Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d011622_circ_g.1 |
ID in PlantcircBase | zma_circ_002833 |
Alias | circ2781 |
Organism | Zea mays |
Position | chr8: 156366129-156366521 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d011622 |
Parent gene annotation |
Putative zinc finger protein |
Parent gene strand | - |
Alternative splicing | Zm00001d011622_circ_g.2 |
Support reads | 112 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d011622_T006:2 Zm00001d011622_T030:2 Zm00001d011622_T035:2 Zm00001d011622_T038:1 Zm00001d011622_T016:2 Zm00001d011622_T025:2 Zm00001d011622_T020:2 Zm00001d011622_T002:2 Zm00001d011622_T004:2 Zm00001d011622_T012:2 Zm00001d011622_T023:2 Zm00001d011622_T028:2 Zm00001d011622_T003:2 Zm00001d011622_T021:2 Zm00001d011622_T018:2 Zm00001d011622_T013:2 Zm00001d011622_T026:2 Zm00001d011622_T031:2 Zm00001d011622_T008:2 Zm00001d011622_T009:2 Zm00001d011622_T001:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.219917286 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chen et al., 2017b |