Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d010523_circ_g.1 |
ID in PlantcircBase | zma_circ_002774 |
Alias | circ1300 |
Organism | Zea mays |
Position | chr8: 119146721-119148464 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d010523 |
Parent gene annotation |
Sucrose-phosphatase 1 |
Parent gene strand | - |
Alternative splicing | Zm00001d010523_circ_g.2 Zm00001d010523_circ_g.3 Zm00001d010523_circ_g.4 |
Support reads | 4 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d010523_T001:6 Zm00001d010523_T009:5 Zm00001d010523_T007:5 Zm00001d010523_T011:6 Zm00001d010523_T012:6 Zm00001d010523_T004:6 Zm00001d010523_T008:6 Zm00001d010523_T006:6 Zm00001d010523_T002:5 Zm00001d010523_T003:6 Zm00001d010523_T005:5 |
Conservation Information | |
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Conserved circRNAs | osa_circ_013110 |
PMCS | 0.013713771 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |