Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d019947_circ_g.8 |
ID in PlantcircBase | zma_circ_002510 |
Alias | circ1177 |
Organism | Zea mays |
Position | chr7: 78831012-78848783 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d019947 |
Parent gene annotation |
hydrolases acting on ester bonds |
Parent gene strand | + |
Alternative splicing | Zm00001d019947_circ_g.2 Zm00001d019947_circ_g.3 Zm00001d019947_circ_g.4 Zm00001d019947_circ_g.5 Zm00001d019947_circ_g.6 Zm00001d019947_circ_g.7 Zm00001d019947_circ_g.9 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-TA |
Number of exons covered | Zm00001d019947_T017:5 Zm00001d019947_T022:6 Zm00001d019947_T007:5 Zm00001d019947_T024:4 Zm00001d019947_T010:5 Zm00001d019947_T040:4 Zm00001d019947_T014:5 Zm00001d019947_T035:5 Zm00001d019947_T013:5 Zm00001d019947_T033:6 Zm00001d019947_T004:5 Zm00001d019947_T025:5 Zm00001d019947_T023:6 Zm00001d019947_T032:5 Zm00001d019947_T028:6 Zm00001d019947_T037:5 Zm00001d019947_T006:4 Zm00001d019947_T015:4 Zm00001d019947_T019:5 Zm00001d019947_T002:3 Zm00001d019947_T016:6 Zm00001d019947_T041:5 Zm00001d019947_T012:5 Zm00001d019947_T030:6 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.002292902 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |