Plant Circular RNA Database

Detail information of Os06g0473200_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os06g0473200_circ_g.3
					
						ID in PlantcircBase
						osa_circ_030835
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr6: 15815478-15819382  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os06g0473200						
					
						Parent gene annotation
						
							Similar to NPK2. (Os06t0473200-01);Similar to Mitogen-activated 
protein kinase kinase 3. (Os06t0473200-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os06g0473200_circ_g.1 Os06g0473200_circ_g.2 Os06g0473200_circ_g.4 Os06g0473200_circ_g.5 Os06g0473200_circ_g.6 Os06g0473200_circ_g.7 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os06t0473200-01:6
Os06t0473200-02:6

General Information
CircRNA Name	Os06g0473200_circ_g.3
ID in PlantcircBase	osa_circ_030835
Alias	NA
Organism	Oryza sativa
Position	chr6: 15815478-15819382 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer
Parent gene	Os06g0473200
Parent gene annotation	Similar to NPK2. (Os06t0473200-01);Similar to Mitogen-activated protein kinase kinase 3. (Os06t0473200-02)
Parent gene strand	-
Alternative splicing	Os06g0473200_circ_g.1 Os06g0473200_circ_g.2 Os06g0473200_circ_g.4 Os06g0473200_circ_g.5 Os06g0473200_circ_g.6 Os06g0473200_circ_g.7
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os06t0473200-01:6 Os06t0473200-02:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACTCCTCTGGCCCAGTGCTTCGTTTATGAAAGCCATGCTCATTGATGTTATACTCACCCAATGA
TCTACTCAACAAATTCACAGTTCCACCATCAGAAACctctgctatttgctttaatctttctgtt
ggatcaacaatacttttgacataagctaccaagtccacggtagtgttttcatacctcttgatga
atgggtgt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 983
Transcript exons: 15815478-15815585,15815854-15815967,15816398-15816549,15
817587-15817724,15817835-15818053,15819131-15819382
CTCTGCTATTTGCTTTAATCTTTCTGTTGGATCAACAATACTTTTGACATAAGCTACCAAGTCC
ACGGTAGTGTTTTCATACCTCTTGATGAATGGGTGTGACAAAAGCTGCTCACACGAAGGCCTTG
CATCAGCGTCTTTTTGCAAGCAGTCATTGATGAACGAACAAAACTCAGATGAATAAGAATCTTT
TGGTGGTGTTGGTGATGGATCATCCAGAATCTGCAGCATGAGGTTGGCTGGGCCTTCATTCACA
TTATATGGAAATTTACCAGTAGCACACTCCAATATTGCTAGTCCAAGACTCCAAATATCAGCAG
CATAAGAGTAGTTCTCGTTACGAATTCTCTCAGGTGACATATATGTGACTGTGCCATGGCCATC
GTATTATCCAAACCAGCACTCACTCCAAAATCTGTTATCTTTGCCTCACCCTTGAGATTTACCA
GCAAATTTGCTGGCTTTATATCTCTATGCACTAGATGTCTTACTTCATGCAAGTAGCGCAAACC
GAGCAATACTTTCTGCAGCATATGTGCAAGAACTGGTTCTGGTATTGATTTCTTAATCTTTATA
ACATTAGCTAAGGACCCACCATCCATGTATTCAAGGGCGATGCTTATTTGTCCAGAATCAGGCA
TGTAGAATGCACCCTGGAATTCAACTAAACCAATATAACAACATGCTTCACATAATGTTCTCAT
CTCATTCAGAATTTGTTGTCTCTTCTCCTTCTCAAATATATTTATCTTCTTCAAGGCCAAAATT
CGATGAACTGGTATAAAAACAGCTCTCTGCACAACACTGCTTGCACCATTACCAATGGGGCCAA
ATATGTGCATATCATGAGAGGCACATCGGTATGCCTTTTCACCAGAATCTGACTCCTCTGGCCC
AGTGCTTCGTTTATGAAAGCCATGCTCATTGATGTTATACTCACCCAATGATCTACTCAACAAA
TTCACAGTTCCACCATCAGAAAC
						
					

						Genomic sequence
						
							CTCTGCTATTTGCTTTAATCTTTCTGTTGGATCAACAATACTTTTGACATAAGCTACCAAGTCC
ACGGTAGTGTTTTCATACCTCTTGATGAATGGGTGTGACAAAAGCTGCAAGATGTTAAATATTC
TTGTCAGCAAAAGGAAAAGAAAAGTGTATCACAATCCACAAAATTGTGTTGATATGGAAGATAT
ATTGACATAACATTGTGATTAGATCAAGCCATTACCAATCACAATTTATACTATGCTTATTATA
ACAACTAATGATACTCGAAAGAACCATGATACCTTATCACAAACGATATGCCTTTAATTCATAT
ATACAGAACTCAAACTTCTTGAAAATCAGCACATACATTACACAAAATCTCTTTACCTGCTCAC
ACGAAGGCCTTGCATCAGCGTCTTTTTGCAAGCAGTCATTGATGAACGAACAAAACTCAGATGA
ATAAGAATCTTTTGGTGGTGTTGGTGATGGATCATCCAGAATCTGAAATACTAAGTTTGTAAGG
AAACCAATGAATTGCACAAAAAACATTACAAAATGTTAAATAACTTGGCCTCCAGTGCCATGTG
ATGCTTTGTCTCTATTTTTACCTTGCTGGGTTCAAACAGGAATGCATTCAGGTTCTAAACTAAG
TCTATAAATTATCTGACTGTAAATATAATATTATTACATTAATACTATTGATCGTATGAGTGTC
GCAACTCGCAAGTTGTGACCACTTTCTTCCAAAACTTGCAGGAATGGAATATTCTTAACCATGT
ATCGAATCACAAAACCATCCAACCAAAAGGTGCAAACAGTGGTGAGTAGTCACAGTTGATCAAC
AATAGAAGAGGTCATATTGCATACTACCAAAATAAACAATAATTATAAACAAATAAATAAATAA
AAACTGGCCACGGAACCACATTACCTGCAGCATGAGGTTGGCTGGGCCTTCATTCACATTATAT
GGAAATTTACCAGTAGCACACTCCAATATTGCTAGTCCAAGACTCCAAATATCAGCAGCATAAG
AGTAGTTCTCGTTACGAATTCTCTCAGGTGACATATATGTGACTGTGCCTACAAAGGTAGCACA
CTGGAACATATTTATTTAGCAGAAAATATATCGTTGATTCAATCTAAATGATTTGACGTCATTG
AAGTACTATTCAAGAACAACTAGCATACAAGAAACATCAAAGATCATGCACACATGACACATCA
TATCCTGTCTGCAGAATGCCAAGTTTCATGATTCACTTGCTTATGTATATACTCCTTCCGTTCA
CAAATAGGTACTCCCTCCGTCCCAAAATAGAAGAACCTATGATCGGATGGGACATTTCCTACTA
CTACGAATCTGGACAGGCAGTCTGTCTAGATTCATAGTATTAGAAAATGTCCCATCCGTTTAGG
TTCTCATATTTTGGGACGGAGGGAGTATCATTTTAAGATTCACGCAGTCAAACCTTGAAAATAT
TAAATCAACAATATATGCAAAAGAATTAGGATTGGATATTAAAAATGATACCAGTAGACGCATC
ACGAAAAACGCTTACATGTAACTATATTTCCAATAATTTTTATAAATATATTATTAGAATAAGA
AATGATAAAACATCTGCATTGGAGACTGTGTCAATGTCCTAAATAACAAGTATAAAATAACAGA
GGAATTTTTTTTAGTCTTTAACTGTATTAGTTTTCAGTTTCTAATTTTTTAGCTCTGTTGGTCT
TATAGACCTTTGTTTCCCCCTCAGGCTTTGAAGGTCTTTGCACTTAATTAACGACTCCATCTGT
CCCAAAATGATGCTATTTCTCCACCTACCCCTTATCTCAACCAATCACAACCATTCTCCATTTG
ATTTCTTCACCTACTTTCTCTTCTCAACCAATCACAACCTTCCCCAAATCATTTCCACCTACTT
TGTTAATACCAATGCTCAATGCCAGAAATGCTTACGTTTTGGGACGGAGGTAGTACAGACTATA
GAGAATATTGTAATATATATTTATCAGCAGGGTCCTCCCTACTATTTCCCTTTAAACAATCAAA
TTGGCATATAAGGAACACAAAAATAAAACTGTGAAGATTGTAACCAAGAGAAGTAGCATACCAT
GGCCATCGTATTATCCAAACCAGCACTCACTCCAAAATCTGTTATCTTTGCCTCACCCTTGAGA
TTTACCAGCAAATTTGCTGGCTTTATATCTCTATGCACTAGATGTCTTACTTCATGCAAGTAGC
GCAAACCCTGTAGAATTGTACAACAGAACAAATTATATAGTTTAAAAGGTTGATCAACCAGCCT
GAGTTATACTAACAATAACATAGAAATGAAGGGCAGATGTGAAAGATCCATACGAGCAATACTT
TCTGCAGCATATGTGCAAGAACTGGTTCTGGTATTGATTTCTTAATCTTTATAACATTAGCTAA
GGACCCACCATCCATGTATTCAAGGGCGATGCTTATTTGTCCAGAATCAGGCATGTAGAATGCA
CCCTGGAATTCAACTAAACCAATATAACAACATGCTTCACATAATGTTCTCATCTCATTCAGAA
TTTGTTGTCTCTTCTCCTGCGAAAGGCATCAAGAAACATAGGAAGTATGGTGACTTAGATTACT
CATTGCAATAAAATAGACGAATTGCATGAATCAAATGAGTCGATCAATATAAGGTACAAAGATT
ACTGCATGCAATACCAAATGAGTTTTGTATCATGAGAAGATAAATTATGAACTAATCCCTCGGT
TTTAAATTTTTGCCAGTACGCGTACTTGGGAGAGTCAAATTTCAAGTGATTTAAATTTGAATTG
GATCTTATTTGCTACAAAAGATAAATGTTATAAAAAAAGGAATTTAGAAATTGTGTCATCTAGG
CATTTACCAGAAGGGATAAAGGATAGAAGAAAAAAGAAAGATTATGTATTCTTTAGTATTTCCA
ATTTTATGCTACAAATAGAAATGAACCTTCTACTCCAGTGTCACTCAAACTAAATAGAAATCCA
TCTACAAATGTCAGTTCATATTGGAACTTGGAAGTACTCAGCTTCAACATCTCTCACTCCAGCT
GGCCCCAAATATTAGGTGTGGCAAGGACATTTAATCATAATGAAAGTCGATAAGGGAAAAAAAT
AAGTACTATGAGAAGGACAGAATACTCCATCATGCAAATAGAAAATATGGATGAATATATGGTT
TAGTTTGCTTCATTGGAAACAGCTTATGCCAAAGTATAAATAAAGTATGTGGTTAGAAGGAATC
AGATTAGACTTTACTTGTCTTGCATTTTTAAAGTAGGGCCCAAGATGAATCTAAAAATAGACAT
AGTGATGCTAAAAAAATATTAATCTTGACTTACAGAGTAGCACCCCAAGATGAATCTAGAAATG
GATATAATGGTGCTAACGGCTAAGAAAACAAGCAGTAGCTAAAACATTAATAACTCAGCTAGAC
AAGTTCCACTAAATTATTGGCATGAACATTTATAAGTCTAGTTTCTAAGTCTTCTATGTGCAGA
TTTGCTCAGATAAAGTACTGTAAATTACATACTGAGAAAAAAACCATTTGATTCACATGGAATT
ATTTTTTGAAAAGTGGAAATAGCTGATCATAATCTGCCTTTTGTACAATTAAGGAACAAAGATA
TGAACCTTCTCAAATATATTTATCTTCTTCAAGGCCAAAATTCGATGAACTGGTATAAAAACAG
CTCTCTGCACAACACTGCTTGCACCATTACCAATGGGGCCAAATATGTGCATATCATGAGAGGC
ACATCGGTATGCCTTTTCACCAGAATCTGACTCCTCTGGCCCAGTGCTTCGTTTATGAAAGCCA
TGCTCATTGATGTTATACTCACCCAATGATCTACTCAACAAATTCACAGTTCCACCATCAGAAA
C
						
					

			
		

Sequences
Splice junction sequence	ACTCCTCTGGCCCAGTGCTTCGTTTATGAAAGCCATGCTCATTGATGTTATACTCACCCAATGA TCTACTCAACAAATTCACAGTTCCACCATCAGAAACctctgctatttgctttaatctttctgtt ggatcaacaatacttttgacataagctaccaagtccacggtagtgttttcatacctcttgatga atgggtgt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 983 Transcript exons: 15815478-15815585,15815854-15815967,15816398-15816549,15 817587-15817724,15817835-15818053,15819131-15819382 CTCTGCTATTTGCTTTAATCTTTCTGTTGGATCAACAATACTTTTGACATAAGCTACCAAGTCC ACGGTAGTGTTTTCATACCTCTTGATGAATGGGTGTGACAAAAGCTGCTCACACGAAGGCCTTG CATCAGCGTCTTTTTGCAAGCAGTCATTGATGAACGAACAAAACTCAGATGAATAAGAATCTTT TGGTGGTGTTGGTGATGGATCATCCAGAATCTGCAGCATGAGGTTGGCTGGGCCTTCATTCACA TTATATGGAAATTTACCAGTAGCACACTCCAATATTGCTAGTCCAAGACTCCAAATATCAGCAG CATAAGAGTAGTTCTCGTTACGAATTCTCTCAGGTGACATATATGTGACTGTGCCATGGCCATC GTATTATCCAAACCAGCACTCACTCCAAAATCTGTTATCTTTGCCTCACCCTTGAGATTTACCA GCAAATTTGCTGGCTTTATATCTCTATGCACTAGATGTCTTACTTCATGCAAGTAGCGCAAACC GAGCAATACTTTCTGCAGCATATGTGCAAGAACTGGTTCTGGTATTGATTTCTTAATCTTTATA ACATTAGCTAAGGACCCACCATCCATGTATTCAAGGGCGATGCTTATTTGTCCAGAATCAGGCA TGTAGAATGCACCCTGGAATTCAACTAAACCAATATAACAACATGCTTCACATAATGTTCTCAT CTCATTCAGAATTTGTTGTCTCTTCTCCTTCTCAAATATATTTATCTTCTTCAAGGCCAAAATT CGATGAACTGGTATAAAAACAGCTCTCTGCACAACACTGCTTGCACCATTACCAATGGGGCCAA ATATGTGCATATCATGAGAGGCACATCGGTATGCCTTTTCACCAGAATCTGACTCCTCTGGCCC AGTGCTTCGTTTATGAAAGCCATGCTCATTGATGTTATACTCACCCAATGATCTACTCAACAAA TTCACAGTTCCACCATCAGAAAC
Genomic sequence	CTCTGCTATTTGCTTTAATCTTTCTGTTGGATCAACAATACTTTTGACATAAGCTACCAAGTCC ACGGTAGTGTTTTCATACCTCTTGATGAATGGGTGTGACAAAAGCTGCAAGATGTTAAATATTC TTGTCAGCAAAAGGAAAAGAAAAGTGTATCACAATCCACAAAATTGTGTTGATATGGAAGATAT ATTGACATAACATTGTGATTAGATCAAGCCATTACCAATCACAATTTATACTATGCTTATTATA ACAACTAATGATACTCGAAAGAACCATGATACCTTATCACAAACGATATGCCTTTAATTCATAT ATACAGAACTCAAACTTCTTGAAAATCAGCACATACATTACACAAAATCTCTTTACCTGCTCAC ACGAAGGCCTTGCATCAGCGTCTTTTTGCAAGCAGTCATTGATGAACGAACAAAACTCAGATGA ATAAGAATCTTTTGGTGGTGTTGGTGATGGATCATCCAGAATCTGAAATACTAAGTTTGTAAGG AAACCAATGAATTGCACAAAAAACATTACAAAATGTTAAATAACTTGGCCTCCAGTGCCATGTG ATGCTTTGTCTCTATTTTTACCTTGCTGGGTTCAAACAGGAATGCATTCAGGTTCTAAACTAAG TCTATAAATTATCTGACTGTAAATATAATATTATTACATTAATACTATTGATCGTATGAGTGTC GCAACTCGCAAGTTGTGACCACTTTCTTCCAAAACTTGCAGGAATGGAATATTCTTAACCATGT ATCGAATCACAAAACCATCCAACCAAAAGGTGCAAACAGTGGTGAGTAGTCACAGTTGATCAAC AATAGAAGAGGTCATATTGCATACTACCAAAATAAACAATAATTATAAACAAATAAATAAATAA AAACTGGCCACGGAACCACATTACCTGCAGCATGAGGTTGGCTGGGCCTTCATTCACATTATAT GGAAATTTACCAGTAGCACACTCCAATATTGCTAGTCCAAGACTCCAAATATCAGCAGCATAAG AGTAGTTCTCGTTACGAATTCTCTCAGGTGACATATATGTGACTGTGCCTACAAAGGTAGCACA CTGGAACATATTTATTTAGCAGAAAATATATCGTTGATTCAATCTAAATGATTTGACGTCATTG AAGTACTATTCAAGAACAACTAGCATACAAGAAACATCAAAGATCATGCACACATGACACATCA TATCCTGTCTGCAGAATGCCAAGTTTCATGATTCACTTGCTTATGTATATACTCCTTCCGTTCA CAAATAGGTACTCCCTCCGTCCCAAAATAGAAGAACCTATGATCGGATGGGACATTTCCTACTA CTACGAATCTGGACAGGCAGTCTGTCTAGATTCATAGTATTAGAAAATGTCCCATCCGTTTAGG TTCTCATATTTTGGGACGGAGGGAGTATCATTTTAAGATTCACGCAGTCAAACCTTGAAAATAT TAAATCAACAATATATGCAAAAGAATTAGGATTGGATATTAAAAATGATACCAGTAGACGCATC ACGAAAAACGCTTACATGTAACTATATTTCCAATAATTTTTATAAATATATTATTAGAATAAGA AATGATAAAACATCTGCATTGGAGACTGTGTCAATGTCCTAAATAACAAGTATAAAATAACAGA GGAATTTTTTTTAGTCTTTAACTGTATTAGTTTTCAGTTTCTAATTTTTTAGCTCTGTTGGTCT TATAGACCTTTGTTTCCCCCTCAGGCTTTGAAGGTCTTTGCACTTAATTAACGACTCCATCTGT CCCAAAATGATGCTATTTCTCCACCTACCCCTTATCTCAACCAATCACAACCATTCTCCATTTG ATTTCTTCACCTACTTTCTCTTCTCAACCAATCACAACCTTCCCCAAATCATTTCCACCTACTT TGTTAATACCAATGCTCAATGCCAGAAATGCTTACGTTTTGGGACGGAGGTAGTACAGACTATA GAGAATATTGTAATATATATTTATCAGCAGGGTCCTCCCTACTATTTCCCTTTAAACAATCAAA TTGGCATATAAGGAACACAAAAATAAAACTGTGAAGATTGTAACCAAGAGAAGTAGCATACCAT GGCCATCGTATTATCCAAACCAGCACTCACTCCAAAATCTGTTATCTTTGCCTCACCCTTGAGA TTTACCAGCAAATTTGCTGGCTTTATATCTCTATGCACTAGATGTCTTACTTCATGCAAGTAGC GCAAACCCTGTAGAATTGTACAACAGAACAAATTATATAGTTTAAAAGGTTGATCAACCAGCCT GAGTTATACTAACAATAACATAGAAATGAAGGGCAGATGTGAAAGATCCATACGAGCAATACTT TCTGCAGCATATGTGCAAGAACTGGTTCTGGTATTGATTTCTTAATCTTTATAACATTAGCTAA GGACCCACCATCCATGTATTCAAGGGCGATGCTTATTTGTCCAGAATCAGGCATGTAGAATGCA CCCTGGAATTCAACTAAACCAATATAACAACATGCTTCACATAATGTTCTCATCTCATTCAGAA TTTGTTGTCTCTTCTCCTGCGAAAGGCATCAAGAAACATAGGAAGTATGGTGACTTAGATTACT CATTGCAATAAAATAGACGAATTGCATGAATCAAATGAGTCGATCAATATAAGGTACAAAGATT ACTGCATGCAATACCAAATGAGTTTTGTATCATGAGAAGATAAATTATGAACTAATCCCTCGGT TTTAAATTTTTGCCAGTACGCGTACTTGGGAGAGTCAAATTTCAAGTGATTTAAATTTGAATTG GATCTTATTTGCTACAAAAGATAAATGTTATAAAAAAAGGAATTTAGAAATTGTGTCATCTAGG CATTTACCAGAAGGGATAAAGGATAGAAGAAAAAAGAAAGATTATGTATTCTTTAGTATTTCCA ATTTTATGCTACAAATAGAAATGAACCTTCTACTCCAGTGTCACTCAAACTAAATAGAAATCCA TCTACAAATGTCAGTTCATATTGGAACTTGGAAGTACTCAGCTTCAACATCTCTCACTCCAGCT GGCCCCAAATATTAGGTGTGGCAAGGACATTTAATCATAATGAAAGTCGATAAGGGAAAAAAAT AAGTACTATGAGAAGGACAGAATACTCCATCATGCAAATAGAAAATATGGATGAATATATGGTT TAGTTTGCTTCATTGGAAACAGCTTATGCCAAAGTATAAATAAAGTATGTGGTTAGAAGGAATC AGATTAGACTTTACTTGTCTTGCATTTTTAAAGTAGGGCCCAAGATGAATCTAAAAATAGACAT AGTGATGCTAAAAAAATATTAATCTTGACTTACAGAGTAGCACCCCAAGATGAATCTAGAAATG GATATAATGGTGCTAACGGCTAAGAAAACAAGCAGTAGCTAAAACATTAATAACTCAGCTAGAC AAGTTCCACTAAATTATTGGCATGAACATTTATAAGTCTAGTTTCTAAGTCTTCTATGTGCAGA TTTGCTCAGATAAAGTACTGTAAATTACATACTGAGAAAAAAACCATTTGATTCACATGGAATT ATTTTTTGAAAAGTGGAAATAGCTGATCATAATCTGCCTTTTGTACAATTAAGGAACAAAGATA TGAACCTTCTCAAATATATTTATCTTCTTCAAGGCCAAAATTCGATGAACTGGTATAAAAACAG CTCTCTGCACAACACTGCTTGCACCATTACCAATGGGGCCAAATATGTGCATATCATGAGAGGC ACATCGGTATGCCTTTTCACCAGAATCTGACTCCTCTGGCCCAGTGCTTCGTTTATGAAAGCCA TGCTCATTGATGTTATACTCACCCAATGATCTACTCAACAAATTCACAGTTCCACCATCAGAAA C

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_006726* osi_circ_016185 						
					
						PMCS
						0.217726293

Conservation Information
Conserved circRNAs	osi_circ_006726* osi_circ_016185
PMCS	0.217726293

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							15819328-15815526(+)
15819344-15815521(+)
15816537-15816471(-)
						
						Potential amino acid sequence
						
							MLYSPNDLLNKFTVPPSETSAICFNLSVGSTILLT*(+)
MIYSTNSQFHHQKPLLFALIFLLDQQYF*(+)
MSPERIRNENYSYAADIWSLGLAILECATGKFPYNVNEGPANLMLQILDDPSPTPPKDSYSSEF
CSFINDCLQKDADARPSCEQLLSHPFIKRYENTTVDLVAYVKSIVDPTERLKQIAEVSDGGTVN
LLSRSLGEYNINEHGFHKRSTGPEESDSGEKAYRCASHDMHIFGPIGNGASSVVQRAVFIPVHR
ILALKKINIFEKEKRQQILNEMRTLCEACCYIGLVEFQGAFYMPDSGQISIALEYMDGGSLANV
IKIKKSIPEPVLAHMLQKVLLGLRYLHEVRHLVHRDIKPANLLVNLKGEAKITDFGVSAGLDNT
MAMAQSHICHLREFVTRTTLMLLIFGVLD*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	15819328-15815526(+) 15819344-15815521(+) 15816537-15816471(-)
Potential amino acid sequence	MLYSPNDLLNKFTVPPSETSAICFNLSVGSTILLT(+) MIYSTNSQFHHQKPLLFALIFLLDQQYF(+) MSPERIRNENYSYAADIWSLGLAILECATGKFPYNVNEGPANLMLQILDDPSPTPPKDSYSSEF CSFINDCLQKDADARPSCEQLLSHPFIKRYENTTVDLVAYVKSIVDPTERLKQIAEVSDGGTVN LLSRSLGEYNINEHGFHKRSTGPEESDSGEKAYRCASHDMHIFGPIGNGASSVVQRAVFIPVHR ILALKKINIFEKEKRQQILNEMRTLCEACCYIGLVEFQGAFYMPDSGQISIALEYMDGGSLANV IKIKKSIPEPVLAHMLQKVLLGLRYLHEVRHLVHRDIKPANLLVNLKGEAKITDFGVSAGLDNT MAMAQSHICHLREFVTRTTLMLLIFGVLD*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os06g0473200_circ_g.3

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