Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d040470_circ_g.2 |
ID in PlantcircBase | zma_circ_001362 |
Alias | circ603 |
Organism | Zea mays |
Position | chr3: 45280591-45284884 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d040470 |
Parent gene annotation |
Exonuclease domain-containing protein 1 |
Parent gene strand | - |
Alternative splicing | Zm00001d040470_circ_g.3 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d040470_T015:2 Zm00001d040470_T017:2 Zm00001d040470_T018:2 Zm00001d040470_T009:2 Zm00001d040470_T016:1 Zm00001d040470_T013:2 Zm00001d040470_T007:2 Zm00001d040470_T012:2 Zm00001d040470_T006:2 Zm00001d040470_T011:2 Zm00001d040470_T004:2 Zm00001d040470_T001:2 Zm00001d040470_T002:2 Zm00001d040470_T014:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.008947368 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chen et al., 2017b |