Plant Circular RNA Database

Detail information of AT2G44950_circ_g.5

			
						 General Information
					
						CircRNA Name
						AT2G44950_circ_g.5
					
						ID in PlantcircBase
						ath_circ_018429
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr2: 18545004-18547705  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						KNIFE, PcircRNA_finder
					
						Parent gene
						
							AT2G44950						
					
						Parent gene annotation
						
							E3 ubiquitin-protein ligase BRE1-like 1
							
						Parent gene strand
						-
					
						Alternative splicing
						
							2_circ_igg.3 2_circ_igg.4 2_circ_ag.5 2_circ_ag.6 AT2G44860_circ_g.1 AT2G44860_circ_g.2 AT2G44860_circ_g.3 AT2G44870_circ_g.1 AT2G44900_circ_g.1 AT2G44900_circ_g.2 AT2G44910_circ_g.1 AT2G44910_circ_g.2 AT2G44920_circ_g.1 AT2G44920_circ_g.2 AT2G44920_circ_g.3 AT2G44950_circ_g.1 AT2G44950_circ_g.2 AT2G44950_circ_g.3 AT2G44950_circ_g.4 AT2G44950_circ_g.6 AT2G44950_circ_g.7 AT2G44970_circ_g.1 AT2G44970_circ_g.2 AT2G44970_circ_g.3 AT2G44970_circ_g.4 AT2G44970_circ_g.5 AT2G44980_circ_g.1 AT2G45000_circ_g.1 AT2G45000_circ_g.2 AT2G45000_circ_g.3 AT2G45023_circ_g.1 AT2G45030_circ_g.1 AT2G45030_circ_g.2 AT2G45030_circ_g.3 AT2G45060_circ_g.1 AT2G45060_circ_g.2 AT2G45060_circ_g.3 AT2G45060_circ_g.4 AT2G45060_circ_g.5 AT2G45100_circ_g.1 AT2G45135_circ_g.1 AT2G45140_circ_g.1 AT2G45140_circ_g.2 AT2G45140_circ_g.3 AT2G45160_circ_g.1 AT2G45170_circ_g.1 AT2G45170_circ_g.2 AT2G45170_circ_g.3 AT2G45170_circ_g.4 AT2G45180_circ_g.1 AT2G45180_circ_g.2 AT2G45180_circ_g.3 AT2G45180_circ_g.4 AT2G45180_circ_g.5 AT2G45180_circ_g.6 AT2G45180_circ_g.7 AT2G45180_circ_g.8 AT2G45180_circ_g.9 AT2G45180_circ_g.10 AT2G45180_circ_g.11 AT2G45180_circ_g.12 AT2G45180_circ_g.13 AT2G45180_circ_g.14 AT2G45180_circ_g.15 AT2G45180_circ_g.16 AT2G45190_circ_g.1 AT2G45190_circ_g.2 AT2G45190_circ_g.3 AT2G45200_circ_g.1 AT2G45200_circ_g.2 AT2G45200_circ_g.3 AT2G45200_circ_g.4 AT2G45200_circ_g.5 AT2G45200_circ_g.6 AT2G45240_circ_g.1 AT2G45240_circ_g.2 AT2G45240_circ_g.3 AT2G45240_circ_g.4 AT2G45240_circ_g.5 AT2G45240_circ_g.6 AT2G45240_circ_g.7 AT2G45240_circ_g.8 AT2G45240_circ_g.9 2_circ_ag.10 AT2G45250_circ_g.1 AT2G45250_circ_g.2 						
					
						Support reads
						2
					
						Tissues
						whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT2G44950.1:9
AT2G44950.2:9

General Information
CircRNA Name	AT2G44950_circ_g.5
ID in PlantcircBase	ath_circ_018429
Alias	NA
Organism	Arabidpsis thaliana
Position	chr2: 18545004-18547705 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	KNIFE, PcircRNA_finder
Parent gene	AT2G44950
Parent gene annotation	E3 ubiquitin-protein ligase BRE1-like 1
Parent gene strand	-
Alternative splicing	2_circ_igg.3 2_circ_igg.4 2_circ_ag.5 2_circ_ag.6 AT2G44860_circ_g.1 AT2G44860_circ_g.2 AT2G44860_circ_g.3 AT2G44870_circ_g.1 AT2G44900_circ_g.1 AT2G44900_circ_g.2 AT2G44910_circ_g.1 AT2G44910_circ_g.2 AT2G44920_circ_g.1 AT2G44920_circ_g.2 AT2G44920_circ_g.3 AT2G44950_circ_g.1 AT2G44950_circ_g.2 AT2G44950_circ_g.3 AT2G44950_circ_g.4 AT2G44950_circ_g.6 AT2G44950_circ_g.7 AT2G44970_circ_g.1 AT2G44970_circ_g.2 AT2G44970_circ_g.3 AT2G44970_circ_g.4 AT2G44970_circ_g.5 AT2G44980_circ_g.1 AT2G45000_circ_g.1 AT2G45000_circ_g.2 AT2G45000_circ_g.3 AT2G45023_circ_g.1 AT2G45030_circ_g.1 AT2G45030_circ_g.2 AT2G45030_circ_g.3 AT2G45060_circ_g.1 AT2G45060_circ_g.2 AT2G45060_circ_g.3 AT2G45060_circ_g.4 AT2G45060_circ_g.5 AT2G45100_circ_g.1 AT2G45135_circ_g.1 AT2G45140_circ_g.1 AT2G45140_circ_g.2 AT2G45140_circ_g.3 AT2G45160_circ_g.1 AT2G45170_circ_g.1 AT2G45170_circ_g.2 AT2G45170_circ_g.3 AT2G45170_circ_g.4 AT2G45180_circ_g.1 AT2G45180_circ_g.2 AT2G45180_circ_g.3 AT2G45180_circ_g.4 AT2G45180_circ_g.5 AT2G45180_circ_g.6 AT2G45180_circ_g.7 AT2G45180_circ_g.8 AT2G45180_circ_g.9 AT2G45180_circ_g.10 AT2G45180_circ_g.11 AT2G45180_circ_g.12 AT2G45180_circ_g.13 AT2G45180_circ_g.14 AT2G45180_circ_g.15 AT2G45180_circ_g.16 AT2G45190_circ_g.1 AT2G45190_circ_g.2 AT2G45190_circ_g.3 AT2G45200_circ_g.1 AT2G45200_circ_g.2 AT2G45200_circ_g.3 AT2G45200_circ_g.4 AT2G45200_circ_g.5 AT2G45200_circ_g.6 AT2G45240_circ_g.1 AT2G45240_circ_g.2 AT2G45240_circ_g.3 AT2G45240_circ_g.4 AT2G45240_circ_g.5 AT2G45240_circ_g.6 AT2G45240_circ_g.7 AT2G45240_circ_g.8 AT2G45240_circ_g.9 2_circ_ag.10 AT2G45250_circ_g.1 AT2G45250_circ_g.2
Support reads	2
Tissues	whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT2G44950.1:9 AT2G44950.2:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCGGGCTTAAGTTGTTCATACCCTCCTTGTTTACAAACCTATGAGCTCCGCTGCTTGAATCACT
CACACGAACAGAGCATGATTCCACTGAAGCTGTAAGcgtagcattcaggtcacctaactgagaa
gcataatcagctgatctcaattgcaatgcttcatactcttttgtctgttcaccaattaagctta
ttaagtaa

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CGTAGCATTCAGGTCACCTAACTGAGAAGCATAATCAGCTGATCTCAATTGCAATGCTTCATAC
TCTTTTGTCTGTTCACCAATTAAGCTTATTAAGTAAGCATAACATAAACTGTAACAATAAGCAT
CAATCACTGTTCACATTATTTCCCACCTTCCTACATAGAACCCCAGAGAGGGACTGGACATCAG
CCCGCAGAGAATGAATACCTCCAGCAGTCTCTTTATAATTGTTTAATTGACTACGCATGGAACT
CATTTCCTCGGGGAACGAAGAAATTAATGCCTTCATATCTGCAAAGATTTCTTTTCTACCTGAC
ATACGAATAACTTAATCAGACTCCAAAGTGAAACAGGTGTGGGTGGGAGATACAGAATTGGAAG
TCAAAGTAATCAATTTGTGACCTCGCTCTCTTGATATATTTCCCAGCCTAGTCTTGATTCGCAT
TTTTTCATCCAGTTGTTTCTGTATCTCCGAATCCAAAGAAGCCATTCTAGAATCAGTAACAGCA
GACGTCTTTCGAGAAACATCACCTAGTTCATTTTTTATATTTATCTCCCTTTCCTTCCAGACTA
TACTATCTTTTTCAACCTGAAATTTTCGAATGGAGGAAAGCTTCACAACTAAATATACAACGTA
AATTTTATAAACATAGATACAAAATGAAAATCGCAAACCAGATATAACCTGCAGTTTCTCAAGT
AAAGCCATATACTGGAAAACTGCTTCTTTGGATTTTTCTAGCTGGTCTTTCAAAGAAAGGCAGG
CTTGAGAAGATGAGATGCACCTCACAGACTTTGACTTGTTCTGTTAGAAAACTCTTACATCAGT
TTTAGCAATAGGAAGAGGCTACCATTCCACAAATTTTCATATATCAAACCCCATACAGAGACAA
ACTAATACAAATACCCCAATTGGATCAATACACTGACCTGTAAATTACTCATTTTTCCAAGCAT
CTTTGTCCTCTCCTCATGAAGATTTTTTAGCTGTTGTAGCCTGCCTGAAGCCAGGACCTACCGA
AACCAGGCCGTTATCAACCCAAAACTTAAAGAATTACCAATGAAAACAAATCAGAAAAACAAAG
ATACCGTTAACTCTTTCAGAACTGTTTCCATGTCTTGCAGATCCCTTTGTTTATCCCTCTCCCG
ATCACTGGTAGCAAGCTTATTTCCAAGACTCAACACTGGGAAAAACGCCCCAGCTGTTGCATCC
CTTTCTGCTCTCAATGCTGACAAGTCACCATTACACTGCTGAAGCTCCACAACCTCATCCTCTA
GCTCCCCTTCGAATAGACCAAATAAAGTATAATATCAGTTGATGCGGTAGTCAAGAAGCATTAA
TCCAAAAGCAGGCATGTAAACTAAAATAAATTTTAACTCTTTGAATTTCTTAACTGTGGCTACT
GTCAGTATTGAAATCTTACATCTTAAGGTAAACGGGTAATTTATCAACAAAATTAAGATGCTTC
ACTTATGTGGATGTATGTCATTCTCAAAGAATTACCAGCTTCTCTATCTCCTAAAATCTACCGA
AATATATAAATATGGGTAAATGGTATAAAAGAAAACTAAGAAGTTCATGTCTCAGAAGGGTTTT
GTACACCCATCAGTTCGCTAATGAGTATATCTTCCACAGCTACATGTCTTCTTAACAGCTGGCT
CTACCATAGAGGTTTTCTTCCAGTCTTAATGTATCTCTCTCTTCAATCTTAATCTCTATGATCT
AAATCCAATCATGGCTATTAAACAACTGAGTAGTGCTGGACATAAATACACAGGCGTGGAATTG
GAAGATTCACAATTTGATCACCTCTACTTACACTTATCCTCATCAATCAAAAGCGAGATATGAT
TTCAGTAGCTTTTCATGTATATAGGACCTTTTTTTGTCAAGCCACGTATATGATTACAAATTTA
CATTTGATGCATGAATACTATATCCATATAAACAATGCCAATTAAAAAATCCATTTTAACAGTA
TATAGTCGAGTGAGACGAGACTAAGTAGCTACCTCTTATTCGTTTGAGGTCTACTCTAACTTTA
GCATCAGCATCGCGATGACTCTGCAATTCTCTAGAAAGTGATTTGAACTTCACAAGTACATCAT
CTAGATCCCCTCTGAAACTTTTAATTTCTGATTCCAACTCACTCAGAGCTAGCTGACCGCACAA
ATCTAGAAAAGAAAGCAATTCCACATAGGACCTGGGTTAATACTAAAATGTTATAAAGGCCATA
ACAAGAGCTGACAATTGATCGCAGTGGAAGTCATACCTTTACCAAGATTGGTTCTGAGAACTGT
GGGATATAATTCATCCTTCAGACACCTCAAATCCTCTGTCGCGGCTACTAGATTATACAAGGTT
TGCGTCATCTGGCTTGACGTATTCACTCCATTTTCTTCCATCTGATTCGAGCAGATATTGGATG
AGGAGCTCTCAGTAGCACCAGTTTCAAGTAGCCGGTTGATGAAATCGTTTTTCACGGCTGGAGA
AGACCCATCTGTGTAGCAATTTAAAGTTAACCTTTCAAAAAGTCATATTTGTAACATATAAAAC
CAAATCTAAACTAGATCCTAGCACTAACAGAACGAAGAAAAGGCGGGCTTAAGTTGTTCATACC
CTCCTTGTTTACAAACCTATGAGCTCCGCTGCTTGAATCACTCACACGAACAGAGCATGATTCC
ACTGAAGCTGTAAG
						
					

			
		

Sequences
Splice junction sequence	GCGGGCTTAAGTTGTTCATACCCTCCTTGTTTACAAACCTATGAGCTCCGCTGCTTGAATCACT CACACGAACAGAGCATGATTCCACTGAAGCTGTAAGcgtagcattcaggtcacctaactgagaa gcataatcagctgatctcaattgcaatgcttcatactcttttgtctgttcaccaattaagctta ttaagtaa
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CGTAGCATTCAGGTCACCTAACTGAGAAGCATAATCAGCTGATCTCAATTGCAATGCTTCATAC TCTTTTGTCTGTTCACCAATTAAGCTTATTAAGTAAGCATAACATAAACTGTAACAATAAGCAT CAATCACTGTTCACATTATTTCCCACCTTCCTACATAGAACCCCAGAGAGGGACTGGACATCAG CCCGCAGAGAATGAATACCTCCAGCAGTCTCTTTATAATTGTTTAATTGACTACGCATGGAACT CATTTCCTCGGGGAACGAAGAAATTAATGCCTTCATATCTGCAAAGATTTCTTTTCTACCTGAC ATACGAATAACTTAATCAGACTCCAAAGTGAAACAGGTGTGGGTGGGAGATACAGAATTGGAAG TCAAAGTAATCAATTTGTGACCTCGCTCTCTTGATATATTTCCCAGCCTAGTCTTGATTCGCAT TTTTTCATCCAGTTGTTTCTGTATCTCCGAATCCAAAGAAGCCATTCTAGAATCAGTAACAGCA GACGTCTTTCGAGAAACATCACCTAGTTCATTTTTTATATTTATCTCCCTTTCCTTCCAGACTA TACTATCTTTTTCAACCTGAAATTTTCGAATGGAGGAAAGCTTCACAACTAAATATACAACGTA AATTTTATAAACATAGATACAAAATGAAAATCGCAAACCAGATATAACCTGCAGTTTCTCAAGT AAAGCCATATACTGGAAAACTGCTTCTTTGGATTTTTCTAGCTGGTCTTTCAAAGAAAGGCAGG CTTGAGAAGATGAGATGCACCTCACAGACTTTGACTTGTTCTGTTAGAAAACTCTTACATCAGT TTTAGCAATAGGAAGAGGCTACCATTCCACAAATTTTCATATATCAAACCCCATACAGAGACAA ACTAATACAAATACCCCAATTGGATCAATACACTGACCTGTAAATTACTCATTTTTCCAAGCAT CTTTGTCCTCTCCTCATGAAGATTTTTTAGCTGTTGTAGCCTGCCTGAAGCCAGGACCTACCGA AACCAGGCCGTTATCAACCCAAAACTTAAAGAATTACCAATGAAAACAAATCAGAAAAACAAAG ATACCGTTAACTCTTTCAGAACTGTTTCCATGTCTTGCAGATCCCTTTGTTTATCCCTCTCCCG ATCACTGGTAGCAAGCTTATTTCCAAGACTCAACACTGGGAAAAACGCCCCAGCTGTTGCATCC CTTTCTGCTCTCAATGCTGACAAGTCACCATTACACTGCTGAAGCTCCACAACCTCATCCTCTA GCTCCCCTTCGAATAGACCAAATAAAGTATAATATCAGTTGATGCGGTAGTCAAGAAGCATTAA TCCAAAAGCAGGCATGTAAACTAAAATAAATTTTAACTCTTTGAATTTCTTAACTGTGGCTACT GTCAGTATTGAAATCTTACATCTTAAGGTAAACGGGTAATTTATCAACAAAATTAAGATGCTTC ACTTATGTGGATGTATGTCATTCTCAAAGAATTACCAGCTTCTCTATCTCCTAAAATCTACCGA AATATATAAATATGGGTAAATGGTATAAAAGAAAACTAAGAAGTTCATGTCTCAGAAGGGTTTT GTACACCCATCAGTTCGCTAATGAGTATATCTTCCACAGCTACATGTCTTCTTAACAGCTGGCT CTACCATAGAGGTTTTCTTCCAGTCTTAATGTATCTCTCTCTTCAATCTTAATCTCTATGATCT AAATCCAATCATGGCTATTAAACAACTGAGTAGTGCTGGACATAAATACACAGGCGTGGAATTG GAAGATTCACAATTTGATCACCTCTACTTACACTTATCCTCATCAATCAAAAGCGAGATATGAT TTCAGTAGCTTTTCATGTATATAGGACCTTTTTTTGTCAAGCCACGTATATGATTACAAATTTA CATTTGATGCATGAATACTATATCCATATAAACAATGCCAATTAAAAAATCCATTTTAACAGTA TATAGTCGAGTGAGACGAGACTAAGTAGCTACCTCTTATTCGTTTGAGGTCTACTCTAACTTTA GCATCAGCATCGCGATGACTCTGCAATTCTCTAGAAAGTGATTTGAACTTCACAAGTACATCAT CTAGATCCCCTCTGAAACTTTTAATTTCTGATTCCAACTCACTCAGAGCTAGCTGACCGCACAA ATCTAGAAAAGAAAGCAATTCCACATAGGACCTGGGTTAATACTAAAATGTTATAAAGGCCATA ACAAGAGCTGACAATTGATCGCAGTGGAAGTCATACCTTTACCAAGATTGGTTCTGAGAACTGT GGGATATAATTCATCCTTCAGACACCTCAAATCCTCTGTCGCGGCTACTAGATTATACAAGGTT TGCGTCATCTGGCTTGACGTATTCACTCCATTTTCTTCCATCTGATTCGAGCAGATATTGGATG AGGAGCTCTCAGTAGCACCAGTTTCAAGTAGCCGGTTGATGAAATCGTTTTTCACGGCTGGAGA AGACCCATCTGTGTAGCAATTTAAAGTTAACCTTTCAAAAAGTCATATTTGTAACATATAAAAC CAAATCTAAACTAGATCCTAGCACTAACAGAACGAAGAAAAGGCGGGCTTAAGTTGTTCATACC CTCCTTGTTTACAAACCTATGAGCTCCGCTGCTTGAATCACTCACACGAACAGAGCATGATTCC ACTGAAGCTGTAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.120633805

Conservation Information
Conserved circRNAs	NA
PMCS	0.120633805

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							18547413-18545006(-)
						
					

						Potential amino acid sequence
						
							MEENGVNTSSQMTQTLYNLVAATEDLRCLKDELYPTVLRTNLGKDLCGQLALSELESEIKSFRG
DLDDVLVKFKSLSRELQSHRDADAKVRVDLKRIRGELEDEVVELQQCNGDLSALRAERDATAGA
FFPVLSLGNKLATSDRERDKQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQN
KSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEKDSIVWKEREINIKNELGDVSRK
TSAVTDSRMASLDSEIQKQLDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEMSSMRSQL
NNYKETAGGIHSLRADVQSLSGVLCRKTKEYEALQLRSADYASQLGDLNATLTASVESCSVRVS
DSSSGAHRFVNKEDGSSPAVKNDFINRLLETGATESSSSNICSNQMEENGVNTSSQMTQTLYNL
VAATEDLRCLKDELYPTVLRTNLGKDLCGQLALSELESEIKSFRGDLDDVLVKFKSLSRELQSH
RDADAKVRVDLKRIRGELEDEVVELQQCNGDLSALRAERDATAGAFFPVLSLGNKLATSDRERD
KQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQACLSLKD
QLEKSKEAVFQYMALLEKLQVEKDSIVWKEREINIKNELGDVSRKTSAVTDSRMASLDSEIQKQ
LDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEMSSMRSQLNNYKETAGGIHSLRADVQS
LSGVLCRKTKEYEALQLRSADYASQLGDLNATLTASVESCSVRVSDSSSGAHRFVNKEDGSSPA
VKNDFINRLLETGATESSSSNICSNQMEENGVNTSSQMTQTLYNLVAATEDLRCLKDELYPTVL
RTNLGKDLCGQLALSELESEIKSFRGDLDDVLVKFKSLSRELQSHRDADAKVRVDLKRIRGELE
DEVVELQQCNGDLSALRAERDATAGAFFPVLSLGNKLATSDRERDKQRDLQDMETVLKELTVLA
SGRLQQLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKL
QVEKDSIVWKEREINIKNELGDVSRKTSAVTDSRMASLDSEIQKQLDEKMRIKTRLGNISRERG
RKEIFADMKALISSFPEEMSSMRSQLNNYKETAGGIHSLRADVQSLSGVLCRKTKEYEALQLRS
ADYASQLGDLNATLTASVESCSVRVSDSSSGAHRFVNKEDGSSPAVKNDFINRLLETGATESSS
SNICSNQMEENGVNTSSQMTQTLYNLVAATEDLRCLKDELYPTVLRTNLGKDLCGQLALSELES
EIKSFRGDLDDVLVKFKSLSRELQSHRDADAKVRVDLKRIRGELEDEVVELQQCNGDLSALRAE
RDATAGAFFPVLSLGNKLATSDRERDKQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLG
KMSNLQNKSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEKDSIVWKEREINIKNE
LGDVSRKTSAVTDSRMASLDSEIQKQLDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEM
SSMRSQLNNYKETAGGIHSLRADVQSLSGVLCRKTKEYEALQLRSADYASQLGDLNAT(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	18547413-18545006(-)
Potential amino acid sequence	MEENGVNTSSQMTQTLYNLVAATEDLRCLKDELYPTVLRTNLGKDLCGQLALSELESEIKSFRG DLDDVLVKFKSLSRELQSHRDADAKVRVDLKRIRGELEDEVVELQQCNGDLSALRAERDATAGA FFPVLSLGNKLATSDRERDKQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQN KSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEKDSIVWKEREINIKNELGDVSRK TSAVTDSRMASLDSEIQKQLDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEMSSMRSQL NNYKETAGGIHSLRADVQSLSGVLCRKTKEYEALQLRSADYASQLGDLNATLTASVESCSVRVS DSSSGAHRFVNKEDGSSPAVKNDFINRLLETGATESSSSNICSNQMEENGVNTSSQMTQTLYNL VAATEDLRCLKDELYPTVLRTNLGKDLCGQLALSELESEIKSFRGDLDDVLVKFKSLSRELQSH RDADAKVRVDLKRIRGELEDEVVELQQCNGDLSALRAERDATAGAFFPVLSLGNKLATSDRERD KQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQACLSLKD QLEKSKEAVFQYMALLEKLQVEKDSIVWKEREINIKNELGDVSRKTSAVTDSRMASLDSEIQKQ LDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEMSSMRSQLNNYKETAGGIHSLRADVQS LSGVLCRKTKEYEALQLRSADYASQLGDLNATLTASVESCSVRVSDSSSGAHRFVNKEDGSSPA VKNDFINRLLETGATESSSSNICSNQMEENGVNTSSQMTQTLYNLVAATEDLRCLKDELYPTVL RTNLGKDLCGQLALSELESEIKSFRGDLDDVLVKFKSLSRELQSHRDADAKVRVDLKRIRGELE DEVVELQQCNGDLSALRAERDATAGAFFPVLSLGNKLATSDRERDKQRDLQDMETVLKELTVLA SGRLQQLKNLHEERTKMLGKMSNLQNKSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKL QVEKDSIVWKEREINIKNELGDVSRKTSAVTDSRMASLDSEIQKQLDEKMRIKTRLGNISRERG RKEIFADMKALISSFPEEMSSMRSQLNNYKETAGGIHSLRADVQSLSGVLCRKTKEYEALQLRS ADYASQLGDLNATLTASVESCSVRVSDSSSGAHRFVNKEDGSSPAVKNDFINRLLETGATESSS SNICSNQMEENGVNTSSQMTQTLYNLVAATEDLRCLKDELYPTVLRTNLGKDLCGQLALSELES EIKSFRGDLDDVLVKFKSLSRELQSHRDADAKVRVDLKRIRGELEDEVVELQQCNGDLSALRAE RDATAGAFFPVLSLGNKLATSDRERDKQRDLQDMETVLKELTVLASGRLQQLKNLHEERTKMLG KMSNLQNKSKSVRCISSSQACLSLKDQLEKSKEAVFQYMALLEKLQVEKDSIVWKEREINIKNE LGDVSRKTSAVTDSRMASLDSEIQKQLDEKMRIKTRLGNISRERGRKEIFADMKALISSFPEEM SSMRSQLNNYKETAGGIHSLRADVQSLSGVLCRKTKEYEALQLRSADYASQLGDLNAT(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT2G44950_circ_g.5

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