Plant Circular RNA Database

Detail information of Os03g0182400_circ_g.9

			
						 General Information
					
						CircRNA Name
						Os03g0182400_circ_g.9
					
						ID in PlantcircBase
						osa_circ_018229
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 4330248-4333506  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						PcircRNA_finder
					
						Parent gene
						
							Os03g0182400						
					
						Parent gene annotation
						
							Similar to SAC domain protein 1 (FIG4-like protein AtFIG4). (Os0
3t0182400-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os03g0182400_circ_g.1 Os03g0182400_circ_g.2 Os03g0182400_circ_g.3 Os03g0182400_circ_g.4 Os03g0182400_circ_g.5 Os03g0182400_circ_g.6 Os03g0182400_circ_g.7 Os03g0182400_circ_g.8 Os03g0182400_circ_g.10 Os03g0182400_circ_g.11 Os03g0182400_circ_g.12 Os03g0182400_circ_g.13 Os03g0182400_circ_g.14 Os03g0182400_circ_g.15 Os03g0182400_circ_g.16 Os03g0182400_circ_g.17 Os03g0182400_circ_g.18 Os03g0182400_circ_g.19 Os03g0182400_circ_g.20 Os03g0182400_circ_g.21 						
					
						Support reads
						12
					
						Tissues
						seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0182400-01:9

General Information
CircRNA Name	Os03g0182400_circ_g.9
ID in PlantcircBase	osa_circ_018229
Alias	NA
Organism	Oryza sativa
Position	chr3: 4330248-4333506 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	PcircRNA_finder
Parent gene	Os03g0182400
Parent gene annotation	Similar to SAC domain protein 1 (FIG4-like protein AtFIG4). (Os0 3t0182400-01)
Parent gene strand	+
Alternative splicing	Os03g0182400_circ_g.1 Os03g0182400_circ_g.2 Os03g0182400_circ_g.3 Os03g0182400_circ_g.4 Os03g0182400_circ_g.5 Os03g0182400_circ_g.6 Os03g0182400_circ_g.7 Os03g0182400_circ_g.8 Os03g0182400_circ_g.10 Os03g0182400_circ_g.11 Os03g0182400_circ_g.12 Os03g0182400_circ_g.13 Os03g0182400_circ_g.14 Os03g0182400_circ_g.15 Os03g0182400_circ_g.16 Os03g0182400_circ_g.17 Os03g0182400_circ_g.18 Os03g0182400_circ_g.19 Os03g0182400_circ_g.20 Os03g0182400_circ_g.21
Support reads	12
Tissues	seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0182400-01:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATTTCCAACCACAAGAAGGAAAACCTGCGCTTTGGAAATTGGACTCAGATCAGCATTACAACAT
TGGCAGGCAAGGAACTTTAACTGAAGAAACTGGGAGatataaacggctcctttgctcggtcgat
ctctcgaaagacttcttcttcagctactcttacaatatcatgcgcagccttcagaagaacataa
ctgacaag

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1377
Transcript exons: 4330248-4330470,4331104-4331180,4331304-4331491,4331576-
4331670,4331887-4332020,4332127-4332237,4332517-4332832,
4333132-4333253,4333396-4333506
ATATAAACGGCTCCTTTGCTCGGTCGATCTCTCGAAAGACTTCTTCTTCAGCTACTCTTACAAT
ATCATGCGCAGCCTTCAGAAGAACATAACTGACAAGAATACTGGGCAAGTTGTTTATGAGACAA
TGTTTGTTTGGAACGAGTTTCTGTCTCGAGCTATCCGGAACCATCTCAAGAATACAACGTGGAC
TGTTGCCTTAATCCATGGATTTTTTAAACAGTCAAAGCTCTCAGTAGCTGGGAAGGAATTCTGG
TTGACACTTATAGCAAGGCGCTCACGTCATTTTGCTGGAACCAGATTCTTGAAAAGAGGTGTTA
ATGAAAAGGGTAGGGTTGCCAATGATGTTGAGACTGAACAAATTGTTTTTGAGGACACACCAGA
TGAAATACCACATCAGATATCATCTGTTGTACAACATAGAGGATCCATACCTCTTATATGGTTT
CAGGAAACTTCAAGACTCAACATTAGGCCAGATATCATACTGAAACCGGATGTAGACTACAAGA
CAACTCGCCTTCATTTTGAGAACCTTGCACTTAGATATGGGAACCCAATAATTATCTTAAACTT
GATCAAGACTCGTGAGAAGAAACCTCGTGAATCTTTGCTCCGTGCAGAATTCGCAAAGGCTATA
CATTATATTAACAAGGGGCTGCCAGATGACAAACGTCTAAAGTTTTTACACATGGATCTGAGTA
AGCTTTCTAGAAGGAAAGGTACCAATGTGCTTTCGCTGTTGAACAAGGTAGCATCAGATGTGTT
GGATCTAACTGACTTCCTCCACTGTGAGATAACTACATCAAAGTATGAGGATGCATCAAGTGGA
CAAGGAGCTGTTGCCAACTCAGGTGACATCGAAAACATCCAGGATCAAAATTTATGTGCAACTA
AGCTAGTACCTCTTTTACTGCAAAAGGGTGTCCTCAGGACTAACTGCATAGACTGCTTGGACCG
CACAAATGTTGCACAGTTTGCGTATGGCTTAGCTGCTTTAGGGCGTCAACTTCATGTGCTCCAG
CTCAATGAAACCCCTACAATTGAATTGCATGCTCCTTTGGCCGATGATCTTATGGATTTCTATG
AACGGATGGGTGATACGCTAGCTATTCAATATGGTGGCTCTGCTGCTCACAACAAGATCTTCTG
TGAGCAAAGAGGCCAATGGAAGGCAGCAACACAATCTCAGGAGTTCCTCCGGACCCTTCAGCGC
TACTACAGTAATGCCTACACTGATCCTGAGAAGCAGGATTCTATAAATGTGTTCTTGGGTCATT
TCCAACCACAAGAAGGAAAACCTGCGCTTTGGAAATTGGACTCAGATCAGCATTACAACATTGG
CAGGCAAGGAACTTTAACTGAAGAAACTGGGAG
						
					

						Genomic sequence
						
							ATATAAACGGCTCCTTTGCTCGGTCGATCTCTCGAAAGACTTCTTCTTCAGCTACTCTTACAAT
ATCATGCGCAGCCTTCAGAAGAACATAACTGACAAGAATACTGGGCAAGTTGTTTATGAGACAA
TGTTTGTTTGGAACGAGTTTCTGTCTCGAGCTATCCGGAACCATCTCAAGAATACAACGTGGAC
TGTTGCCTTAATCCATGGATTTTTTAAACAGGTATTCTGCTGCAACATTCTAAGTCTCCGATAC
TGCATTTGATGCGATCCATTCTTTTCATCTCTAATTGATGAGCTTATGCATATCCAGCACTGTC
TATTCATCAACGAAGACCACAAGTAGGGATACTGCTAACTCAATGCCATCCCACTAACTTTTGT
GTTTTACTCCACAATGTGTGACCTGACATGTAGTGAAAGCTCGAAATAAAGGGTTTGCAAAGGC
ATGGCTTTGTATAACCTGCTGACATTTATCAGTTTGAGCTTCTTGAGGCTTTCCCGAGTCGAAA
ATTTTGCTCGTAAGTCTCAGCAGACTGTTAATGCTTTTCCTAAGTTGTTAAATTCCCCTTTGTG
CAGTCTTAGCAAACCAATGCTTAGATGTGAAATTACAGCGCTATTTATACTTATCTGTAATGTT
TATTAAACGGTAAGCGTTGTGCCGTTGAGGTTCTTTGGTCCTGGTTCAAGACCTTTGAATTAGG
ACATGTATGATTGGCAGTTCTAAATGTTTCTGATAAATAGGAACTTCTTATTGCTACTCTATTT
GCATTTTCATTATGTAAGTACTGTGTTTCATACTTTCATCTGTCAAGTATTATACACAGAGCCA
TGCTAAACATATTTTGTTGCACAGTCAAAGCTCTCAGTAGCTGGGAAGGAATTCTGGTTGACAC
TTATAGCAAGGCGCTCACGTCATTTTGCTGGAACCAGGTTTGCATTACAATCCTTTGGGTTTAG
CACCCTAATTTATGTTGAAAAGAATGGAGCCTAAACAATGTAATCTATGTCGCCTGATCTTACA
ATGTTAATTTTGCATGTCATTTTCAAATACAGATTCTTGAAAAGAGGTGTTAATGAAAAGGGTA
GGGTTGCCAATGATGTTGAGACTGAACAAATTGTTTTTGAGGACACACCAGATGAAATACCACA
TCAGATATCATCTGTTGTACAACATAGAGGATCCATACCTCTTATATGGTTTCAGGAAACTTCA
AGACTCAACATTAGGCCAGATATCATACGTAAGTTCTAGACTGTCAGTCTGTCATGCATTTGCC
ATCTGTAGACTGTCTTCTCTAATACTCCAATCACCTTGCTACCTGCAGTGAAACCGGATGTAGA
CTACAAGACAACTCGCCTTCATTTTGAGAACCTTGCACTTAGATATGGGAACCCAATAATTATC
TTAAACTTGATCAAGGTGAGAATAAGTGTGGAATACAAATTTGGTTTATTCTCTGATGGATTTT
TTTTTGATAGTTTACATGTGAATCACTACTGACTTATATATCTATCAATTTAATTGCAATATTT
TTTTTCTGAAAAGGAAATTTAATTGCCATATTGACGACCTTATGTTCTTTGTTATCAATCTGGA
GTTCTCATATCCATTTCGGGTCCCTTGTATTTTTTTCAGACTCGTGAGAAGAAACCTCGTGAAT
CTTTGCTCCGTGCAGAATTCGCAAAGGCTATACATTATATTAACAAGGGGCTGCCAGATGACAA
ACGTCTAAAGTTTTTACACATGGATCTGAGTAAGCTTTCTAGAAGGTAGTGTATCGTACTCCAA
GGAAATCTTATATCCAAGCCATTAGGATTCAAGCTTGTAATTACTTGTAAATTGCCTTCGATGT
TAAGTACTAAGTGCTATTTACAGGAAAGGTACCAATGTGCTTTCGCTGTTGAACAAGGTAGCAT
CAGATGTGTTGGATCTAACTGACTTCCTCCACTGTGAGATAACTACATCAAAGTATGAGGATGC
ATCAAGGTAACATTTGGCCTACTTAAGAGTTATAAGAGTTATATTAAAATTTTGCCTGGCCACC
AGAAACTACCTGATGTTGTTTGTCAAAAAATGTTCCTTCATGATGTTACCCTGTAACATATTCA
TTCTTTGGATTAGTCAAAGCTGTGCCTTGGAGAACAGTAGAACACACAAATAAGGCAGCTTTTG
GAACAATTGGGAGTAGCTGCTCTCCTATTTGGTCTTATCTTATGAGCTCACATAACAGTACTAA
TGCATTTTTTTTCTTTTTAAATGCATCAGTGGACAAGGAGCTGTTGCCAACTCAGGTGACATCG
AAAACATCCAGGATCAAAATTTATGTGCAACTAAGCTAGTACCTCTTTTACTGCAAAAGGGTGT
CCTCAGGACTAACTGCATAGACTGCTTGGACCGCACAAATGTTGCACAGTTTGCGTATGGCTTA
GCTGCTTTAGGGCGTCAACTTCATGTGCTCCAGCTCAATGAAACCCCTACAATTGAATTGCATG
CTCCTTTGGCCGATGATCTTATGGATTTCTATGAACGGATGGGTGATACGCTAGCTATTCAATA
TGGTGGCTCTGCTGCTCACAACAAGGTACTTGCTTAATTCTATTTACTGACTCGTTGGAGCATA
ATTTGTGCTTCCTCTACTGTGTAATACAATTCTCAAACAAATGCATCTTTCATTAAACCCTTCT
TCATATTCTTATTCAATTGTCCTATTTTTGTTTCTTTCAAAGCGATTTTTCTTCTTAATTGGCG
GTGAAGTCAATAGTCATAATATTATTTTTCTTCTAAAGATTTTTTTTTCTTTACACCCCAAAAG
TCCAAACTTCTCTTTTGAGTTATTAGTCTGACTGTCTGAGTACTCCATACTGCTGATATATGTT
ACAGATCTTCTGTGAGCAAAGAGGCCAATGGAAGGCAGCAACACAATCTCAGGAGTTCCTCCGG
ACCCTTCAGCGCTACTACAGTAATGCCTACACTGATCCTGAGAAGCAGGATTCTATAAATGTGT
AAGCTTCTCATGTCTGTATTACTCTATACATGTACAATAGGCAGAATTCTCGGAGAAAATTATA
TGACAGAACCATGGGAGCTGTTGGTATCGCTCTAGTATATTACCACAAACGGGTCTGTCTGACT
TTAGAATTGCAGGTTCTTGGGTCATTTCCAACCACAAGAAGGAAAACCTGCGCTTTGGAAATTG
GACTCAGATCAGCATTACAACATTGGCAGGCAAGGAACTTTAACTGAAGAAACTGGGAG
						
					

			
		

Sequences
Splice junction sequence	ATTTCCAACCACAAGAAGGAAAACCTGCGCTTTGGAAATTGGACTCAGATCAGCATTACAACAT TGGCAGGCAAGGAACTTTAACTGAAGAAACTGGGAGatataaacggctcctttgctcggtcgat ctctcgaaagacttcttcttcagctactcttacaatatcatgcgcagccttcagaagaacataa ctgacaag
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1377 Transcript exons: 4330248-4330470,4331104-4331180,4331304-4331491,4331576- 4331670,4331887-4332020,4332127-4332237,4332517-4332832, 4333132-4333253,4333396-4333506 ATATAAACGGCTCCTTTGCTCGGTCGATCTCTCGAAAGACTTCTTCTTCAGCTACTCTTACAAT ATCATGCGCAGCCTTCAGAAGAACATAACTGACAAGAATACTGGGCAAGTTGTTTATGAGACAA TGTTTGTTTGGAACGAGTTTCTGTCTCGAGCTATCCGGAACCATCTCAAGAATACAACGTGGAC TGTTGCCTTAATCCATGGATTTTTTAAACAGTCAAAGCTCTCAGTAGCTGGGAAGGAATTCTGG TTGACACTTATAGCAAGGCGCTCACGTCATTTTGCTGGAACCAGATTCTTGAAAAGAGGTGTTA ATGAAAAGGGTAGGGTTGCCAATGATGTTGAGACTGAACAAATTGTTTTTGAGGACACACCAGA TGAAATACCACATCAGATATCATCTGTTGTACAACATAGAGGATCCATACCTCTTATATGGTTT CAGGAAACTTCAAGACTCAACATTAGGCCAGATATCATACTGAAACCGGATGTAGACTACAAGA CAACTCGCCTTCATTTTGAGAACCTTGCACTTAGATATGGGAACCCAATAATTATCTTAAACTT GATCAAGACTCGTGAGAAGAAACCTCGTGAATCTTTGCTCCGTGCAGAATTCGCAAAGGCTATA CATTATATTAACAAGGGGCTGCCAGATGACAAACGTCTAAAGTTTTTACACATGGATCTGAGTA AGCTTTCTAGAAGGAAAGGTACCAATGTGCTTTCGCTGTTGAACAAGGTAGCATCAGATGTGTT GGATCTAACTGACTTCCTCCACTGTGAGATAACTACATCAAAGTATGAGGATGCATCAAGTGGA CAAGGAGCTGTTGCCAACTCAGGTGACATCGAAAACATCCAGGATCAAAATTTATGTGCAACTA AGCTAGTACCTCTTTTACTGCAAAAGGGTGTCCTCAGGACTAACTGCATAGACTGCTTGGACCG CACAAATGTTGCACAGTTTGCGTATGGCTTAGCTGCTTTAGGGCGTCAACTTCATGTGCTCCAG CTCAATGAAACCCCTACAATTGAATTGCATGCTCCTTTGGCCGATGATCTTATGGATTTCTATG AACGGATGGGTGATACGCTAGCTATTCAATATGGTGGCTCTGCTGCTCACAACAAGATCTTCTG TGAGCAAAGAGGCCAATGGAAGGCAGCAACACAATCTCAGGAGTTCCTCCGGACCCTTCAGCGC TACTACAGTAATGCCTACACTGATCCTGAGAAGCAGGATTCTATAAATGTGTTCTTGGGTCATT TCCAACCACAAGAAGGAAAACCTGCGCTTTGGAAATTGGACTCAGATCAGCATTACAACATTGG CAGGCAAGGAACTTTAACTGAAGAAACTGGGAG
Genomic sequence	ATATAAACGGCTCCTTTGCTCGGTCGATCTCTCGAAAGACTTCTTCTTCAGCTACTCTTACAAT ATCATGCGCAGCCTTCAGAAGAACATAACTGACAAGAATACTGGGCAAGTTGTTTATGAGACAA TGTTTGTTTGGAACGAGTTTCTGTCTCGAGCTATCCGGAACCATCTCAAGAATACAACGTGGAC TGTTGCCTTAATCCATGGATTTTTTAAACAGGTATTCTGCTGCAACATTCTAAGTCTCCGATAC TGCATTTGATGCGATCCATTCTTTTCATCTCTAATTGATGAGCTTATGCATATCCAGCACTGTC TATTCATCAACGAAGACCACAAGTAGGGATACTGCTAACTCAATGCCATCCCACTAACTTTTGT GTTTTACTCCACAATGTGTGACCTGACATGTAGTGAAAGCTCGAAATAAAGGGTTTGCAAAGGC ATGGCTTTGTATAACCTGCTGACATTTATCAGTTTGAGCTTCTTGAGGCTTTCCCGAGTCGAAA ATTTTGCTCGTAAGTCTCAGCAGACTGTTAATGCTTTTCCTAAGTTGTTAAATTCCCCTTTGTG CAGTCTTAGCAAACCAATGCTTAGATGTGAAATTACAGCGCTATTTATACTTATCTGTAATGTT TATTAAACGGTAAGCGTTGTGCCGTTGAGGTTCTTTGGTCCTGGTTCAAGACCTTTGAATTAGG ACATGTATGATTGGCAGTTCTAAATGTTTCTGATAAATAGGAACTTCTTATTGCTACTCTATTT GCATTTTCATTATGTAAGTACTGTGTTTCATACTTTCATCTGTCAAGTATTATACACAGAGCCA TGCTAAACATATTTTGTTGCACAGTCAAAGCTCTCAGTAGCTGGGAAGGAATTCTGGTTGACAC TTATAGCAAGGCGCTCACGTCATTTTGCTGGAACCAGGTTTGCATTACAATCCTTTGGGTTTAG CACCCTAATTTATGTTGAAAAGAATGGAGCCTAAACAATGTAATCTATGTCGCCTGATCTTACA ATGTTAATTTTGCATGTCATTTTCAAATACAGATTCTTGAAAAGAGGTGTTAATGAAAAGGGTA GGGTTGCCAATGATGTTGAGACTGAACAAATTGTTTTTGAGGACACACCAGATGAAATACCACA TCAGATATCATCTGTTGTACAACATAGAGGATCCATACCTCTTATATGGTTTCAGGAAACTTCA AGACTCAACATTAGGCCAGATATCATACGTAAGTTCTAGACTGTCAGTCTGTCATGCATTTGCC ATCTGTAGACTGTCTTCTCTAATACTCCAATCACCTTGCTACCTGCAGTGAAACCGGATGTAGA CTACAAGACAACTCGCCTTCATTTTGAGAACCTTGCACTTAGATATGGGAACCCAATAATTATC TTAAACTTGATCAAGGTGAGAATAAGTGTGGAATACAAATTTGGTTTATTCTCTGATGGATTTT TTTTTGATAGTTTACATGTGAATCACTACTGACTTATATATCTATCAATTTAATTGCAATATTT TTTTTCTGAAAAGGAAATTTAATTGCCATATTGACGACCTTATGTTCTTTGTTATCAATCTGGA GTTCTCATATCCATTTCGGGTCCCTTGTATTTTTTTCAGACTCGTGAGAAGAAACCTCGTGAAT CTTTGCTCCGTGCAGAATTCGCAAAGGCTATACATTATATTAACAAGGGGCTGCCAGATGACAA ACGTCTAAAGTTTTTACACATGGATCTGAGTAAGCTTTCTAGAAGGTAGTGTATCGTACTCCAA GGAAATCTTATATCCAAGCCATTAGGATTCAAGCTTGTAATTACTTGTAAATTGCCTTCGATGT TAAGTACTAAGTGCTATTTACAGGAAAGGTACCAATGTGCTTTCGCTGTTGAACAAGGTAGCAT CAGATGTGTTGGATCTAACTGACTTCCTCCACTGTGAGATAACTACATCAAAGTATGAGGATGC ATCAAGGTAACATTTGGCCTACTTAAGAGTTATAAGAGTTATATTAAAATTTTGCCTGGCCACC AGAAACTACCTGATGTTGTTTGTCAAAAAATGTTCCTTCATGATGTTACCCTGTAACATATTCA TTCTTTGGATTAGTCAAAGCTGTGCCTTGGAGAACAGTAGAACACACAAATAAGGCAGCTTTTG GAACAATTGGGAGTAGCTGCTCTCCTATTTGGTCTTATCTTATGAGCTCACATAACAGTACTAA TGCATTTTTTTTCTTTTTAAATGCATCAGTGGACAAGGAGCTGTTGCCAACTCAGGTGACATCG AAAACATCCAGGATCAAAATTTATGTGCAACTAAGCTAGTACCTCTTTTACTGCAAAAGGGTGT CCTCAGGACTAACTGCATAGACTGCTTGGACCGCACAAATGTTGCACAGTTTGCGTATGGCTTA GCTGCTTTAGGGCGTCAACTTCATGTGCTCCAGCTCAATGAAACCCCTACAATTGAATTGCATG CTCCTTTGGCCGATGATCTTATGGATTTCTATGAACGGATGGGTGATACGCTAGCTATTCAATA TGGTGGCTCTGCTGCTCACAACAAGGTACTTGCTTAATTCTATTTACTGACTCGTTGGAGCATA ATTTGTGCTTCCTCTACTGTGTAATACAATTCTCAAACAAATGCATCTTTCATTAAACCCTTCT TCATATTCTTATTCAATTGTCCTATTTTTGTTTCTTTCAAAGCGATTTTTCTTCTTAATTGGCG GTGAAGTCAATAGTCATAATATTATTTTTCTTCTAAAGATTTTTTTTTCTTTACACCCCAAAAG TCCAAACTTCTCTTTTGAGTTATTAGTCTGACTGTCTGAGTACTCCATACTGCTGATATATGTT ACAGATCTTCTGTGAGCAAAGAGGCCAATGGAAGGCAGCAACACAATCTCAGGAGTTCCTCCGG ACCCTTCAGCGCTACTACAGTAATGCCTACACTGATCCTGAGAAGCAGGATTCTATAAATGTGT AAGCTTCTCATGTCTGTATTACTCTATACATGTACAATAGGCAGAATTCTCGGAGAAAATTATA TGACAGAACCATGGGAGCTGTTGGTATCGCTCTAGTATATTACCACAAACGGGTCTGTCTGACT TTAGAATTGCAGGTTCTTGGGTCATTTCCAACCACAAGAAGGAAAACCTGCGCTTTGGAAATTG GACTCAGATCAGCATTACAACATTGGCAGGCAAGGAACTTTAACTGAAGAAACTGGGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_004587* 						
					
						PMCS
						0.233322353

Conservation Information
Conserved circRNAs	osi_circ_004587*
PMCS	0.233322353

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							4330316-4333503(+)
4330421-4333489(-)
						
					

						Potential amino acid sequence
						
							MRSLQKNITDKNTGQVVYETMFVWNEFLSRAIRNHLKNTTWTVALIHGFFKQSKLSVAGKEFWL
TLIARRSRHFAGTRFLKRGVNEKGRVANDVETEQIVFEDTPDEIPHQISSVVQHRGSIPLIWFQ
ETSRLNIRPDIILKPDVDYKTTRLHFENLALRYGNPIIILNLIKTREKKPRESLLRAEFAKAIH
YINKGLPDDKRLKFLHMDLSKLSRRKGTNVLSLLNKVASDVLDLTDFLHCEITTSKYEDASSGQ
GAVANSGDIENIQDQNLCATKLVPLLLQKGVLRTNCIDCLDRTNVAQFAYGLAALGRQLHVLQL
NETPTIELHAPLADDLMDFYERMGDTLAIQYGGSAAHNKIFCEQRGQWKAATQSQEFLRTLQRY
YSNAYTDPEKQDSINVFLGHFQPQEGKPALWKLDSDQHYNIGRQGTLTEETGRYKRLLCSVDLS
KDFFFSYSYNIMRSLQKNITDKNTGQVVYETMFVWNEFLSRAIRNHLKNTTWTVALIHGFFKQS
KLSVAGKEFWLTLIARRSRHFAGTRFLKRGVNEKGRVANDVETEQIVFEDTPDEIPHQISSVVQ
HRGSIPLIWFQETSRLNIRPDIILKPDVDYKTTRLHFENLALRYGNPIIILNLIKTREKKPRES
LLRAEFAKAIHYINKGLPDDKRLKFLHMDLSKLSRRKGTNVLSLLNKVASDVLDLTDFLHCEIT
TSKYEDASSGQGAVANSGDIENIQDQNLCATKLVPLLLQKGVLRTNCIDCLDRTNVAQFAYGLA
ALGRQLHVLQLNETPTIELHAPLADDLMDFYERMGDTLAIQYGGSAAHNKIFCEQRGQWKAATQ
SQEFLRTLQRYYSNAYTDPEKQDSINVFLGHFQPQEGKPALWKLDSDQHYNIGRQGTLTEETGR
YKRLLCSVDLSKDFFFSYSYNIMRSLQKNITDKNTGQVVYETMFVWNEFLSRAIRNHLKNTTWT
VALIHGFFKQSKLSVAGKEFWLTLIARRSRHFAGTRFLKRGVNEKGRVANDVETEQIVFEDTPD
EIPHQISSVVQHRGSIPLIWFQETSRLNIRPDIILKPDVDYKTTRLHFENLALRYGNPIIILNL
IKTREKKPRESLLRAEFAKAIHYINKGLPDDKRLKFLHMDLSKLSRRKGTNVLSLLNKVASDVL
DLTDFLHCEITTSKYEDASSGQGAVANSGDIENIQDQNLCATKLVPLLLQKGVLRTNCIDCLDR
TNVAQFAYGLAALGRQLHVLQLNETPTIELHAPLADDLMDFYERMGDTLAIQYGGSAAHNKIFC
EQRGQWKAATQSQEFLRTLQRYYSNAYTDPEKQDSINVFLGHFQPQEGKPALWKLDSDQHYNIG
RQGTLTEETGRYKRLLCSVDLSKDFFFSYSYNIMRSLQKNITDKNTGQVVYETMFVWNEFLSRA
IRNHLKNTTWTVALIHGFFKQSKLSVAGKEFWLTLIARRSRHFAGTRFLKRGVNEKGRVANDVE
TEQIVFEDTPDEIPHQISSVVQHRGSIPLIWFQETSRLNIRPDIILKPDVDYKTTRLHFENLAL
RYGNPIIILNLIKTREKKPRESLLRAEFAKAIHYINKGLPDDKRLKFLHMDLSKLSRRKGTNVL
SLLNKVASDVLDLTDFLHCEITTSKYEDASSGQGAVANSGDIENIQDQNLCATKLVPLLLQKGV
LRTNCIDCLDRTNVAQFAYGLAALGRQLHVLQLNETPTIELHAPLADDLMDFYERMGDTLAIQY
GGSAAHNKIFCEQRGQWKAATQSQEFLRTLQRYYSNAYTDPEKQDSINVFLGHFQPQEGKPALW
KLDSDQHYNIGRQGTLTEETG(+)
MVPDSSRQKLVPNKHCLINNLPSILVSYVLLKAAHDIVRVAEEEVFREIDRAKEPFISPSFFS*
(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	4330316-4333503(+) 4330421-4333489(-)
Potential amino acid sequence	MRSLQKNITDKNTGQVVYETMFVWNEFLSRAIRNHLKNTTWTVALIHGFFKQSKLSVAGKEFWL TLIARRSRHFAGTRFLKRGVNEKGRVANDVETEQIVFEDTPDEIPHQISSVVQHRGSIPLIWFQ ETSRLNIRPDIILKPDVDYKTTRLHFENLALRYGNPIIILNLIKTREKKPRESLLRAEFAKAIH YINKGLPDDKRLKFLHMDLSKLSRRKGTNVLSLLNKVASDVLDLTDFLHCEITTSKYEDASSGQ GAVANSGDIENIQDQNLCATKLVPLLLQKGVLRTNCIDCLDRTNVAQFAYGLAALGRQLHVLQL NETPTIELHAPLADDLMDFYERMGDTLAIQYGGSAAHNKIFCEQRGQWKAATQSQEFLRTLQRY YSNAYTDPEKQDSINVFLGHFQPQEGKPALWKLDSDQHYNIGRQGTLTEETGRYKRLLCSVDLS KDFFFSYSYNIMRSLQKNITDKNTGQVVYETMFVWNEFLSRAIRNHLKNTTWTVALIHGFFKQS KLSVAGKEFWLTLIARRSRHFAGTRFLKRGVNEKGRVANDVETEQIVFEDTPDEIPHQISSVVQ HRGSIPLIWFQETSRLNIRPDIILKPDVDYKTTRLHFENLALRYGNPIIILNLIKTREKKPRES LLRAEFAKAIHYINKGLPDDKRLKFLHMDLSKLSRRKGTNVLSLLNKVASDVLDLTDFLHCEIT TSKYEDASSGQGAVANSGDIENIQDQNLCATKLVPLLLQKGVLRTNCIDCLDRTNVAQFAYGLA ALGRQLHVLQLNETPTIELHAPLADDLMDFYERMGDTLAIQYGGSAAHNKIFCEQRGQWKAATQ SQEFLRTLQRYYSNAYTDPEKQDSINVFLGHFQPQEGKPALWKLDSDQHYNIGRQGTLTEETGR YKRLLCSVDLSKDFFFSYSYNIMRSLQKNITDKNTGQVVYETMFVWNEFLSRAIRNHLKNTTWT VALIHGFFKQSKLSVAGKEFWLTLIARRSRHFAGTRFLKRGVNEKGRVANDVETEQIVFEDTPD EIPHQISSVVQHRGSIPLIWFQETSRLNIRPDIILKPDVDYKTTRLHFENLALRYGNPIIILNL IKTREKKPRESLLRAEFAKAIHYINKGLPDDKRLKFLHMDLSKLSRRKGTNVLSLLNKVASDVL DLTDFLHCEITTSKYEDASSGQGAVANSGDIENIQDQNLCATKLVPLLLQKGVLRTNCIDCLDR TNVAQFAYGLAALGRQLHVLQLNETPTIELHAPLADDLMDFYERMGDTLAIQYGGSAAHNKIFC EQRGQWKAATQSQEFLRTLQRYYSNAYTDPEKQDSINVFLGHFQPQEGKPALWKLDSDQHYNIG RQGTLTEETGRYKRLLCSVDLSKDFFFSYSYNIMRSLQKNITDKNTGQVVYETMFVWNEFLSRA IRNHLKNTTWTVALIHGFFKQSKLSVAGKEFWLTLIARRSRHFAGTRFLKRGVNEKGRVANDVE TEQIVFEDTPDEIPHQISSVVQHRGSIPLIWFQETSRLNIRPDIILKPDVDYKTTRLHFENLAL RYGNPIIILNLIKTREKKPRESLLRAEFAKAIHYINKGLPDDKRLKFLHMDLSKLSRRKGTNVL SLLNKVASDVLDLTDFLHCEITTSKYEDASSGQGAVANSGDIENIQDQNLCATKLVPLLLQKGV LRTNCIDCLDRTNVAQFAYGLAALGRQLHVLQLNETPTIELHAPLADDLMDFYERMGDTLAIQY GGSAAHNKIFCEQRGQWKAATQSQEFLRTLQRYYSNAYTDPEKQDSINVFLGHFQPQEGKPALW KLDSDQHYNIGRQGTLTEETG(+) MVPDSSRQKLVPNKHCLINNLPSILVSYVLLKAAHDIVRVAEEEVFREIDRAKEPFISPSFFS* (-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os03g0182400_circ_g.9

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