Plant Circular RNA Database

Detail information of Os03g0130800_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os03g0130800_circ_g.4
					
						ID in PlantcircBase
						osa_circ_017775
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 1752467-1756575  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os03g0130800						
					
						Parent gene annotation
						
							Bromodomain containing protein. (Os03t0130800-01);Non-protein co
ding transcript. (Os03t0130800-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							ENSRNA049473927_circ_ag.1 Os03g0130500_circ_g.1 Os03g0130500_circ_g.2 Os03g0130500_circ_g.3 Os03g0130500_circ_g.4 Os03g0130500_circ_g.5 Os03g0130800_circ_g.1 Os03g0130800_circ_g.2 Os03g0130800_circ_g.3 Os03g0130800_circ_g.5 Os03g0130800_circ_g.6 Os03g0130800_circ_g.7 Os03g0130950_circ_igg.1 Os03g0130950_circ_igg.2 Os03g0131100_circ_g.1 Os03g0131100_circ_g.2 Os03g0131200_circ_g.1 Os03g0131200_circ_g.2 Os03g0131200_circ_g.3 Os03g0131200_circ_g.4 Os03g0131200_circ_g.5 Os03g0131200_circ_g.6 Os03g0131200_circ_g.7 Os03g0131200_circ_g.8 Os03g0131200_circ_g.9 Os03g0131200_circ_g.10 Os03g0131200_circ_g.11 Os03g0131333_circ_g.1 Os03g0131333_circ_g.2 Os03g0131500_circ_g.1 Os03g0132000_circ_g.1 Os03g0132200_circ_g.1 Os03g0132200_circ_g.2 Os03g0132800_circ_g.1 Os03g0133000_circ_g.1 Os03g0133300_circ_g.1 Os03g0133300_circ_g.2 Os03g0133300_circ_g.3 Os03g0133300_circ_g.4 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0130800-01:7

General Information
CircRNA Name	Os03g0130800_circ_g.4
ID in PlantcircBase	osa_circ_017775
Alias	NA
Organism	Oryza sativa
Position	chr3: 1752467-1756575 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os03g0130800
Parent gene annotation	Bromodomain containing protein. (Os03t0130800-01);Non-protein co ding transcript. (Os03t0130800-02)
Parent gene strand	+
Alternative splicing	ENSRNA049473927_circ_ag.1 Os03g0130500_circ_g.1 Os03g0130500_circ_g.2 Os03g0130500_circ_g.3 Os03g0130500_circ_g.4 Os03g0130500_circ_g.5 Os03g0130800_circ_g.1 Os03g0130800_circ_g.2 Os03g0130800_circ_g.3 Os03g0130800_circ_g.5 Os03g0130800_circ_g.6 Os03g0130800_circ_g.7 Os03g0130950_circ_igg.1 Os03g0130950_circ_igg.2 Os03g0131100_circ_g.1 Os03g0131100_circ_g.2 Os03g0131200_circ_g.1 Os03g0131200_circ_g.2 Os03g0131200_circ_g.3 Os03g0131200_circ_g.4 Os03g0131200_circ_g.5 Os03g0131200_circ_g.6 Os03g0131200_circ_g.7 Os03g0131200_circ_g.8 Os03g0131200_circ_g.9 Os03g0131200_circ_g.10 Os03g0131200_circ_g.11 Os03g0131333_circ_g.1 Os03g0131333_circ_g.2 Os03g0131500_circ_g.1 Os03g0132000_circ_g.1 Os03g0132200_circ_g.1 Os03g0132200_circ_g.2 Os03g0132800_circ_g.1 Os03g0133000_circ_g.1 Os03g0133300_circ_g.1 Os03g0133300_circ_g.2 Os03g0133300_circ_g.3 Os03g0133300_circ_g.4
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0130800-01:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TATTTCAGATGATGAGCGTCGTAGTACATACGATCAGCAATACTTCCATAGTAGTCCTCTGTTT
TCTGCCCTTGGTGGTGAGAGGAAAGTACTTGTGCCGgatgatgaggcgcccgcggccgccgtgg
tggtgaaggtggaggtggaggagaagaagaagaaggtctcgtcgaaagcgaccgggaaaggtga
ggcttgga

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GATGATGAGGCGCCCGCGGCCGCCGTGGTGGTGAAGGTGGAGGTGGAGGAGAAGAAGAAGAAGG
TCTCGTCGAAAGCGACCGGGAAAGGTGAGGCTTGGAGGGAAGCCAAGCATTAGTGTTGAAGTGG
TTAAAGAATTTGAAATTTTCTCGGGTTAACTCCTCCTTGCGCTTGTGGGAGCAGGGGACGCTGC
GTCGGATGGCGGGCCCACTACGGGGACTCCCCTCCCGGACAAAAAGTTGCTTCTCTTCATCCTC
GACAGGCTCCAGAAGTGAGTGGCCCGGCCCCATCCTGATGTAGTTCTCTTCTCCCCCCAATAAG
AGCTTGCCTCTGATTGCTTCAGCTATGTATGTGTGTATCTCTTCTTTGTACTGCTCCCAGGAAG
GACACCTATGGAGTTTTCTCGGAGCCCGTCGACCATGAGGAGGTGAGCAATTCAGTTCTTGGTC
TGCTGTGTATTTGTGTTCTGAAGTTTGCAGTGATGATGTTGACAACTGTTTTGTGTTTTGTGTA
TCTGTTGTTGTGCGTGCTTGCATGCAGCTTCCAGATTACCATGAGATTATCGAGCATCCTATGG
ACTTCTCGACGATCCGCGAGAAGCTGTTGAATGACTCGTATACCACCCTAGAGCAGTTTGAGGT
ATGATGCCTGTAGTTTGAGTTGCTGTCTCCTTGCGTGTTGTCTGTTTTATTGGCTTTTCATTCA
CTGACACTACAGATGTTTGCTTCTGTCTACTGTTCTGTACTTCACGTTTTTTCTATTGCTTTAT
ATCTGCTAAGGCTAGTTCTGTTATTTTCCTGTAAAATCCTAGGTCTCGTGTCTAGCTTCACATG
TCTTCTCTCTCTTTTGTTTGTACCACAAGTGTCTATGCAGTTTTAAGTCAAACTAGTTTATCTT
CATAATTCACTTTCAATGAATTTGTTGATACTGGTTGTTGGTATTGTTTATGAAGCCACTGAAG
TGTTTTCTGCATTTTGGTAACAATGTCAAGGAATTCCTGATTTGAGAAAGTACATTTGGTATAT
CCTTGTTCTTACACAGGGTCAAATTATTGTTTTTTTTATGAGTTAATGCCTTCATTAATGGAAA
GTGCTCTCTGGATTGGCATGTAGAGGTCGCATGTGCTACTTTTTAATGATCATCGTGGACTGTA
GCTAAGAGAAAGCCCAGTAAACTTCATAATGATTCCTCCTATTTTAGCTCCAAAGTTGTATCCA
TTCAATAACTACCAGTTACTTTATGCTCACTATTTATAGTCTTTCCCTGTTGATTTGCCCAACT
TAGTGGTGGAAGCTTCGCATTCTTCTCGGCAGGCTAGCACATGGTTCATTTGTGTGCTAACTCA
GGCTAAGAGCAATCCCAAATTTGATGGTTCTGTATACTCAAATTGGCTGCTTAAACTAAAAATA
TCAATATCTCAAAACACTGGTAAACCATAGTCCATATTGAAACTGTACTTCTTGGATAGATTAT
AACTCTATCTATCCCTTCAGAAGTGAGATTCAAGTTCTGCACTGTATGGTGTTTGAGTCCAATT
TTCAAGTTCTGCATCAACTCAAATGATCTGGGGATGTTTGTAAATTTGTTTCTTTCTAGTAACG
GATCTTCATGTGAAGTGGACTTCAAATAGCCTTCATGTTTTCTATTCTGGCACAAATGTTCTCC
AGCCACTATTATATTTTCTTCATAATGTCTATATTTTGTTTTCAGCCCTATTTTTCTCTTAAAA
GTTCTGCGCTTTTCTCTTGATAAGCGTTTCGGAGGAGAGAGTTTGTCATTTCAGGCCATTAAAA
AACCTTTTAGCGACACAGATATGGTTGCTTTATTATTTTGTTTTTGGGGTTTATCCGTGTTTAT
ATACCACTGAGTTCTATCAAAGGTCCATAATGTGCTGCTAACGCCAACTTATTGATCTGTCATT
GTAACGACTCGGTGGGATATTTTGTTCTTCCATTTTGTACAATGTATTGAGTTTTGAAAAATTG
CTGTGTAGCTTTGCACAGCAACATTGTTAAGAGTTTTCCACTTGTCCTGCATATGTTTGCTGTA
TGGATTTTTTTCTTCTAAAATTAGTAAATCATGAAGCAAATCATAATGGAGTAAGAGTAACACT
TTGCTTAAGTAGTTTGGATCTTCGCTTAAAATCTCTTTTTTTTTTTGGCTTTACTAGTATGAAC
CTTCTCTTAATATCTAATGTTTTTTTAATGATTGTGCAGAATGATGTGTTTCTACTTACATCAA
ATGCCATGTCCTACAATTCAGACGACACAGTCTACTATCGGCAGGTATCTATTTTACTAATGCT
GTAATGCATGTGCCTTTTGCAACAGGACTATGTGATCCATTTTGTAGATATACCGCCGTACTGT
TTGCACGCATTCAATGCTTGGTTTATATAGGTTATTCATAACCCTTGCAAATTTCTTATGCTTG
GTGCAGTTTCTTTTCGTGAGACTTCTATAAATTTGTGCACCTGTTACACAAATGGCACATTCTT
CTTTTTGTTCCTGTTGTGCTTTTGTAGTTGGTGTTTTTATTTCGTGTGAATATCATTGTTACAC
TAAGGCCAACACAAGTTTTTTTTTAATCAACTTCCTTTGGTATTTTTATTTTGATACTCCTTTG
GACTCTTAGAACATTGGAAGTCCATTGGATTTGTGTTATACTGATAATTTCTACAAAGCCAAGA
CACCTAGGTCGCTATCTTCCACAGTATGTTTCCCCAGCTGGTAGGGATGAAAACGGAGCGGATA
GTTTCCGTCCGCTCAGGACAAAAACGGATACGGATACCTTTCGGATCGGATAATTCTCGGATAG
TTCGGATACGGATACGAATACGGATATTTTCTCCCGGATACGAATACGAATATGGTACCAGGGT
TTCCGTCGGATACGGATAATAATTCGGATATCCGGTGAACGGTGCTATTCGGATATCCGCAGGA
CCCATGAGACATACCCCATTTCTTTCTAACTCTATAACCTTCAATATACCTTTATAGATTTTAA
TAGTAGTTTATCTCTTAACACTAGTCACTATTAATATTATTTAAATTTTAAAAAATATTTATAA
ATTATACCTCATTTTATATAAAATGAGCTAATTATATATGTTGATATTTGTTTCCATTAGAAGT
TGAGTTGGTTTTCGTGTTCCGAGAAAAAATTGTTTCCGTATTCGTGTCCGATCATATTTGATTC
TTATTCGTATTCGAGATAATCCGTATTTGTTTCCGTATTCGAGCTATCCGTATTCGTTTTCGTA
TCCGGTAAAAAATATGAAAACGAATATGGTATGAGCATTATCCGTCCGTATCCGCTCCGTTTTC
ATCCCTACCAGCTGGAATTATACTGCAGCACAAAAGAAATCGATACACTTGCATAAATACGAGG
CATTGTATGTAGGATAAATTCCTTCTCTTATCTGGAAACTGTTGAAATCCATTGACGTGATCCT
TTCTGTTATCTTTTGTCTTAAGACTATTTTATTTTGCAAGTTAGCCTATCTTTGTGGTCTTTTT
GGCTTCCAATTTCCTGAGATGTTCATTTATCTACTTAGGCACGATCTATTGAAGCTCTGGCCAA
AAAGGATTTCGAGAACCTGAGGCAAGCTAGTGAGCCTGAAGAAGAACAACAACCCAAGACTGTA
CCCAGAAGAGGCAGACCACCAAAATATGCAAAGAAAATTGAGAAGACTGAAAATGATGTTTCAC
CAGATTTATCCAATGCAAAAACAAAATCTGCAGACCATGCTGAAACAATTAGAAAAAGGTTGAC
TGGGGACAGAACTCGAAATGCAAATATCACAACAAGAGACTCACCCTTTCTTCAACATAATACA
CCTGGTTCTTTTGCTGGTAAAAGAACAGATAGATTTGGTGATTATTCAGGTTTGTTTTTATTGC
TAATTGCTCGTATCTCTACAGTGCTGTACTTATGGAGCTTGAGCATGGCTTGATATCGTGGTAT
CTTTCAGGGCCTTCGAAGTACGGAAAGAAGACCACCCCGACTATTTCAGATGATGAGCGTCGTA
GTACATACGATCAGCAATACTTCCATAGTAGTCCTCTGTTTTCTGCCCTTGGTGGTGAGAGGAA
AGTACTTGTGCCG
						
					

			
		

Sequences
Splice junction sequence	TATTTCAGATGATGAGCGTCGTAGTACATACGATCAGCAATACTTCCATAGTAGTCCTCTGTTT TCTGCCCTTGGTGGTGAGAGGAAAGTACTTGTGCCGgatgatgaggcgcccgcggccgccgtgg tggtgaaggtggaggtggaggagaagaagaagaaggtctcgtcgaaagcgaccgggaaaggtga ggcttgga
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GATGATGAGGCGCCCGCGGCCGCCGTGGTGGTGAAGGTGGAGGTGGAGGAGAAGAAGAAGAAGG TCTCGTCGAAAGCGACCGGGAAAGGTGAGGCTTGGAGGGAAGCCAAGCATTAGTGTTGAAGTGG TTAAAGAATTTGAAATTTTCTCGGGTTAACTCCTCCTTGCGCTTGTGGGAGCAGGGGACGCTGC GTCGGATGGCGGGCCCACTACGGGGACTCCCCTCCCGGACAAAAAGTTGCTTCTCTTCATCCTC GACAGGCTCCAGAAGTGAGTGGCCCGGCCCCATCCTGATGTAGTTCTCTTCTCCCCCCAATAAG AGCTTGCCTCTGATTGCTTCAGCTATGTATGTGTGTATCTCTTCTTTGTACTGCTCCCAGGAAG GACACCTATGGAGTTTTCTCGGAGCCCGTCGACCATGAGGAGGTGAGCAATTCAGTTCTTGGTC TGCTGTGTATTTGTGTTCTGAAGTTTGCAGTGATGATGTTGACAACTGTTTTGTGTTTTGTGTA TCTGTTGTTGTGCGTGCTTGCATGCAGCTTCCAGATTACCATGAGATTATCGAGCATCCTATGG ACTTCTCGACGATCCGCGAGAAGCTGTTGAATGACTCGTATACCACCCTAGAGCAGTTTGAGGT ATGATGCCTGTAGTTTGAGTTGCTGTCTCCTTGCGTGTTGTCTGTTTTATTGGCTTTTCATTCA CTGACACTACAGATGTTTGCTTCTGTCTACTGTTCTGTACTTCACGTTTTTTCTATTGCTTTAT ATCTGCTAAGGCTAGTTCTGTTATTTTCCTGTAAAATCCTAGGTCTCGTGTCTAGCTTCACATG TCTTCTCTCTCTTTTGTTTGTACCACAAGTGTCTATGCAGTTTTAAGTCAAACTAGTTTATCTT CATAATTCACTTTCAATGAATTTGTTGATACTGGTTGTTGGTATTGTTTATGAAGCCACTGAAG TGTTTTCTGCATTTTGGTAACAATGTCAAGGAATTCCTGATTTGAGAAAGTACATTTGGTATAT CCTTGTTCTTACACAGGGTCAAATTATTGTTTTTTTTATGAGTTAATGCCTTCATTAATGGAAA GTGCTCTCTGGATTGGCATGTAGAGGTCGCATGTGCTACTTTTTAATGATCATCGTGGACTGTA GCTAAGAGAAAGCCCAGTAAACTTCATAATGATTCCTCCTATTTTAGCTCCAAAGTTGTATCCA TTCAATAACTACCAGTTACTTTATGCTCACTATTTATAGTCTTTCCCTGTTGATTTGCCCAACT TAGTGGTGGAAGCTTCGCATTCTTCTCGGCAGGCTAGCACATGGTTCATTTGTGTGCTAACTCA GGCTAAGAGCAATCCCAAATTTGATGGTTCTGTATACTCAAATTGGCTGCTTAAACTAAAAATA TCAATATCTCAAAACACTGGTAAACCATAGTCCATATTGAAACTGTACTTCTTGGATAGATTAT AACTCTATCTATCCCTTCAGAAGTGAGATTCAAGTTCTGCACTGTATGGTGTTTGAGTCCAATT TTCAAGTTCTGCATCAACTCAAATGATCTGGGGATGTTTGTAAATTTGTTTCTTTCTAGTAACG GATCTTCATGTGAAGTGGACTTCAAATAGCCTTCATGTTTTCTATTCTGGCACAAATGTTCTCC AGCCACTATTATATTTTCTTCATAATGTCTATATTTTGTTTTCAGCCCTATTTTTCTCTTAAAA GTTCTGCGCTTTTCTCTTGATAAGCGTTTCGGAGGAGAGAGTTTGTCATTTCAGGCCATTAAAA AACCTTTTAGCGACACAGATATGGTTGCTTTATTATTTTGTTTTTGGGGTTTATCCGTGTTTAT ATACCACTGAGTTCTATCAAAGGTCCATAATGTGCTGCTAACGCCAACTTATTGATCTGTCATT GTAACGACTCGGTGGGATATTTTGTTCTTCCATTTTGTACAATGTATTGAGTTTTGAAAAATTG CTGTGTAGCTTTGCACAGCAACATTGTTAAGAGTTTTCCACTTGTCCTGCATATGTTTGCTGTA TGGATTTTTTTCTTCTAAAATTAGTAAATCATGAAGCAAATCATAATGGAGTAAGAGTAACACT TTGCTTAAGTAGTTTGGATCTTCGCTTAAAATCTCTTTTTTTTTTTGGCTTTACTAGTATGAAC CTTCTCTTAATATCTAATGTTTTTTTAATGATTGTGCAGAATGATGTGTTTCTACTTACATCAA ATGCCATGTCCTACAATTCAGACGACACAGTCTACTATCGGCAGGTATCTATTTTACTAATGCT GTAATGCATGTGCCTTTTGCAACAGGACTATGTGATCCATTTTGTAGATATACCGCCGTACTGT TTGCACGCATTCAATGCTTGGTTTATATAGGTTATTCATAACCCTTGCAAATTTCTTATGCTTG GTGCAGTTTCTTTTCGTGAGACTTCTATAAATTTGTGCACCTGTTACACAAATGGCACATTCTT CTTTTTGTTCCTGTTGTGCTTTTGTAGTTGGTGTTTTTATTTCGTGTGAATATCATTGTTACAC TAAGGCCAACACAAGTTTTTTTTTAATCAACTTCCTTTGGTATTTTTATTTTGATACTCCTTTG GACTCTTAGAACATTGGAAGTCCATTGGATTTGTGTTATACTGATAATTTCTACAAAGCCAAGA CACCTAGGTCGCTATCTTCCACAGTATGTTTCCCCAGCTGGTAGGGATGAAAACGGAGCGGATA GTTTCCGTCCGCTCAGGACAAAAACGGATACGGATACCTTTCGGATCGGATAATTCTCGGATAG TTCGGATACGGATACGAATACGGATATTTTCTCCCGGATACGAATACGAATATGGTACCAGGGT TTCCGTCGGATACGGATAATAATTCGGATATCCGGTGAACGGTGCTATTCGGATATCCGCAGGA CCCATGAGACATACCCCATTTCTTTCTAACTCTATAACCTTCAATATACCTTTATAGATTTTAA TAGTAGTTTATCTCTTAACACTAGTCACTATTAATATTATTTAAATTTTAAAAAATATTTATAA ATTATACCTCATTTTATATAAAATGAGCTAATTATATATGTTGATATTTGTTTCCATTAGAAGT TGAGTTGGTTTTCGTGTTCCGAGAAAAAATTGTTTCCGTATTCGTGTCCGATCATATTTGATTC TTATTCGTATTCGAGATAATCCGTATTTGTTTCCGTATTCGAGCTATCCGTATTCGTTTTCGTA TCCGGTAAAAAATATGAAAACGAATATGGTATGAGCATTATCCGTCCGTATCCGCTCCGTTTTC ATCCCTACCAGCTGGAATTATACTGCAGCACAAAAGAAATCGATACACTTGCATAAATACGAGG CATTGTATGTAGGATAAATTCCTTCTCTTATCTGGAAACTGTTGAAATCCATTGACGTGATCCT TTCTGTTATCTTTTGTCTTAAGACTATTTTATTTTGCAAGTTAGCCTATCTTTGTGGTCTTTTT GGCTTCCAATTTCCTGAGATGTTCATTTATCTACTTAGGCACGATCTATTGAAGCTCTGGCCAA AAAGGATTTCGAGAACCTGAGGCAAGCTAGTGAGCCTGAAGAAGAACAACAACCCAAGACTGTA CCCAGAAGAGGCAGACCACCAAAATATGCAAAGAAAATTGAGAAGACTGAAAATGATGTTTCAC CAGATTTATCCAATGCAAAAACAAAATCTGCAGACCATGCTGAAACAATTAGAAAAAGGTTGAC TGGGGACAGAACTCGAAATGCAAATATCACAACAAGAGACTCACCCTTTCTTCAACATAATACA CCTGGTTCTTTTGCTGGTAAAAGAACAGATAGATTTGGTGATTATTCAGGTTTGTTTTTATTGC TAATTGCTCGTATCTCTACAGTGCTGTACTTATGGAGCTTGAGCATGGCTTGATATCGTGGTAT CTTTCAGGGCCTTCGAAGTACGGAAAGAAGACCACCCCGACTATTTCAGATGATGAGCGTCGTA GTACATACGATCAGCAATACTTCCATAGTAGTCCTCTGTTTTCTGCCCTTGGTGGTGAGAGGAA AGTACTTGTGCCG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.113335686

Conservation Information
Conserved circRNAs	NA
PMCS	0.113335686

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							1753040-1756572(+)
1756261-1752497(+)
1753037-1756482(-)
1752720-1756511(-)
						
					

						Potential amino acid sequence
						
							MDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTVYYRQARSIEALAKKDFENLRQAS
EPEEEQQPKTVPRRGRPPKYAKKIEKTENDVSPDLSNAKTKSADHAETIRKRLTGDRTRNANIT
TRDSPFLQHNTPGSFAGKRTDRFGDYSGPSKYGKKTTPTISDDERRSTYDQQYFHSSPLFSALG
GERKVLVPDDEAPAAAVVVKVEVEEKKKKVSSKATGKGDAASDGGPTTGTPLPDKKLLLFILDR
LQKKDTYGVFSEPVDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSY
NSDDTVYYRQARSIEALAKKDFENLRQASEPEEEQQPKTVPRRGRPPKYAKKIEKTENDVSPDL
SNAKTKSADHAETIRKRLTGDRTRNANITTRDSPFLQHNTPGSFAGKRTDRFGDYSGPSKYGKK
TTPTISDDERRSTYDQQYFHSSPLFSALGGERKVLVPDDEAPAAAVVVKVEVEEKKKKVSSKAT
GKGDAASDGGPTTGTPLPDKKLLLFILDRLQKKDTYGVFSEPVDHEELPDYHEIIEHPMDFSTI
REKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTVYYRQARSIEALAKKDFENLRQASEPEEEQ
QPKTVPRRGRPPKYAKKIEKTENDVSPDLSNAKTKSADHAETIRKRLTGDRTRNANITTRDSPF
LQHNTPGSFAGKRTDRFGDYSGPSKYGKKTTPTISDDERRSTYDQQYFHSSPLFSALGGERKVL
VPDDEAPAAAVVVKVEVEEKKKKVSSKATGKGDAASDGGPTTGTPLPDKKLLLFILDRLQKKDT
YGVFSEPVDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTV
YYRQARSIEALAKKDFENLRQASEPEEEQQPKTVPRRGRPPKYAKKIEKTENDVSPDLSNAKTK
SADHAETIRKRLTGDRTRNANITTRDSPFLQHNTPGSFAGKRTDRFGDYSGPSKYGKKTTPTIS
DDERRSTYDQQYFHSSPLFSALGGERKVLVP(+)
MQISQQETHPFFNIIHLVLLLVKEQIDLVIIQGLRSTERRPPRLFQMMSVVVHTISNTSIVVLC
FLPLVVRGKYLCRMMRRPRPPWW*(+)
MLDNLMVIWKLLMVDGLRENSIGVLLLEPVEDEEKQLFVREGSPRSGPAIRRSVPFPGRFRRDL
LLLLLHLHLHHHGGRGRLIIRHKYFPLTTKGRKQRTTMEVLLIVCTTTLII*(-)
MKRSNFLSGRGVPVVGPPSDAASPFPVAFDETFFFFSSTSTFTTTAAAGASSSGTSTFLSPPRA
ENRGLLWKYC*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	1753040-1756572(+) 1756261-1752497(+) 1753037-1756482(-) 1752720-1756511(-)
Potential amino acid sequence	MDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTVYYRQARSIEALAKKDFENLRQAS EPEEEQQPKTVPRRGRPPKYAKKIEKTENDVSPDLSNAKTKSADHAETIRKRLTGDRTRNANIT TRDSPFLQHNTPGSFAGKRTDRFGDYSGPSKYGKKTTPTISDDERRSTYDQQYFHSSPLFSALG GERKVLVPDDEAPAAAVVVKVEVEEKKKKVSSKATGKGDAASDGGPTTGTPLPDKKLLLFILDR LQKKDTYGVFSEPVDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSY NSDDTVYYRQARSIEALAKKDFENLRQASEPEEEQQPKTVPRRGRPPKYAKKIEKTENDVSPDL SNAKTKSADHAETIRKRLTGDRTRNANITTRDSPFLQHNTPGSFAGKRTDRFGDYSGPSKYGKK TTPTISDDERRSTYDQQYFHSSPLFSALGGERKVLVPDDEAPAAAVVVKVEVEEKKKKVSSKAT GKGDAASDGGPTTGTPLPDKKLLLFILDRLQKKDTYGVFSEPVDHEELPDYHEIIEHPMDFSTI REKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTVYYRQARSIEALAKKDFENLRQASEPEEEQ QPKTVPRRGRPPKYAKKIEKTENDVSPDLSNAKTKSADHAETIRKRLTGDRTRNANITTRDSPF LQHNTPGSFAGKRTDRFGDYSGPSKYGKKTTPTISDDERRSTYDQQYFHSSPLFSALGGERKVL VPDDEAPAAAVVVKVEVEEKKKKVSSKATGKGDAASDGGPTTGTPLPDKKLLLFILDRLQKKDT YGVFSEPVDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFLLTSNAMSYNSDDTV YYRQARSIEALAKKDFENLRQASEPEEEQQPKTVPRRGRPPKYAKKIEKTENDVSPDLSNAKTK SADHAETIRKRLTGDRTRNANITTRDSPFLQHNTPGSFAGKRTDRFGDYSGPSKYGKKTTPTIS DDERRSTYDQQYFHSSPLFSALGGERKVLVP(+) MQISQQETHPFFNIIHLVLLLVKEQIDLVIIQGLRSTERRPPRLFQMMSVVVHTISNTSIVVLC FLPLVVRGKYLCRMMRRPRPPWW(+) MLDNLMVIWKLLMVDGLRENSIGVLLLEPVEDEEKQLFVREGSPRSGPAIRRSVPFPGRFRRDL LLLLLHLHLHHHGGRGRLIIRHKYFPLTTKGRKQRTTMEVLLIVCTTTLII(-) MKRSNFLSGRGVPVVGPPSDAASPFPVAFDETFFFFSSTSTFTTTAAAGASSSGTSTFLSPPRA ENRGLLWKYC*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os03g0130800_circ_g.4

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