Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d039041_circ_g.1 |
ID in PlantcircBase | zma_circ_002417 |
Alias | circ2050 |
Organism | Zea mays |
Position | chr6: 169134173-169134811 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d039041 |
Parent gene annotation |
Putative DUF1296 domain containing family protein |
Parent gene strand | + |
Alternative splicing | Zm00001d039041_circ_g.2 Zm00001d039041_circ_g.3 |
Support reads | 4 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d039041_T006:2 Zm00001d039041_T002:2 Zm00001d039041_T004:2 Zm00001d039041_T009:2 Zm00001d039041_T005:2 Zm00001d039041_T003:2 Zm00001d039041_T008:2 Zm00001d039041_T007:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.138126056 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |