Plant Circular RNA Database

Detail information of Zm00001d042639_circ_g.4

			
						 General Information
					
						CircRNA Name
						Zm00001d042639_circ_g.4
					
						ID in PlantcircBase
						zma_circ_007715
					
						Alias
						Zm03circ00063, zma_circ_0001175
					
						Organism
						
							Zea mays						
					
						Position
						
							chr3: 174877179-174881919  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d042639						
					
						Parent gene annotation
						
							Mitotic spindle checkpoint protein MAD1
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d042639_circ_g.1 Zm00001d042639_circ_g.2 Zm00001d042639_circ_g.3 Zm00001d042639_circ_g.5 Zm00001d042639_circ_g.6 Zm00001d042639_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d042639_T002:5
Zm00001d042639_T006:5
Zm00001d042639_T008:5
Zm00001d042639_T004:5
Zm00001d042639_T007:5
Zm00001d042639_T009:5
Zm00001d042639_T010:5
Zm00001d042639_T003:5
Zm00001d042639_T005:5

General Information
CircRNA Name	Zm00001d042639_circ_g.4
ID in PlantcircBase	zma_circ_007715
Alias	Zm03circ00063, zma_circ_0001175
Organism	Zea mays
Position	chr3: 174877179-174881919 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d042639
Parent gene annotation	Mitotic spindle checkpoint protein MAD1
Parent gene strand	-
Alternative splicing	Zm00001d042639_circ_g.1 Zm00001d042639_circ_g.2 Zm00001d042639_circ_g.3 Zm00001d042639_circ_g.5 Zm00001d042639_circ_g.6 Zm00001d042639_circ_g.7
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d042639_T002:5 Zm00001d042639_T006:5 Zm00001d042639_T008:5 Zm00001d042639_T004:5 Zm00001d042639_T007:5 Zm00001d042639_T009:5 Zm00001d042639_T010:5 Zm00001d042639_T003:5 Zm00001d042639_T005:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCAGTACTTCTATTGTCTGCTTGGCTTCATTGTCGACTCCAAGAGTATTCATCATGCGCAGTAC
TTTTGTGCTTGAAGCAGAGTAATCCCCATGACCTAActgccgagcaatttcttgttgggatgtg
taatcgttgacctgtatatatcactaacatcaaaatatgttccaataaaatatatgaaagacca
tttcaaca

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 489
Transcript exons: 174877179-174877217,174877292-174877420,174877880-174877
949,174878027-174878114,174881757-174881919
CTGCCGAGCAATTTCTTGTTGGGATGTGTAATCGTTGACCACGATATTAGTGCTTCCTGATTCA
TAGTCAAACTCAAGCTTTTCATCATCGCTTTGGGCATACACTGACTGCAGAATAAAGCGTGTTA
CGGGAATCCCATTTGACTGCTGCTGATCATTCATCACTATCTTGTAACCGAAAAGGGAGCAGCA
GGCTTTCCGGAAGACCGAGATCCTCTCTGCAAACACCGCCTTGTATCTTTCTTCACGTTTTTCA
AGTGTCGCAATTTGATTCTTAAGTTGTGCTAACTTTTCAGCAATATTAGCGTCTACCACGGTTC
CAGGATCAGTTTGTCCTTTCAGTTCTTCAACTGCTTGCAGCCTCTCTTTTGTTTTCTTTAGCTC
AGCTTGCAGTACTTCTATTGTCTGCTTGGCTTCATTGTCGACTCCAAGAGTATTCATCATGCGC
AGTACTTTTGTGCTTGAAGCAGAGTAATCCCCATGACCTAA
						
					

						Genomic sequence
						
							CTGCCGAGCAATTTCTTGTTGGGATGTGTAATCGTTGACCTGTATATATCACTAACATCAAAAT
ATGTTCCAATAAAATATATGAAAGACCATTTCAACAGTGTGAGTCTTACCACGATATTAGTGCT
TCCTGATTCATAGTCAAACTCAAGCTTTTCATCATCGCTTTGGGCATACACTGACTGCAGAATA
AAGCGTGTTACGGGAATCCCATTTGACTGCTGCTGATCATTCATCACTATCTAGAACCATGAAA
CAAGTGTCAGATTATCATTTATGTTGAATAGCTGGATAGAGTTAGAATCATGCAAGGAAAATTC
AACAAAATATAGTAACAGAGGAAAAAATGCAGTACGTGTATAGTTGATGTTTACTGAAATGGAC
ATCACAAATGCAAACCTCAATTTTTCCTCGAGAAGACAAGCTGAGGATTATCATTACAATAAAA
GTACAAAGATGGACTCTATTGACCTCCAGTAACAAGGTGTGTGTTGCTTTTTAATTCTGTTAAA
ATCGACATTGAACAACAAGATCTATAGCTACATTTCAAGATCCTGTTAGTCATCTTTCAATTGA
TTGTGTCTAAGAAAAATGAATGAAGAATTTCTACAGGTGGCTAAAACAGTTAAATGGAGAGAGA
AGGGGTCGGGGTTGTTTAGCAAAAAGCTGCCCTCATATGGTGTGTGTTACATTATCATTACCTT
GTAACCGAAAAGGGAGCAGCAGGCTTTCCGGAAGACCGAGATCCTCTCTGCAAACACCGCCTTG
TATCTGTTTTGAACAAAGTATAATGTTATAACAAACAAAATGTGCAACAGATTCTAGAGGAGAA
ATAATTGGTCGCATACCTTTCTTCACGTTTTTCAAGTGTCGCAATTTGATTCTTAAGTTGTGCT
AACTTTTCAGCAATATTAGCGTCTACCACGGTTCCAGGATCTGCAGTCAAAGTTCCATTTATAA
GTGCCCTCAAATAAAAATAACAAGGAATTGGGCATAGAAGGCACAAGCTATTCAAAGACAGTTC
ACTCCATTTAAATACAGGTTATCTCTTAGTGACAGGGAACGAGGAACGATGGCGCGTTCCGCGT
TCCCGGAATTTCGTCCCGAAACGAGGAACGGGAACGAAGGGGAACACTACAAGAAACGCTCGCG
GAACGCCGTTTATAGAAGGTAGGAACGCTTAGCTTAGGAAGTCGCCCCGCCGTGCTTGGCCGCC
GCGCCGCCGCGCTTGGCCGCCGCGCTGGGACGACGCTCTGGGACGTTGCGGGCGTTGCCGGCCG
CCGCGCTTGGCCGCCGCGCTTGGCCGCCGCGCTGGGGCGATGCGGGCGTTGTCCGGCCGCCGCG
CTGGGACGCTGCCGTCGCCGCCGCGCAGTGGGGAAGACCGGATCACCGGAAGAGGCGGAGGAAT
CGCGCAGTGGGTAGAAGAGGCAGAGGAATCGCGCAGAGGAATCGCGTGGTGGGGAAGAGGAAGA
GGAATCGCGCAGTGGGGAAGACTGGAAGAGGAAGAGCGCAGTGGGGAAGAGAAATCGCGCAGTG
GAGGAGGTCGCGCCGTCGCGGTGCAGTGGAGGAGTCGCGCACTCGCGCTCGCAGTGGAGGAGTC
GCGCATTCGCGCTCGCAGTGGAGGAGATCCGTCGGTCCGTCCAAGGTCGCAGGAAGCTGAGGGG
TTAGGCATGGAGCGCGTAAGAAGAGGAAGGGATTATCCATGTCTGGAGCGCGTTAAGTGATTAG
GCAGGGAGCCGACCGCGTACTGCCTGCTATTTAAATAGAACTCCATCCACTGATGCACAGCAGT
ACAGCACCACAACCCAACTCAAACCTCAACGTAGACATGGTTTTCGGTTCTTCAAGCAAAAGAA
AGCGTGCGGATGAAAAAGAAGATGATGATGTGCAAGTCGTCCATGAGGTGCCTGTAGATATCCA
AGATGGTGGTGCAGACGCAGACAGTGGTGACGAAGATGGAGCTGCGGCTACTGGTACGAAACAT
CCACTTCTAGATGAAATTAATATTATTGGTGTTCCGAGTGGAAAAAATGTTGGTGGAACAAAGG
AGTGGCAGTGTAAACATTGCAAGAAATCGTACAAAGGAAGTTTAACTAGAGTTCGTGTTCATTT
GCTTGGTCCATTACCTGGTAAAAAAGCACAAATTGCACGTTGTATGTCATTGCAAAACGATCCC
AACAAGAGCAAAGCTTTGCGGGAAAAGGTGAAAGAAGCTGATAGTAAAGGATTTCATATGAGAT
CAACATCAGGGACGACCACTCCGAATCCGTTGACAAAATCGTTTGGAGTAGCCCAAAGGGAGTC
TGTCGATATGGAAATTACCAAATTTTTATGTGCCAACGGTATTCCATTCAATGTGTTGAGGAGC
CCTCAATTTTCACAAATGATAATGGCAATAAAAAATGGTCCAAAAGATTATAAAGGTCCGTCGA
GTGAAAAGGCAAGGACAACTCTCCTAGATGCATGCAAGAGAAGTGTGGAGACCGACTTAGCACC
ACTTAAAAGTACATGGTAAGTTCTTAATTTTATTGTCTTTTCATTGTATGATTTTTTCTCCAAA
AACTCACTTTTAATCATGCATTAGGTTGACACAAGGTGTTTCGGTTGTGTCCGATGGATGGACA
GATATAAAAAACAAGCCCCTAATCAATGTGATTGCGTCGAACAGTCGAGGTTCATGTTTCTTAT
ATGCAGAAGATTTCTCTGGAGTTGAAAAAACCGGTGAAGCTATTGCACAATATCTCTTGAAGGC
TATTGATGAAATTGGACCAGGAAATGTCCTTCAAGTGGTAACGGACAATGCTGCTAATTGCAAA
GCAGCTGGAAAAGAAATTGAAAAAGTAAGTCACATATTTTGTCCTTCAAGTGTTTTTTATCTTG
GATTTTCCCTAATCATATTTTGTTTGATTACAGGTGCATAAGCACATTTTTTGGGCCCCATGCG
TTGTTCACACGCTAAACCTTATATTCAAGGATTTTGCTGTGAAATTTCCATGGATGCTTGACAC
ATATAAGACTGGAAAAGCAATTGTCAAGTTTTTTCAGAATCATTGCCATTGTTTGGCAATGTTT
AGAACCAACTCTCGTTTGGACCTACTTAAGGTGAAAAAAACTCGATTTGCTTCACATTACATAT
TGCTTCAAAGACTCATAACATGTAGAGAAGCACTTGCCACCACAGTAGTCACAAGGCAGTGGAA
AGATTGGGTAAATACTTGCACTAATGATGTGAAGCACCAAGCAAGGGTCATTGTCCTAACAATA
AATGATGACAGCTTTTGGATGGAGGCTGAAAATATAATTGCTATCACAGAGCCAATATACTCCG
TATTAAGGTTTAGTGATGGAGAAGGTCCAAAGATGGGAGAAATCTACGAGAGAATGGATTGCAT
GGTTGGTGAAATAAAAGATATAATGACAAAAGATGATAACCCGCATAAAGATGATTTTGTTGAG
GTTGAAAGTATCGTTATGCGCCGTTGGGAGAAGATGAATCTTCCCCTTCATTGCTTAGCATATG
CCTTATGCCCAAAATTTTATCATCAACAATACCTCAACACCCCAGCTCCTGGTGGCACCATAAG
GCAAGCTCCTAATACAGATAAGGAGGTTATGACTAATGTGCTTGAAGCTTTTAGTAAAATTGCA
GATTCTCCAAGGGAACAACAAGTTTTGAGGGAGCAATTTAATGCTTTTATTATGAAGAAGGGAA
TGTTTGCGCTGCCACCCGTTCAATTGGATGCATTTACCATGGAGCCGATTGAATGGTGGGTAAG
TTATGGTTCTGAGACTCCAGATTTAGCTGAGGTTGCAAAAAAAGTTTTATCTCAACCCATCAGC
AGTTCATCGGCCGAGAGAATTTGGAGCACATTCAGCCATATCCATAACACCAAGCGCAATAGGA
TGAACACTACCACTGCAGATAAATTAGTCTTCATTCACTCCAATTTGCGACTTTTGTCAAGATC
AACAGATGGCTACAAACATGGCGCACATGCTAAATGGGACATTGATCCAGAAGACTCTTCTATC
TAAGCTTTGCAAGAAAGTGATTATCGTTACCGTTATATATATATATATATATATATATATATAT
ATATATATATATATATATATAAATAAGCTAAGACACTATGACTTATCATTATCGGGATCCCATC
ATTATCAATTATATATACATATATTATATATTATGTACGTGTCATTGGTTGTTTCAATTATGCA
TCGTTCCATGTTCCATTACAATCGTTCCCTAACTGCGTTCCTAAATCGTTGGGAACACGTTCCA
CGCATCGAATGAACGTGGATCAGCTGTATACCCCTCAACGTTCCATGTTGCTTTAACAGACGTA
CCGCGTTCCTCGTTCCCGTTCCTCGTTCCCAACGTTCCGGGAACCTTGTCACTAAGGGTTATCT
TGTAACTTTTGTTATATTAAGCAGATACTCCAAACACAAACCCCTTAGCAAATACAATGTAGAC
TACAGTAAGCAGAAGCAGTAAACAAGTTTTTACATATGAAAATAAATTAAAATAGAAATCCACA
GGATCATAAAAATTACAAATAATGTAGCTCGTACCAGTTTGTCCTTTCAGTTCTTCAACTGCTT
GCAGCCTCTCTTTTGTTTTCTTTAGCTCAGCTTGCAGTACTTCTATTGTCTGCTTGGCTTCATT
GTCGACTCCAAGAGTATTCATCATGCGCAGTACTTTTGTGCTTGAAGCAGAGTAATCCCCATGA
CCTAA
						
					

			
		

Sequences
Splice junction sequence	GCAGTACTTCTATTGTCTGCTTGGCTTCATTGTCGACTCCAAGAGTATTCATCATGCGCAGTAC TTTTGTGCTTGAAGCAGAGTAATCCCCATGACCTAActgccgagcaatttcttgttgggatgtg taatcgttgacctgtatatatcactaacatcaaaatatgttccaataaaatatatgaaagacca tttcaaca
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 489 Transcript exons: 174877179-174877217,174877292-174877420,174877880-174877 949,174878027-174878114,174881757-174881919 CTGCCGAGCAATTTCTTGTTGGGATGTGTAATCGTTGACCACGATATTAGTGCTTCCTGATTCA TAGTCAAACTCAAGCTTTTCATCATCGCTTTGGGCATACACTGACTGCAGAATAAAGCGTGTTA CGGGAATCCCATTTGACTGCTGCTGATCATTCATCACTATCTTGTAACCGAAAAGGGAGCAGCA GGCTTTCCGGAAGACCGAGATCCTCTCTGCAAACACCGCCTTGTATCTTTCTTCACGTTTTTCA AGTGTCGCAATTTGATTCTTAAGTTGTGCTAACTTTTCAGCAATATTAGCGTCTACCACGGTTC CAGGATCAGTTTGTCCTTTCAGTTCTTCAACTGCTTGCAGCCTCTCTTTTGTTTTCTTTAGCTC AGCTTGCAGTACTTCTATTGTCTGCTTGGCTTCATTGTCGACTCCAAGAGTATTCATCATGCGC AGTACTTTTGTGCTTGAAGCAGAGTAATCCCCATGACCTAA
Genomic sequence	CTGCCGAGCAATTTCTTGTTGGGATGTGTAATCGTTGACCTGTATATATCACTAACATCAAAAT ATGTTCCAATAAAATATATGAAAGACCATTTCAACAGTGTGAGTCTTACCACGATATTAGTGCT TCCTGATTCATAGTCAAACTCAAGCTTTTCATCATCGCTTTGGGCATACACTGACTGCAGAATA AAGCGTGTTACGGGAATCCCATTTGACTGCTGCTGATCATTCATCACTATCTAGAACCATGAAA CAAGTGTCAGATTATCATTTATGTTGAATAGCTGGATAGAGTTAGAATCATGCAAGGAAAATTC AACAAAATATAGTAACAGAGGAAAAAATGCAGTACGTGTATAGTTGATGTTTACTGAAATGGAC ATCACAAATGCAAACCTCAATTTTTCCTCGAGAAGACAAGCTGAGGATTATCATTACAATAAAA GTACAAAGATGGACTCTATTGACCTCCAGTAACAAGGTGTGTGTTGCTTTTTAATTCTGTTAAA ATCGACATTGAACAACAAGATCTATAGCTACATTTCAAGATCCTGTTAGTCATCTTTCAATTGA TTGTGTCTAAGAAAAATGAATGAAGAATTTCTACAGGTGGCTAAAACAGTTAAATGGAGAGAGA AGGGGTCGGGGTTGTTTAGCAAAAAGCTGCCCTCATATGGTGTGTGTTACATTATCATTACCTT GTAACCGAAAAGGGAGCAGCAGGCTTTCCGGAAGACCGAGATCCTCTCTGCAAACACCGCCTTG TATCTGTTTTGAACAAAGTATAATGTTATAACAAACAAAATGTGCAACAGATTCTAGAGGAGAA ATAATTGGTCGCATACCTTTCTTCACGTTTTTCAAGTGTCGCAATTTGATTCTTAAGTTGTGCT AACTTTTCAGCAATATTAGCGTCTACCACGGTTCCAGGATCTGCAGTCAAAGTTCCATTTATAA GTGCCCTCAAATAAAAATAACAAGGAATTGGGCATAGAAGGCACAAGCTATTCAAAGACAGTTC ACTCCATTTAAATACAGGTTATCTCTTAGTGACAGGGAACGAGGAACGATGGCGCGTTCCGCGT TCCCGGAATTTCGTCCCGAAACGAGGAACGGGAACGAAGGGGAACACTACAAGAAACGCTCGCG GAACGCCGTTTATAGAAGGTAGGAACGCTTAGCTTAGGAAGTCGCCCCGCCGTGCTTGGCCGCC GCGCCGCCGCGCTTGGCCGCCGCGCTGGGACGACGCTCTGGGACGTTGCGGGCGTTGCCGGCCG CCGCGCTTGGCCGCCGCGCTTGGCCGCCGCGCTGGGGCGATGCGGGCGTTGTCCGGCCGCCGCG CTGGGACGCTGCCGTCGCCGCCGCGCAGTGGGGAAGACCGGATCACCGGAAGAGGCGGAGGAAT CGCGCAGTGGGTAGAAGAGGCAGAGGAATCGCGCAGAGGAATCGCGTGGTGGGGAAGAGGAAGA GGAATCGCGCAGTGGGGAAGACTGGAAGAGGAAGAGCGCAGTGGGGAAGAGAAATCGCGCAGTG GAGGAGGTCGCGCCGTCGCGGTGCAGTGGAGGAGTCGCGCACTCGCGCTCGCAGTGGAGGAGTC GCGCATTCGCGCTCGCAGTGGAGGAGATCCGTCGGTCCGTCCAAGGTCGCAGGAAGCTGAGGGG TTAGGCATGGAGCGCGTAAGAAGAGGAAGGGATTATCCATGTCTGGAGCGCGTTAAGTGATTAG GCAGGGAGCCGACCGCGTACTGCCTGCTATTTAAATAGAACTCCATCCACTGATGCACAGCAGT ACAGCACCACAACCCAACTCAAACCTCAACGTAGACATGGTTTTCGGTTCTTCAAGCAAAAGAA AGCGTGCGGATGAAAAAGAAGATGATGATGTGCAAGTCGTCCATGAGGTGCCTGTAGATATCCA AGATGGTGGTGCAGACGCAGACAGTGGTGACGAAGATGGAGCTGCGGCTACTGGTACGAAACAT CCACTTCTAGATGAAATTAATATTATTGGTGTTCCGAGTGGAAAAAATGTTGGTGGAACAAAGG AGTGGCAGTGTAAACATTGCAAGAAATCGTACAAAGGAAGTTTAACTAGAGTTCGTGTTCATTT GCTTGGTCCATTACCTGGTAAAAAAGCACAAATTGCACGTTGTATGTCATTGCAAAACGATCCC AACAAGAGCAAAGCTTTGCGGGAAAAGGTGAAAGAAGCTGATAGTAAAGGATTTCATATGAGAT CAACATCAGGGACGACCACTCCGAATCCGTTGACAAAATCGTTTGGAGTAGCCCAAAGGGAGTC TGTCGATATGGAAATTACCAAATTTTTATGTGCCAACGGTATTCCATTCAATGTGTTGAGGAGC CCTCAATTTTCACAAATGATAATGGCAATAAAAAATGGTCCAAAAGATTATAAAGGTCCGTCGA GTGAAAAGGCAAGGACAACTCTCCTAGATGCATGCAAGAGAAGTGTGGAGACCGACTTAGCACC ACTTAAAAGTACATGGTAAGTTCTTAATTTTATTGTCTTTTCATTGTATGATTTTTTCTCCAAA AACTCACTTTTAATCATGCATTAGGTTGACACAAGGTGTTTCGGTTGTGTCCGATGGATGGACA GATATAAAAAACAAGCCCCTAATCAATGTGATTGCGTCGAACAGTCGAGGTTCATGTTTCTTAT ATGCAGAAGATTTCTCTGGAGTTGAAAAAACCGGTGAAGCTATTGCACAATATCTCTTGAAGGC TATTGATGAAATTGGACCAGGAAATGTCCTTCAAGTGGTAACGGACAATGCTGCTAATTGCAAA GCAGCTGGAAAAGAAATTGAAAAAGTAAGTCACATATTTTGTCCTTCAAGTGTTTTTTATCTTG GATTTTCCCTAATCATATTTTGTTTGATTACAGGTGCATAAGCACATTTTTTGGGCCCCATGCG TTGTTCACACGCTAAACCTTATATTCAAGGATTTTGCTGTGAAATTTCCATGGATGCTTGACAC ATATAAGACTGGAAAAGCAATTGTCAAGTTTTTTCAGAATCATTGCCATTGTTTGGCAATGTTT AGAACCAACTCTCGTTTGGACCTACTTAAGGTGAAAAAAACTCGATTTGCTTCACATTACATAT TGCTTCAAAGACTCATAACATGTAGAGAAGCACTTGCCACCACAGTAGTCACAAGGCAGTGGAA AGATTGGGTAAATACTTGCACTAATGATGTGAAGCACCAAGCAAGGGTCATTGTCCTAACAATA AATGATGACAGCTTTTGGATGGAGGCTGAAAATATAATTGCTATCACAGAGCCAATATACTCCG TATTAAGGTTTAGTGATGGAGAAGGTCCAAAGATGGGAGAAATCTACGAGAGAATGGATTGCAT GGTTGGTGAAATAAAAGATATAATGACAAAAGATGATAACCCGCATAAAGATGATTTTGTTGAG GTTGAAAGTATCGTTATGCGCCGTTGGGAGAAGATGAATCTTCCCCTTCATTGCTTAGCATATG CCTTATGCCCAAAATTTTATCATCAACAATACCTCAACACCCCAGCTCCTGGTGGCACCATAAG GCAAGCTCCTAATACAGATAAGGAGGTTATGACTAATGTGCTTGAAGCTTTTAGTAAAATTGCA GATTCTCCAAGGGAACAACAAGTTTTGAGGGAGCAATTTAATGCTTTTATTATGAAGAAGGGAA TGTTTGCGCTGCCACCCGTTCAATTGGATGCATTTACCATGGAGCCGATTGAATGGTGGGTAAG TTATGGTTCTGAGACTCCAGATTTAGCTGAGGTTGCAAAAAAAGTTTTATCTCAACCCATCAGC AGTTCATCGGCCGAGAGAATTTGGAGCACATTCAGCCATATCCATAACACCAAGCGCAATAGGA TGAACACTACCACTGCAGATAAATTAGTCTTCATTCACTCCAATTTGCGACTTTTGTCAAGATC AACAGATGGCTACAAACATGGCGCACATGCTAAATGGGACATTGATCCAGAAGACTCTTCTATC TAAGCTTTGCAAGAAAGTGATTATCGTTACCGTTATATATATATATATATATATATATATATAT ATATATATATATATATATATAAATAAGCTAAGACACTATGACTTATCATTATCGGGATCCCATC ATTATCAATTATATATACATATATTATATATTATGTACGTGTCATTGGTTGTTTCAATTATGCA TCGTTCCATGTTCCATTACAATCGTTCCCTAACTGCGTTCCTAAATCGTTGGGAACACGTTCCA CGCATCGAATGAACGTGGATCAGCTGTATACCCCTCAACGTTCCATGTTGCTTTAACAGACGTA CCGCGTTCCTCGTTCCCGTTCCTCGTTCCCAACGTTCCGGGAACCTTGTCACTAAGGGTTATCT TGTAACTTTTGTTATATTAAGCAGATACTCCAAACACAAACCCCTTAGCAAATACAATGTAGAC TACAGTAAGCAGAAGCAGTAAACAAGTTTTTACATATGAAAATAAATTAAAATAGAAATCCACA GGATCATAAAAATTACAAATAATGTAGCTCGTACCAGTTTGTCCTTTCAGTTCTTCAACTGCTT GCAGCCTCTCTTTTGTTTTCTTTAGCTCAGCTTGCAGTACTTCTATTGTCTGCTTGGCTTCATT GTCGACTCCAAGAGTATTCATCATGCGCAGTACTTTTGTGCTTGAAGCAGAGTAATCCCCATGA CCTAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.139649284

Conservation Information
Conserved circRNAs	NA
PMCS	0.139649284

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							174881876-174877181(-)
174877355-174881918(-)
						
						Potential amino acid sequence
						
							MMNTLGVDNEAKQTIEVLQAELKKTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKNQIATLE
KREERYKAVFAERISVFRKACCSLFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFDYE
SGSTNIVVNDYTSQQEIARQLGHGDYSASSTKVLRMMNTLGVDNEAKQTIEVLQAELKKTKERL
QAVEELKGQTDPGTVVDANIAEKLAQLKNQIATLEKREERYKAVFAERISVFRKACCSLFGYKI
VMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFDYESGSTNIVVNDYTSQQEIARQLGHGDYSAS
STKVLRMMNTLGVDNEAKQTIEVLQAELKKTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKN
QIATLEKREERYKAVFAERISVFRKACCSLFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEK
LEFDYESGSTNIVVNDYTSQQEIARQLGHGDYSASSTKVLRMMNTLGVDNEAKQTIEVLQAELK
KTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKNQIATLEKREERYKAVFAERISVFRKACCS
LFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFDYESGSTNIVVNDYTSQQEIARQ(-)
MPKAMMKSLSLTMNQEALISWSTITHPNKKLLGS*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	174881876-174877181(-) 174877355-174881918(-)
Potential amino acid sequence	MMNTLGVDNEAKQTIEVLQAELKKTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKNQIATLE KREERYKAVFAERISVFRKACCSLFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFDYE SGSTNIVVNDYTSQQEIARQLGHGDYSASSTKVLRMMNTLGVDNEAKQTIEVLQAELKKTKERL QAVEELKGQTDPGTVVDANIAEKLAQLKNQIATLEKREERYKAVFAERISVFRKACCSLFGYKI VMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFDYESGSTNIVVNDYTSQQEIARQLGHGDYSAS STKVLRMMNTLGVDNEAKQTIEVLQAELKKTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKN QIATLEKREERYKAVFAERISVFRKACCSLFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEK LEFDYESGSTNIVVNDYTSQQEIARQLGHGDYSASSTKVLRMMNTLGVDNEAKQTIEVLQAELK KTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKNQIATLEKREERYKAVFAERISVFRKACCS LFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFDYESGSTNIVVNDYTSQQEIARQ(-) MPKAMMKSLSLTMNQEALISWSTITHPNKKLLGS*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b

circRNA

Detail information of Zm00001d042639_circ_g.4

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