Plant Circular RNA Database

Detail information of 4_circ_ag.3

			
						 General Information
					
						CircRNA Name
						4_circ_ag.3
					
						ID in PlantcircBase
						ath_circ_030460
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 7124096-7131207  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							ag-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							NA						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						NA
					
						Alternative splicing
						
							4_circ_ag.8 4_circ_ag.9 AT4G11830_circ_g.1 4_circ_ag.2 4_circ_ag.3 4_circ_ag.4 4_circ_ag.5 4_circ_ag.6 4_circ_ag.7 4_circ_ag.8 4_circ_ag.9 4_circ_ag.10 4_circ_ag.11 4_circ_ag.12 4_circ_ag.13 4_circ_ag.14 4_circ_ag.15 4_circ_ag.16 4_circ_ag.17 4_circ_ag.18 4_circ_ag.19 4_circ_ag.20 4_circ_ag.21 4_circ_ag.22 4_circ_ag.23 4_circ_ag.24 4_circ_ag.25 4_circ_ag.26 4_circ_ag.27 4_circ_ag.28 AT4G11840_circ_g.1 4_circ_ag.2 4_circ_ag.4 4_circ_ag.5 4_circ_ag.6 AT4G11845_circ_g.1 4_circ_ag.2 AT4G11845_circ_g.3 AT4G11850_circ_g.1 AT4G11850_circ_g.2 						
					
						Support reads
						15
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						NA

General Information
CircRNA Name	4_circ_ag.3
ID in PlantcircBase	ath_circ_030460
Alias	NA
Organism	Arabidpsis thaliana
Position	chr4: 7124096-7131207 JBrowse»
Reference genome	TAIR10.38
Type	ag-circRNA
Identification method	CIRI
Parent gene	NA
Parent gene annotation	NA
Parent gene strand	NA
Alternative splicing	4_circ_ag.8 4_circ_ag.9 AT4G11830_circ_g.1 4_circ_ag.2 4_circ_ag.3 4_circ_ag.4 4_circ_ag.5 4_circ_ag.6 4_circ_ag.7 4_circ_ag.8 4_circ_ag.9 4_circ_ag.10 4_circ_ag.11 4_circ_ag.12 4_circ_ag.13 4_circ_ag.14 4_circ_ag.15 4_circ_ag.16 4_circ_ag.17 4_circ_ag.18 4_circ_ag.19 4_circ_ag.20 4_circ_ag.21 4_circ_ag.22 4_circ_ag.23 4_circ_ag.24 4_circ_ag.25 4_circ_ag.26 4_circ_ag.27 4_circ_ag.28 AT4G11840_circ_g.1 4_circ_ag.2 4_circ_ag.4 4_circ_ag.5 4_circ_ag.6 AT4G11845_circ_g.1 4_circ_ag.2 AT4G11845_circ_g.3 AT4G11850_circ_g.1 AT4G11850_circ_g.2
Support reads	15
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	NA

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGCGTTCCTCGAAATTAGCAAGTACATCATATGCAGCTGGACCATCAATCTTGCTGTGAAGATC
ATGCCATGGTTCTCTTGGTCCATCATCCGCAGTAGTcacaaaatttgggttatggaagtcatct
ttatggattgtctttaatgtcctgaagagaggatgcttgggagtatcaaatcgtccgttgcaca
agtctagc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1227
Transcript exons: 7124096-7124290,7124380-7124463,7129448-7129648,7129774-
7129807,7130098-7130257,7130334-7130483,7130559-7130708,
7130784-7130854,7130957-7131034,7131104-7131207
CACAAAATTTGGGTTATGGAAGTCATCTTTATGGATTGTCTTTAATGTCCTGAAGAGAGGATGC
TTGGGAGTATCAAATCGTCCGTTGCACAAGTCTAGCCCTCCAACAAATGCTACAATCTTTCTTC
GGTTCTGAGCTGCTTCAGCATCTACAATCATAGTTTTCTGATGATGCGTGTAGATTGTTTCAAC
TTCCAGATTTTTTTATGAAGCTGTGACCTTTCCCTCCATATCTAGGACAAAGGAGAACTTGCAC
CGATGAGTGCTTGAAAAAACGGCGCCTGTTCTATCAACTTGAACTGGATACTTAAGAAGATGAC
CTGACATCTCTGTGACTTCCTCTGCTGCATACTGTCTCCAATTCAGCTCACTCAATTGCCTTAC
TCGTCTCACGCATTCCATGTTCTCTGGTTCCTCGAAACCTTGCTCTAGAAACCCTAGATGTTCT
GCCCATAACGACATTCTATACCCAAAGATCTGCTGACCATGAGGACGAGAACCTTTCATAGCCC
ATCCGAGGACTATTATATACGCTAACTGTTCCAACAGGAACTTCTCTGGTTCCAAGACAGAAAA
AGTTCAAAAAGTCTTGTGGCTCAAACTGGCTATCAAGACCAACTTCCACAAGTGCCTTGTAGAT
GGTTTGATACATCATTTGCATTGTCTTGTGCTGCCTGCCAGTAGAGAATTCTTTGAATAGGGTT
ACTTGTTGGAGCACCTTCTGGCCACATTGGAATGACAATATAAGCAGCAAACTTCTCCCTTGCT
CTAATTTTGTTAGCAATCTTAAGCGCGATTTCCATCGGGATTAGATTATTAGCACCACCCAAGT
CCTTGTTTGAATCCCAGTTGAATGAAGATCCAAGAAAATATTGGTTCTCAATGTAAATGAAGTG
CTGAGCAGATCGTATGGCCTTAACATAAGCTGCGTGTATGCTCATATCTATGAGAATATTCTTC
CCACATAGAAGATTTCTTCCAGTAGCTTCCTTTGGGTCCTTTGGAAACCCTTTGACTGAACTTG
AATCAATGGAACGGAAAACCTACCTGAACATGCCAAGACTCTGGATCATTATCATTAGCAGAAG
AAGCTTCAGAAAGTCCCACGATGTCAGGAATTCTGATCCAGCGTTCCTCGAAATTAGCAAGTAC
ATCATATGCAGCTGGACCATCAATCTTGCTGTGAAGATCATGCCATGGTTCTCTTGGTCCATCA
TCCGCAGTAGT
Transcript length: 1711
Transcript exons: 7124096-7124244,7124380-7124498,7124899-7125010,7125210-
7125247,7125335-7125457,7129429-7129649,7129774-7129805,
7129848-7129973,7130091-7130257,7130334-7130484,7130558-
7130708,7130784-7130854,7130957-7131207
CACAAAATTTGGGTTATGGAAGTCATCTTTATGGATTGTCTTTAATGTCCTGAAGAGAGGATGC
TTGGGAGTATCAAATCGTCCGTTGCACAAGTCTAGCCCTCCAACAAATGCTACAATCTTTCTTC
GGTTCTGAGCTGCTTCAGCATCAGATTTTTTTATGAAGCTGTGACCTTTCCCTCCATATCTAGG
ACAAAGGAGAACTTGCACCGATGAGTGCTTGAAAAAACGGCGAGTCTCCTCATCGCTTGTGTTC
ATAAGTCCTTTCTGTACTGAATCCCAAAAGACTCCTTGAAGTTGGATCATCCCACACCAAAACC
AACACTCTAACACCTTCTTGAGATTTGACTTTAAGCAACTCTCCTAATGTACCTTGGGTCCGCC
TTTCCTTAAAGGGAAGTATGTACCGGGAACTCCTCCTTGTTTACAAGGCTTTCCTCTACTGTTA
AGTATCGGAAACAGCCCTTCGATTCTATTCCCGGAACACAACTGCTCGGTTGGGATTTCAACAG
CTCCAATGATCTGTGATCCAATAATATCACAGGAAGAGAACTCACTTTGCCTGTTCTATCAACT
TGAACTGGATACTTAAGAAGATGACCTGACATCTCTGTGACTTCCTCTGCTGCATACTGTCTCC
AATTCAGCTCACTCAATTGCCTTACTCGTCTCACGCATTCCATGTTCTCTGGTTCCTCGAAACC
TTGCTCTAGAAACCCTAGATGTTCTGCCCATAACGACATTCTATACCCAAAGATCTGCCTGACC
ATGAGGACGAGAACCTTTCATAGCCCCTCTAGTTCCTTCCAAGGATCTCTGGTTGATATTCGCG
GAACCAATTAAGACAAACTCATCATCCACTACCATACCTTTGGAATGAACATATATCATGAATC
TTCGACTCTTCAAAGCTTGTACCTGTGGCTTCCGAGGACTATTATATACGCTAACTGTTCCAAC
AGGAACTTCTCTGGTTCCAAGACAGAAAAAGTTCAAAAAGTCTTGTGGCTCAAACTGGCTATCA
AGACCAACTTCCACAAGTGCCTTGTAGATGGTTTGATACATCATTTGCATTGTCTTGTGCTGCC
TGCCAGTAGAGAATTCTTTGAATAGGGTTACTTGTTGGAGCACCTTCTGGCCACATTGGAATGA
CAATATAAGCAGCAAACTTCTCCCTTGCTCTAATTTTGTTAGCAATCTTAAGCGCGATTTCCAT
CGGGATTAGATTATTAGCACCTTACCCAAGTCCTTGTTTGAATCCCAGTTGAATGAAGATCCAA
GAAAATATTGGTTCTCAATGTAAATGAAGTGCTGAGCAGATCGTATGGCCTTAACATAAGCTGC
GTGTATGCTCATATCTATGAGAATATTCTTCCCACATAGAAGATTTCTTCCAGTAGCTTCCTTT
GGGTCCTTTGGAAACCCTTTGACTGAACTTGAATCAATGGAACGGAAAACCTACCTGAACATGC
CAAGACTCTGGATCATTATCATTAGCAGAAGAAGCTTCAGAAAGTCCCACGATGTCAGGAATTC
TGTCTATCCTAAGCAAAGAATCATCAGAAGAAGATTTTAGTTTCCCAATTCCGCGAGGTTTTGA
AGCCTTCATCCAGCGTTCCTCGAAATTAGCAAGTACATCATATGCAGCTGGACCATCAATCTTG
CTGTGAAGATCATGCCATGGTTCTCTTGGTCCATCATCCGCAGTAGT
Transcript length: 1750
Transcript exons: 7124096-7124284,7124380-7124498,7124899-7125081,7125112-
7125247,7125335-7125431,7129448-7129648,7129774-7129914,
7130055-7130257,7130333-7130483,7130558-7130708,7130784-
7130830,7131076-7131207
CACAAAATTTGGGTTATGGAAGTCATCTTTATGGATTGTCTTTAATGTCCTGAAGAGAGGATGC
TTGGGAGTATCAAATCGTCCGTTGCACAAGTCTAGCCCTCCAACAAATGCTACAATCTTTCTTC
GGTTCTGAGCTGCTTCAGCATCTACAATCATAGTTTTCTGATGATGCGTGTAGATTGTTTCCAG
ATTTTTTTATGAAGCTGTGACCTTTCCCTCCATATCTAGGACAAAGGAGAACTTGCACCGATGA
GTGCTTGAAAAAACGGCGAGTCTCCTCATCGCTTGTGTTCATAAGTCCTTTCTGTACTGAATCC
CAAAAGACTCCTTGAAGTTGGATCATCCCACACCAAAACCAACACTCTAACACCTTCTTGAGAT
TTGACTTTAAGCAACTCTCCTAATGTACCTTGGGTCGGATCATTGTTACGACGAACCAGCCTAA
CCGGATGGAAAACTGACCAACCTGTGATATAAATCAACCTCCTCCAGCATTTTCCATGTCTATA
CTGAATCCCACCATCAAGATGTACACTCGGAAGAGTACCGTCATCAACATGAGCATCCTGATAA
AGAGTAACCCTACCGCCTTTCCTTAAAGGGAAGTATGTACCGGGAACTCCTCCTTGTTTACAAG
GCTTTCCTCTACTGTTAAGTATCGGAAACAGCCCTTCGATTCTATTCCCGGAACACAACTGCTC
GGTTGGGATTTCAACAGCTCGCCTGTTCTATCAACTTGAACTGGATACTTAAGAAGATGACCTG
ACATCTCTGTGACTTCCTCTGCTGCATACTGTCTCCAATTCAGCTCACTCAATTGCCTTACTCG
TCTCACGCATTCCATGTTCTCTGGTTCCTCGAAACCTTGCTCTAGAAACCCTAGATGTTCTGCC
CATAACGACATTCTATACCCAAAGATCTGCTGACCATGAGGACGAGAACCTTTCATAGCCCATG
AATAGTGTGGCTGATACCCTCCCATGGCGATTTCAGTATCTCTAGTTCCTTCCAAGGATCTCTG
GTTGATATTCGCGGAACCAATTAAGACAAACTCATCATCCACATACCTGTGCAGCATTTGCATT
TGCGTTTGGCTGAGGTGGCTTCCGAGGACTATTATATACGCTAACTGTTCCAACAGGAACTTCT
CTGGTTCCAAGACAGAAAAAGTTCAAAAAGTCTTGTGGCTCAAACTGGCTATCAAGACCAACTT
CCACAAGTGCCTTGTAGATGGTTTGATACATCATTTGCATTGTCTTGTGCTGCCCTGCCAGTAG
AGAATTCTTTGAATAGGGTTACTTGTTGGAGCACCTTCTGGCCACATTGGAATGACAATATAAG
CAGCAAACTTCTCCCTTGCTCTAATTTTGTTAGCAATCTTAAGCGCGATTTCCATCGGGATTAG
ATTATTAGCACCTACCCAAGTCCTTGTTTGAATCCCAGTTGAATGAAGATCCAAGAAAATATTG
GTTCTCAATGTAAATGAAGTGCTGAGCAGATCGTATGGCCTTAACATAAGCTGCGTGTATGCTC
ATATCTATGAGAATATTCTTCCCACATAGAAGATTTCTTCCAGTAGCTTCCTTTGGGTCCTTTG
GAAACCCTTTGACTGAACCCCAATTCCGCGAGGTTTTGAAGCCTTCATCCAGCGTTCCTCGAAA
TTAGCAAGTACATCATATGCAGCTGGACCATCAATCTTGCTGTGAAGATCATGCCATGGTTCTC
TTGGTCCATCATCCGCAGTAGT
Transcript length: 1911
Transcript exons: 7124096-7124272,7124380-7124497,7124898-7125034,7125084-
7125247,7125335-7125460,7129448-7129649,7129774-7129810,
7129828-7129973,7130076-7130257,7130334-7130483,7130559-
7130708,7130784-7130854,7130957-7131207
CACAAAATTTGGGTTATGGAAGTCATCTTTATGGATTGTCTTTAATGTCCTGAAGAGAGGATGC
TTGGGAGTATCAAATCGTCCGTTGCACAAGTCTAGCCCTCCAACAAATGCTACAATCTTTCTTC
GGTTCTGAGCTGCTTCAGCATCTACAATCATAGTTTTCTGATGATGCGTCAGATTTTTTTATGA
AGCTGTGACCTTTCCCTCCATATCTAGGACAAAGGAGAACTTGCACCGATGAGTGCTTGAAAAA
ACGGCGAGTCTCCTCATCGCTTGTGTTCATAAGTCCTTTCTGTACTGAATCCCAAAAGACTCCT
TGAAGTTGGATCATCCCACACCAAAACCAACACTCTAACACCTTCTTGAGATTTGACTTTAAGC
AACTCTCCTAATGTACCTTGGGTCGGATCATTGTTACGACGAACCAGCCCCGTCGTATCGCATC
AGCCATATCTTCCCAGCATTTTCCATGTCTATACTGAATCCCACCATCAAGATGTACACTCGGA
AGAGTACCGTCATCAACATGAGCATCCTGATAAAGAGTAACCCTACCGCCTTTCCTTAAAGGGA
AGTATGTACCGGGAACTCCTCCTTGTTTACAAGGCTTTCCTCTACTGTTAAGTATCGGAAACAG
CCCTTCGATTCTATTCCCGGAACACAACTGCTCGGTTGGGATTTCAACAGCTCCAATGATCTGT
GATCCAATAATATCACTGGCCTGTTCTATCAACTTGAACTGGATACTTAAGAAGATGACCTGAC
ATCTCTGTGACTTCCTCTGCTGCATACTGTCTCCAATTCAGCTCACTCAATTGCCTTACTCGTC
TCACGCATTCCATGTTCTCTGGTTCCTCGAAACCTTGCTCTAGAAACCCTAGATGTTCTGCCCA
TAACGACATTCTATACCCAAAGATCTGCCTGACCATGAGGACGAGAACCTTTCATAGCCCATGA
ATCCCATGGCGATTTCAGTATCTCTAGTTCCTTCCAAGGATCTCTGGTTGATATTCGCGGAACC
AATTAAGACAAACTCATCATCCACTACCATACCTTTGGAATGAACATATATCATGAATCTTCGA
CTCTTCAAAGCTTGTACCTTTGCGTTTGGCTGAGGTGGCTTCCGAGGACTATTATATACGCTAA
CTGTTCCAACAGGAACTTCTCTGGTTCCAAGACAGAAAAAGTTCAAAAAGTCTTGTGGCTCAAA
CTGGCTATCAAGACCAACTTCCACAAGTGCCTTGTAGATGGTTTGATACATCATTTGCATTGTC
TTGTGCTGCCTGCCAGTAGAGAATTCTTTGAATAGGGTTACTTGTTGGAGCACCTTCTGGCCAC
ATTGGAATGACAATATAAGCAGCAAACTTCTCCCTTGCTCTAATTTTGTTAGCAATCTTAAGCG
CGATTTCCATCGGGATTAGATTATTAGCACCACCCAAGTCCTTGTTTGAATCCCAGTTGAATGA
AGATCCAAGAAAATATTGGTTCTCAATGTAAATGAAGTGCTGAGCAGATCGTATGGCCTTAACA
TAAGCTGCGTGTATGCTCATATCTATGAGAATATTCTTCCCACATAGAAGATTTCTTCCAGTAG
CTTCCTTTGGGTCCTTTGGAAACCCTTTGACTGAACTTGAATCAATGGAACGGAAAACCTACCT
GAACATGCCAAGACTCTGGATCATTATCATTAGCAGAAGAAGCTTCAGAAAGTCCCACGATGTC
AGGAATTCTGTCTATCCTAAGCAAAGAATCATCAGAAGAAGATTTTAGTTTCCCAATTCCGCGA
GGTTTTGAAGCCTTCATCCAGCGTTCCTCGAAATTAGCAAGTACATCATATGCAGCTGGACCAT
CAATCTTGCTGTGAAGATCATGCCATGGTTCTCTTGGTCCATCATCCGCAGTAGT
						
					

						Genomic sequence
						
							TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.						
					

			
		

Sequences
Splice junction sequence	AGCGTTCCTCGAAATTAGCAAGTACATCATATGCAGCTGGACCATCAATCTTGCTGTGAAGATC ATGCCATGGTTCTCTTGGTCCATCATCCGCAGTAGTcacaaaatttgggttatggaagtcatct ttatggattgtctttaatgtcctgaagagaggatgcttgggagtatcaaatcgtccgttgcaca agtctagc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1227 Transcript exons: 7124096-7124290,7124380-7124463,7129448-7129648,7129774- 7129807,7130098-7130257,7130334-7130483,7130559-7130708, 7130784-7130854,7130957-7131034,7131104-7131207 CACAAAATTTGGGTTATGGAAGTCATCTTTATGGATTGTCTTTAATGTCCTGAAGAGAGGATGC TTGGGAGTATCAAATCGTCCGTTGCACAAGTCTAGCCCTCCAACAAATGCTACAATCTTTCTTC GGTTCTGAGCTGCTTCAGCATCTACAATCATAGTTTTCTGATGATGCGTGTAGATTGTTTCAAC TTCCAGATTTTTTTATGAAGCTGTGACCTTTCCCTCCATATCTAGGACAAAGGAGAACTTGCAC CGATGAGTGCTTGAAAAAACGGCGCCTGTTCTATCAACTTGAACTGGATACTTAAGAAGATGAC CTGACATCTCTGTGACTTCCTCTGCTGCATACTGTCTCCAATTCAGCTCACTCAATTGCCTTAC TCGTCTCACGCATTCCATGTTCTCTGGTTCCTCGAAACCTTGCTCTAGAAACCCTAGATGTTCT GCCCATAACGACATTCTATACCCAAAGATCTGCTGACCATGAGGACGAGAACCTTTCATAGCCC ATCCGAGGACTATTATATACGCTAACTGTTCCAACAGGAACTTCTCTGGTTCCAAGACAGAAAA AGTTCAAAAAGTCTTGTGGCTCAAACTGGCTATCAAGACCAACTTCCACAAGTGCCTTGTAGAT GGTTTGATACATCATTTGCATTGTCTTGTGCTGCCTGCCAGTAGAGAATTCTTTGAATAGGGTT ACTTGTTGGAGCACCTTCTGGCCACATTGGAATGACAATATAAGCAGCAAACTTCTCCCTTGCT CTAATTTTGTTAGCAATCTTAAGCGCGATTTCCATCGGGATTAGATTATTAGCACCACCCAAGT CCTTGTTTGAATCCCAGTTGAATGAAGATCCAAGAAAATATTGGTTCTCAATGTAAATGAAGTG CTGAGCAGATCGTATGGCCTTAACATAAGCTGCGTGTATGCTCATATCTATGAGAATATTCTTC CCACATAGAAGATTTCTTCCAGTAGCTTCCTTTGGGTCCTTTGGAAACCCTTTGACTGAACTTG AATCAATGGAACGGAAAACCTACCTGAACATGCCAAGACTCTGGATCATTATCATTAGCAGAAG AAGCTTCAGAAAGTCCCACGATGTCAGGAATTCTGATCCAGCGTTCCTCGAAATTAGCAAGTAC ATCATATGCAGCTGGACCATCAATCTTGCTGTGAAGATCATGCCATGGTTCTCTTGGTCCATCA TCCGCAGTAGT Transcript length: 1711 Transcript exons: 7124096-7124244,7124380-7124498,7124899-7125010,7125210- 7125247,7125335-7125457,7129429-7129649,7129774-7129805, 7129848-7129973,7130091-7130257,7130334-7130484,7130558- 7130708,7130784-7130854,7130957-7131207 CACAAAATTTGGGTTATGGAAGTCATCTTTATGGATTGTCTTTAATGTCCTGAAGAGAGGATGC TTGGGAGTATCAAATCGTCCGTTGCACAAGTCTAGCCCTCCAACAAATGCTACAATCTTTCTTC GGTTCTGAGCTGCTTCAGCATCAGATTTTTTTATGAAGCTGTGACCTTTCCCTCCATATCTAGG ACAAAGGAGAACTTGCACCGATGAGTGCTTGAAAAAACGGCGAGTCTCCTCATCGCTTGTGTTC ATAAGTCCTTTCTGTACTGAATCCCAAAAGACTCCTTGAAGTTGGATCATCCCACACCAAAACC AACACTCTAACACCTTCTTGAGATTTGACTTTAAGCAACTCTCCTAATGTACCTTGGGTCCGCC TTTCCTTAAAGGGAAGTATGTACCGGGAACTCCTCCTTGTTTACAAGGCTTTCCTCTACTGTTA AGTATCGGAAACAGCCCTTCGATTCTATTCCCGGAACACAACTGCTCGGTTGGGATTTCAACAG CTCCAATGATCTGTGATCCAATAATATCACAGGAAGAGAACTCACTTTGCCTGTTCTATCAACT TGAACTGGATACTTAAGAAGATGACCTGACATCTCTGTGACTTCCTCTGCTGCATACTGTCTCC AATTCAGCTCACTCAATTGCCTTACTCGTCTCACGCATTCCATGTTCTCTGGTTCCTCGAAACC TTGCTCTAGAAACCCTAGATGTTCTGCCCATAACGACATTCTATACCCAAAGATCTGCCTGACC ATGAGGACGAGAACCTTTCATAGCCCCTCTAGTTCCTTCCAAGGATCTCTGGTTGATATTCGCG GAACCAATTAAGACAAACTCATCATCCACTACCATACCTTTGGAATGAACATATATCATGAATC TTCGACTCTTCAAAGCTTGTACCTGTGGCTTCCGAGGACTATTATATACGCTAACTGTTCCAAC AGGAACTTCTCTGGTTCCAAGACAGAAAAAGTTCAAAAAGTCTTGTGGCTCAAACTGGCTATCA AGACCAACTTCCACAAGTGCCTTGTAGATGGTTTGATACATCATTTGCATTGTCTTGTGCTGCC TGCCAGTAGAGAATTCTTTGAATAGGGTTACTTGTTGGAGCACCTTCTGGCCACATTGGAATGA CAATATAAGCAGCAAACTTCTCCCTTGCTCTAATTTTGTTAGCAATCTTAAGCGCGATTTCCAT CGGGATTAGATTATTAGCACCTTACCCAAGTCCTTGTTTGAATCCCAGTTGAATGAAGATCCAA GAAAATATTGGTTCTCAATGTAAATGAAGTGCTGAGCAGATCGTATGGCCTTAACATAAGCTGC GTGTATGCTCATATCTATGAGAATATTCTTCCCACATAGAAGATTTCTTCCAGTAGCTTCCTTT GGGTCCTTTGGAAACCCTTTGACTGAACTTGAATCAATGGAACGGAAAACCTACCTGAACATGC CAAGACTCTGGATCATTATCATTAGCAGAAGAAGCTTCAGAAAGTCCCACGATGTCAGGAATTC TGTCTATCCTAAGCAAAGAATCATCAGAAGAAGATTTTAGTTTCCCAATTCCGCGAGGTTTTGA AGCCTTCATCCAGCGTTCCTCGAAATTAGCAAGTACATCATATGCAGCTGGACCATCAATCTTG CTGTGAAGATCATGCCATGGTTCTCTTGGTCCATCATCCGCAGTAGT Transcript length: 1750 Transcript exons: 7124096-7124284,7124380-7124498,7124899-7125081,7125112- 7125247,7125335-7125431,7129448-7129648,7129774-7129914, 7130055-7130257,7130333-7130483,7130558-7130708,7130784- 7130830,7131076-7131207 CACAAAATTTGGGTTATGGAAGTCATCTTTATGGATTGTCTTTAATGTCCTGAAGAGAGGATGC TTGGGAGTATCAAATCGTCCGTTGCACAAGTCTAGCCCTCCAACAAATGCTACAATCTTTCTTC GGTTCTGAGCTGCTTCAGCATCTACAATCATAGTTTTCTGATGATGCGTGTAGATTGTTTCCAG ATTTTTTTATGAAGCTGTGACCTTTCCCTCCATATCTAGGACAAAGGAGAACTTGCACCGATGA GTGCTTGAAAAAACGGCGAGTCTCCTCATCGCTTGTGTTCATAAGTCCTTTCTGTACTGAATCC CAAAAGACTCCTTGAAGTTGGATCATCCCACACCAAAACCAACACTCTAACACCTTCTTGAGAT TTGACTTTAAGCAACTCTCCTAATGTACCTTGGGTCGGATCATTGTTACGACGAACCAGCCTAA CCGGATGGAAAACTGACCAACCTGTGATATAAATCAACCTCCTCCAGCATTTTCCATGTCTATA CTGAATCCCACCATCAAGATGTACACTCGGAAGAGTACCGTCATCAACATGAGCATCCTGATAA AGAGTAACCCTACCGCCTTTCCTTAAAGGGAAGTATGTACCGGGAACTCCTCCTTGTTTACAAG GCTTTCCTCTACTGTTAAGTATCGGAAACAGCCCTTCGATTCTATTCCCGGAACACAACTGCTC GGTTGGGATTTCAACAGCTCGCCTGTTCTATCAACTTGAACTGGATACTTAAGAAGATGACCTG ACATCTCTGTGACTTCCTCTGCTGCATACTGTCTCCAATTCAGCTCACTCAATTGCCTTACTCG TCTCACGCATTCCATGTTCTCTGGTTCCTCGAAACCTTGCTCTAGAAACCCTAGATGTTCTGCC CATAACGACATTCTATACCCAAAGATCTGCTGACCATGAGGACGAGAACCTTTCATAGCCCATG AATAGTGTGGCTGATACCCTCCCATGGCGATTTCAGTATCTCTAGTTCCTTCCAAGGATCTCTG GTTGATATTCGCGGAACCAATTAAGACAAACTCATCATCCACATACCTGTGCAGCATTTGCATT TGCGTTTGGCTGAGGTGGCTTCCGAGGACTATTATATACGCTAACTGTTCCAACAGGAACTTCT CTGGTTCCAAGACAGAAAAAGTTCAAAAAGTCTTGTGGCTCAAACTGGCTATCAAGACCAACTT CCACAAGTGCCTTGTAGATGGTTTGATACATCATTTGCATTGTCTTGTGCTGCCCTGCCAGTAG AGAATTCTTTGAATAGGGTTACTTGTTGGAGCACCTTCTGGCCACATTGGAATGACAATATAAG CAGCAAACTTCTCCCTTGCTCTAATTTTGTTAGCAATCTTAAGCGCGATTTCCATCGGGATTAG ATTATTAGCACCTACCCAAGTCCTTGTTTGAATCCCAGTTGAATGAAGATCCAAGAAAATATTG GTTCTCAATGTAAATGAAGTGCTGAGCAGATCGTATGGCCTTAACATAAGCTGCGTGTATGCTC ATATCTATGAGAATATTCTTCCCACATAGAAGATTTCTTCCAGTAGCTTCCTTTGGGTCCTTTG GAAACCCTTTGACTGAACCCCAATTCCGCGAGGTTTTGAAGCCTTCATCCAGCGTTCCTCGAAA TTAGCAAGTACATCATATGCAGCTGGACCATCAATCTTGCTGTGAAGATCATGCCATGGTTCTC TTGGTCCATCATCCGCAGTAGT Transcript length: 1911 Transcript exons: 7124096-7124272,7124380-7124497,7124898-7125034,7125084- 7125247,7125335-7125460,7129448-7129649,7129774-7129810, 7129828-7129973,7130076-7130257,7130334-7130483,7130559- 7130708,7130784-7130854,7130957-7131207 CACAAAATTTGGGTTATGGAAGTCATCTTTATGGATTGTCTTTAATGTCCTGAAGAGAGGATGC TTGGGAGTATCAAATCGTCCGTTGCACAAGTCTAGCCCTCCAACAAATGCTACAATCTTTCTTC GGTTCTGAGCTGCTTCAGCATCTACAATCATAGTTTTCTGATGATGCGTCAGATTTTTTTATGA AGCTGTGACCTTTCCCTCCATATCTAGGACAAAGGAGAACTTGCACCGATGAGTGCTTGAAAAA ACGGCGAGTCTCCTCATCGCTTGTGTTCATAAGTCCTTTCTGTACTGAATCCCAAAAGACTCCT TGAAGTTGGATCATCCCACACCAAAACCAACACTCTAACACCTTCTTGAGATTTGACTTTAAGC AACTCTCCTAATGTACCTTGGGTCGGATCATTGTTACGACGAACCAGCCCCGTCGTATCGCATC AGCCATATCTTCCCAGCATTTTCCATGTCTATACTGAATCCCACCATCAAGATGTACACTCGGA AGAGTACCGTCATCAACATGAGCATCCTGATAAAGAGTAACCCTACCGCCTTTCCTTAAAGGGA AGTATGTACCGGGAACTCCTCCTTGTTTACAAGGCTTTCCTCTACTGTTAAGTATCGGAAACAG CCCTTCGATTCTATTCCCGGAACACAACTGCTCGGTTGGGATTTCAACAGCTCCAATGATCTGT GATCCAATAATATCACTGGCCTGTTCTATCAACTTGAACTGGATACTTAAGAAGATGACCTGAC ATCTCTGTGACTTCCTCTGCTGCATACTGTCTCCAATTCAGCTCACTCAATTGCCTTACTCGTC TCACGCATTCCATGTTCTCTGGTTCCTCGAAACCTTGCTCTAGAAACCCTAGATGTTCTGCCCA TAACGACATTCTATACCCAAAGATCTGCCTGACCATGAGGACGAGAACCTTTCATAGCCCATGA ATCCCATGGCGATTTCAGTATCTCTAGTTCCTTCCAAGGATCTCTGGTTGATATTCGCGGAACC AATTAAGACAAACTCATCATCCACTACCATACCTTTGGAATGAACATATATCATGAATCTTCGA CTCTTCAAAGCTTGTACCTTTGCGTTTGGCTGAGGTGGCTTCCGAGGACTATTATATACGCTAA CTGTTCCAACAGGAACTTCTCTGGTTCCAAGACAGAAAAAGTTCAAAAAGTCTTGTGGCTCAAA CTGGCTATCAAGACCAACTTCCACAAGTGCCTTGTAGATGGTTTGATACATCATTTGCATTGTC TTGTGCTGCCTGCCAGTAGAGAATTCTTTGAATAGGGTTACTTGTTGGAGCACCTTCTGGCCAC ATTGGAATGACAATATAAGCAGCAAACTTCTCCCTTGCTCTAATTTTGTTAGCAATCTTAAGCG CGATTTCCATCGGGATTAGATTATTAGCACCACCCAAGTCCTTGTTTGAATCCCAGTTGAATGA AGATCCAAGAAAATATTGGTTCTCAATGTAAATGAAGTGCTGAGCAGATCGTATGGCCTTAACA TAAGCTGCGTGTATGCTCATATCTATGAGAATATTCTTCCCACATAGAAGATTTCTTCCAGTAG CTTCCTTTGGGTCCTTTGGAAACCCTTTGACTGAACTTGAATCAATGGAACGGAAAACCTACCT GAACATGCCAAGACTCTGGATCATTATCATTAGCAGAAGAAGCTTCAGAAAGTCCCACGATGTC AGGAATTCTGTCTATCCTAAGCAAAGAATCATCAGAAGAAGATTTTAGTTTCCCAATTCCGCGA GGTTTTGAAGCCTTCATCCAGCGTTCCTCGAAATTAGCAAGTACATCATATGCAGCTGGACCAT CAATCTTGCTGTGAAGATCATGCCATGGTTCTCTTGGTCCATCATCCGCAGTAGT
Genomic sequence	TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.83119121

Conservation Information
Conserved circRNAs	NA
PMCS	0.83119121

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of 4_circ_ag.3

Address

Any questions?

Supported by