTTATAC TGACTACTAATGGGATAACAAAATATACGGCCCAAGCCTCTATTACAAGAATCCATCAAGGATT AGACTCTACTCTTCTTACTCAGTAGAACTTGTTGAGCGCAAATGAACGAGGCCTGACATAGGTG CATTTATACAAGAGAAGGACTGGACCCTACATCATGCAGAATTGCAGACTGGAGACCAAATCAC CAAATGGAGACCAGGTGACTTGAAAACTATGGTTAAAAGATGTCTTGTTGGTATCAAGAAATTT TGTTGGTATATGCACCATATGTGCCATTGTGCCCATGCATCTAACATTGTTTCTTTGTCAATTT ATTAGCCCCTATTATCTCAAATTCCTGGTCCCACCCATTGCCACACACCACACGTACAAACTAT GGGTCATAATTCATAAACAGGTCTTTATGTTCGTCAGCATCTAAAGGGTGAACAAAAAATGTTA GCTTATTTAATCTGGTTATAACAGACATTAGATCAGCATTTCCAAAGGTAGCTTGAAATTCAAA GTAAGCTATTTGTGTGTTTATATAACTTGTATAGTTGACATTGCATTGAAAATAATTGGTTCCT TGCTTTATATACACTTGAGTATATGACTAGTCAGTCAACACACAAAATTCTATTAGCCTAAGCT ATCATGATGACACTTATTCAGTACTATGACCTCATGATTATTCAGATTATGCACTAACCTGAAT CTGTTGTATGCCAGTAAGCTCCTTGCAAAAATCAGTCAAAAATTGATGATACGTCGGCCGAACA TATGTTTGGAAGCATTCTTCGAGTTTTCCAGTTGCACTGTTAACCAAGACAGATGGAAACTCGA TGATTTCTTGTGGAAATGGATTGTTCACCTTGTCACAGGTTGCTTCAAAGTCAATAACCACAAA ATACTGAAATTCCTGAAGCTGTGCATCATGGGGGTGACCTTGAGGGAGCATCTTGAATGGAAGA TATTGAACCCTGTTCTCAATAGGGAAACCGTGGTCCCTATTTATCTGATAAAATTGGTTGTCAA AACCATAAGGTAGTGGCTGACGCACGATTTGATAATCTGAATAAATATATGGCCAGGCATAAAA TTCTTGTCGGTAGATGGGCCTGCTAAGGCCTTGGTTTGGAGTCGCCTCCCAGATTTTTTCCGCA GCAACAATATCATTCCTTTTTTCATTATTCTCAGGAAACCCTTCAACACCACCTATCTGCTCTG GAGAGTTATACTGAGAAATATTTGGCTTGAGGCACCCTAGTGGTGCCTCATTATTAACTTGCAT TTCCT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.084263726

Conservation Information
Conserved circRNAs	NA
PMCS	0.084263726

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							45284881-45284871(-)
						
						Potential amino acid sequence
						
							MQVNNEAPLGCLKPNISQYNSPEQIGGVEGFPENNEKRNDIVAAEKIWEATPNQGLSRPIYRQE
FYAWPYIYSDYQIVRQPLPYGFDNQFYQINRDHGFPIENRVQYLPFKMLPQGHPHDAQLQEFQY
FVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCKELTGIQQ
IQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRIRKPPYFNRGNA
S*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	45284881-45284871(-)
Potential amino acid sequence	MQVNNEAPLGCLKPNISQYNSPEQIGGVEGFPENNEKRNDIVAAEKIWEATPNQGLSRPIYRQE FYAWPYIYSDYQIVRQPLPYGFDNQFYQINRDHGFPIENRVQYLPFKMLPQGHPHDAQLQEFQY FVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCKELTGIQQ IQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRIRKPPYFNRGNA S*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d040470_circ_g.3

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