Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d044648_circ_g.9 |
ID in PlantcircBase | zma_circ_007940 |
Alias | zma_circ_0001415 |
Organism | Zea mays |
Position | chr3: 233942295-233946661 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d044648 |
Parent gene annotation |
Alpha-L-arabinofuranosidase 1 |
Parent gene strand | - |
Alternative splicing | Zm00001d044648_circ_g.1 Zm00001d044648_circ_g.2 Zm00001d044648_circ_g.3 Zm00001d044648_circ_g.4 Zm00001d044648_circ_g.5 Zm00001d044648_circ_g.6 Zm00001d044648_circ_g.7 Zm00001d044648_circ_g.8 Zm00001d044648_circ_g.10 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d044648_T005:12 Zm00001d044648_T002:4 Zm00001d044648_T004:12 Zm00001d044648_T003:12 Zm00001d044648_T007:10 Zm00001d044648_T006:10 Zm00001d044648_T001:4 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.354853197 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ma et al., 2021b |