Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d010523_circ_g.4 |
ID in PlantcircBase | zma_circ_002776 |
Alias | circ2752 |
Organism | Zea mays |
Position | chr8: 119147819-119148308 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d010523 |
Parent gene annotation |
Sucrose-phosphatase 1 |
Parent gene strand | - |
Alternative splicing | Zm00001d010523_circ_g.1 Zm00001d010523_circ_g.2 Zm00001d010523_circ_g.3 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-CA |
Number of exons covered | Zm00001d010523_T005:2 Zm00001d010523_T008:2 Zm00001d010523_T009:2 Zm00001d010523_T011:2 Zm00001d010523_T001:2 Zm00001d010523_T007:2 Zm00001d010523_T012:2 Zm00001d010523_T004:2 Zm00001d010523_T003:2 Zm00001d010523_T002:2 Zm00001d010523_T006:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.159012092 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |