Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d044648_circ_g.2 |
| ID in PlantcircBase | zma_circ_001606 |
| Alias | circ1826 |
| Organism | Zea mays |
| Position | chr3: 233939887-233944170 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | ei-circRNA |
| Identification method | CIRCexplor2 |
| Parent gene | Zm00001d044648 |
| Parent gene annotation |
Alpha-L-arabinofuranosidase 1 |
| Parent gene strand | - |
| Alternative splicing | Zm00001d044648_circ_g.1 Zm00001d044648_circ_g.3 Zm00001d044648_circ_g.4 Zm00001d044648_circ_g.5 Zm00001d044648_circ_g.6 Zm00001d044648_circ_g.7 Zm00001d044648_circ_g.8 Zm00001d044648_circ_g.9 Zm00001d044648_circ_g.10 |
| Support reads | 2 |
| Tissues | seedling leaves |
| Exon boundary | No-Yes |
| Splicing signals | CT-AA |
| Number of exons covered | Zm00001d044648_T004:10 Zm00001d044648_T002:10 Zm00001d044648_T006:3 Zm00001d044648_T005:10 Zm00001d044648_T001:10 Zm00001d044648_T003:10 Zm00001d044648_T007:3 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.0422568 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chen et al., 2017b |