Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0189600_circ_g.1 |
ID in PlantcircBase | osa_circ_029992 |
Alias | NA |
Organism | Oryza sativa |
Position | chr6: 4531493-4538694 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Os06g0189600 |
Parent gene annotation |
Hypothetical conserved gene. (Os06t0189600-01);Protein of unknow n function DUF1677, Oryza sativa family protein. (Os06t0189600-0 3);Protein of unknown function DUF1677, Oryza sativa family prot ein. (Os06t0189600-04);Protein of unknown function DUF1677, Oryz a sativa family protein. (Os06t0189600-05) |
Parent gene strand | + |
Alternative splicing | Os06g0188700_circ_igg.1 Os06g0188700_circ_igg.2 Os06g0188700_circ_igg.3 Os06g0188875_circ_igg.1 Os06g0188875_circ_ag.1 Os06g0188875_circ_ag.2 Os06g0188875_circ_ag.3 Os06g0189600_circ_g.2 Os06g0189600_circ_g.3 Os06g0189600_circ_g.4 Os06g0189600_circ_g.5 |
Support reads | 20 |
Tissues | seed |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Os06t0189600-03:2 Os06t0189600-04:2 Os06t0189600-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 1.089898801 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |