Plant Circular RNA Database

Detail information of Zm00001d042639_circ_g.5

			
						 General Information
					
						CircRNA Name
						Zm00001d042639_circ_g.5
					
						ID in PlantcircBase
						zma_circ_007716
					
						Alias
						zma_circ_0001229
					
						Organism
						
							Zea mays						
					
						Position
						
							chr3: 174877292-174881919  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d042639						
					
						Parent gene annotation
						
							Mitotic spindle checkpoint protein MAD1
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d042639_circ_g.1 Zm00001d042639_circ_g.2 Zm00001d042639_circ_g.3 Zm00001d042639_circ_g.4 Zm00001d042639_circ_g.6 Zm00001d042639_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d042639_T009:4
Zm00001d042639_T007:4
Zm00001d042639_T003:4
Zm00001d042639_T008:4
Zm00001d042639_T005:4
Zm00001d042639_T010:4
Zm00001d042639_T002:4
Zm00001d042639_T006:4
Zm00001d042639_T004:4

General Information
CircRNA Name	Zm00001d042639_circ_g.5
ID in PlantcircBase	zma_circ_007716
Alias	zma_circ_0001229
Organism	Zea mays
Position	chr3: 174877292-174881919 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d042639
Parent gene annotation	Mitotic spindle checkpoint protein MAD1
Parent gene strand	-
Alternative splicing	Zm00001d042639_circ_g.1 Zm00001d042639_circ_g.2 Zm00001d042639_circ_g.3 Zm00001d042639_circ_g.4 Zm00001d042639_circ_g.6 Zm00001d042639_circ_g.7
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d042639_T009:4 Zm00001d042639_T007:4 Zm00001d042639_T003:4 Zm00001d042639_T008:4 Zm00001d042639_T005:4 Zm00001d042639_T010:4 Zm00001d042639_T002:4 Zm00001d042639_T006:4 Zm00001d042639_T004:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCAGTACTTCTATTGTCTGCTTGGCTTCATTGTCGACTCCAAGAGTATTCATCATGCGCAGTAC
TTTTGTGCTTGAAGCAGAGTAATCCCCATGACCTAAcacgatattagtgcttcctgattcatag
tcaaactcaagcttttcatcatcgctttgggcatacactgactgcagaataaagcgtgttacgg
gaatccca

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 450
Transcript exons: 174877292-174877420,174877880-174877949,174878027-174878
114,174881757-174881919
CACGATATTAGTGCTTCCTGATTCATAGTCAAACTCAAGCTTTTCATCATCGCTTTGGGCATAC
ACTGACTGCAGAATAAAGCGTGTTACGGGAATCCCATTTGACTGCTGCTGATCATTCATCACTA
TCTTGTAACCGAAAAGGGAGCAGCAGGCTTTCCGGAAGACCGAGATCCTCTCTGCAAACACCGC
CTTGTATCTTTCTTCACGTTTTTCAAGTGTCGCAATTTGATTCTTAAGTTGTGCTAACTTTTCA
GCAATATTAGCGTCTACCACGGTTCCAGGATCAGTTTGTCCTTTCAGTTCTTCAACTGCTTGCA
GCCTCTCTTTTGTTTTCTTTAGCTCAGCTTGCAGTACTTCTATTGTCTGCTTGGCTTCATTGTC
GACTCCAAGAGTATTCATCATGCGCAGTACTTTTGTGCTTGAAGCAGAGTAATCCCCATGACCT
AA
						
					

						Genomic sequence
						
							CACGATATTAGTGCTTCCTGATTCATAGTCAAACTCAAGCTTTTCATCATCGCTTTGGGCATAC
ACTGACTGCAGAATAAAGCGTGTTACGGGAATCCCATTTGACTGCTGCTGATCATTCATCACTA
TCTAGAACCATGAAACAAGTGTCAGATTATCATTTATGTTGAATAGCTGGATAGAGTTAGAATC
ATGCAAGGAAAATTCAACAAAATATAGTAACAGAGGAAAAAATGCAGTACGTGTATAGTTGATG
TTTACTGAAATGGACATCACAAATGCAAACCTCAATTTTTCCTCGAGAAGACAAGCTGAGGATT
ATCATTACAATAAAAGTACAAAGATGGACTCTATTGACCTCCAGTAACAAGGTGTGTGTTGCTT
TTTAATTCTGTTAAAATCGACATTGAACAACAAGATCTATAGCTACATTTCAAGATCCTGTTAG
TCATCTTTCAATTGATTGTGTCTAAGAAAAATGAATGAAGAATTTCTACAGGTGGCTAAAACAG
TTAAATGGAGAGAGAAGGGGTCGGGGTTGTTTAGCAAAAAGCTGCCCTCATATGGTGTGTGTTA
CATTATCATTACCTTGTAACCGAAAAGGGAGCAGCAGGCTTTCCGGAAGACCGAGATCCTCTCT
GCAAACACCGCCTTGTATCTGTTTTGAACAAAGTATAATGTTATAACAAACAAAATGTGCAACA
GATTCTAGAGGAGAAATAATTGGTCGCATACCTTTCTTCACGTTTTTCAAGTGTCGCAATTTGA
TTCTTAAGTTGTGCTAACTTTTCAGCAATATTAGCGTCTACCACGGTTCCAGGATCTGCAGTCA
AAGTTCCATTTATAAGTGCCCTCAAATAAAAATAACAAGGAATTGGGCATAGAAGGCACAAGCT
ATTCAAAGACAGTTCACTCCATTTAAATACAGGTTATCTCTTAGTGACAGGGAACGAGGAACGA
TGGCGCGTTCCGCGTTCCCGGAATTTCGTCCCGAAACGAGGAACGGGAACGAAGGGGAACACTA
CAAGAAACGCTCGCGGAACGCCGTTTATAGAAGGTAGGAACGCTTAGCTTAGGAAGTCGCCCCG
CCGTGCTTGGCCGCCGCGCCGCCGCGCTTGGCCGCCGCGCTGGGACGACGCTCTGGGACGTTGC
GGGCGTTGCCGGCCGCCGCGCTTGGCCGCCGCGCTTGGCCGCCGCGCTGGGGCGATGCGGGCGT
TGTCCGGCCGCCGCGCTGGGACGCTGCCGTCGCCGCCGCGCAGTGGGGAAGACCGGATCACCGG
AAGAGGCGGAGGAATCGCGCAGTGGGTAGAAGAGGCAGAGGAATCGCGCAGAGGAATCGCGTGG
TGGGGAAGAGGAAGAGGAATCGCGCAGTGGGGAAGACTGGAAGAGGAAGAGCGCAGTGGGGAAG
AGAAATCGCGCAGTGGAGGAGGTCGCGCCGTCGCGGTGCAGTGGAGGAGTCGCGCACTCGCGCT
CGCAGTGGAGGAGTCGCGCATTCGCGCTCGCAGTGGAGGAGATCCGTCGGTCCGTCCAAGGTCG
CAGGAAGCTGAGGGGTTAGGCATGGAGCGCGTAAGAAGAGGAAGGGATTATCCATGTCTGGAGC
GCGTTAAGTGATTAGGCAGGGAGCCGACCGCGTACTGCCTGCTATTTAAATAGAACTCCATCCA
CTGATGCACAGCAGTACAGCACCACAACCCAACTCAAACCTCAACGTAGACATGGTTTTCGGTT
CTTCAAGCAAAAGAAAGCGTGCGGATGAAAAAGAAGATGATGATGTGCAAGTCGTCCATGAGGT
GCCTGTAGATATCCAAGATGGTGGTGCAGACGCAGACAGTGGTGACGAAGATGGAGCTGCGGCT
ACTGGTACGAAACATCCACTTCTAGATGAAATTAATATTATTGGTGTTCCGAGTGGAAAAAATG
TTGGTGGAACAAAGGAGTGGCAGTGTAAACATTGCAAGAAATCGTACAAAGGAAGTTTAACTAG
AGTTCGTGTTCATTTGCTTGGTCCATTACCTGGTAAAAAAGCACAAATTGCACGTTGTATGTCA
TTGCAAAACGATCCCAACAAGAGCAAAGCTTTGCGGGAAAAGGTGAAAGAAGCTGATAGTAAAG
GATTTCATATGAGATCAACATCAGGGACGACCACTCCGAATCCGTTGACAAAATCGTTTGGAGT
AGCCCAAAGGGAGTCTGTCGATATGGAAATTACCAAATTTTTATGTGCCAACGGTATTCCATTC
AATGTGTTGAGGAGCCCTCAATTTTCACAAATGATAATGGCAATAAAAAATGGTCCAAAAGATT
ATAAAGGTCCGTCGAGTGAAAAGGCAAGGACAACTCTCCTAGATGCATGCAAGAGAAGTGTGGA
GACCGACTTAGCACCACTTAAAAGTACATGGTAAGTTCTTAATTTTATTGTCTTTTCATTGTAT
GATTTTTTCTCCAAAAACTCACTTTTAATCATGCATTAGGTTGACACAAGGTGTTTCGGTTGTG
TCCGATGGATGGACAGATATAAAAAACAAGCCCCTAATCAATGTGATTGCGTCGAACAGTCGAG
GTTCATGTTTCTTATATGCAGAAGATTTCTCTGGAGTTGAAAAAACCGGTGAAGCTATTGCACA
ATATCTCTTGAAGGCTATTGATGAAATTGGACCAGGAAATGTCCTTCAAGTGGTAACGGACAAT
GCTGCTAATTGCAAAGCAGCTGGAAAAGAAATTGAAAAAGTAAGTCACATATTTTGTCCTTCAA
GTGTTTTTTATCTTGGATTTTCCCTAATCATATTTTGTTTGATTACAGGTGCATAAGCACATTT
TTTGGGCCCCATGCGTTGTTCACACGCTAAACCTTATATTCAAGGATTTTGCTGTGAAATTTCC
ATGGATGCTTGACACATATAAGACTGGAAAAGCAATTGTCAAGTTTTTTCAGAATCATTGCCAT
TGTTTGGCAATGTTTAGAACCAACTCTCGTTTGGACCTACTTAAGGTGAAAAAAACTCGATTTG
CTTCACATTACATATTGCTTCAAAGACTCATAACATGTAGAGAAGCACTTGCCACCACAGTAGT
CACAAGGCAGTGGAAAGATTGGGTAAATACTTGCACTAATGATGTGAAGCACCAAGCAAGGGTC
ATTGTCCTAACAATAAATGATGACAGCTTTTGGATGGAGGCTGAAAATATAATTGCTATCACAG
AGCCAATATACTCCGTATTAAGGTTTAGTGATGGAGAAGGTCCAAAGATGGGAGAAATCTACGA
GAGAATGGATTGCATGGTTGGTGAAATAAAAGATATAATGACAAAAGATGATAACCCGCATAAA
GATGATTTTGTTGAGGTTGAAAGTATCGTTATGCGCCGTTGGGAGAAGATGAATCTTCCCCTTC
ATTGCTTAGCATATGCCTTATGCCCAAAATTTTATCATCAACAATACCTCAACACCCCAGCTCC
TGGTGGCACCATAAGGCAAGCTCCTAATACAGATAAGGAGGTTATGACTAATGTGCTTGAAGCT
TTTAGTAAAATTGCAGATTCTCCAAGGGAACAACAAGTTTTGAGGGAGCAATTTAATGCTTTTA
TTATGAAGAAGGGAATGTTTGCGCTGCCACCCGTTCAATTGGATGCATTTACCATGGAGCCGAT
TGAATGGTGGGTAAGTTATGGTTCTGAGACTCCAGATTTAGCTGAGGTTGCAAAAAAAGTTTTA
TCTCAACCCATCAGCAGTTCATCGGCCGAGAGAATTTGGAGCACATTCAGCCATATCCATAACA
CCAAGCGCAATAGGATGAACACTACCACTGCAGATAAATTAGTCTTCATTCACTCCAATTTGCG
ACTTTTGTCAAGATCAACAGATGGCTACAAACATGGCGCACATGCTAAATGGGACATTGATCCA
GAAGACTCTTCTATCTAAGCTTTGCAAGAAAGTGATTATCGTTACCGTTATATATATATATATA
TATATATATATATATATATATATATATATATATATAAATAAGCTAAGACACTATGACTTATCAT
TATCGGGATCCCATCATTATCAATTATATATACATATATTATATATTATGTACGTGTCATTGGT
TGTTTCAATTATGCATCGTTCCATGTTCCATTACAATCGTTCCCTAACTGCGTTCCTAAATCGT
TGGGAACACGTTCCACGCATCGAATGAACGTGGATCAGCTGTATACCCCTCAACGTTCCATGTT
GCTTTAACAGACGTACCGCGTTCCTCGTTCCCGTTCCTCGTTCCCAACGTTCCGGGAACCTTGT
CACTAAGGGTTATCTTGTAACTTTTGTTATATTAAGCAGATACTCCAAACACAAACCCCTTAGC
AAATACAATGTAGACTACAGTAAGCAGAAGCAGTAAACAAGTTTTTACATATGAAAATAAATTA
AAATAGAAATCCACAGGATCATAAAAATTACAAATAATGTAGCTCGTACCAGTTTGTCCTTTCA
GTTCTTCAACTGCTTGCAGCCTCTCTTTTGTTTTCTTTAGCTCAGCTTGCAGTACTTCTATTGT
CTGCTTGGCTTCATTGTCGACTCCAAGAGTATTCATCATGCGCAGTACTTTTGTGCTTGAAGCA
GAGTAATCCCCATGACCTAA
						
					

			
		

Sequences
Splice junction sequence	GCAGTACTTCTATTGTCTGCTTGGCTTCATTGTCGACTCCAAGAGTATTCATCATGCGCAGTAC TTTTGTGCTTGAAGCAGAGTAATCCCCATGACCTAAcacgatattagtgcttcctgattcatag tcaaactcaagcttttcatcatcgctttgggcatacactgactgcagaataaagcgtgttacgg gaatccca
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 450 Transcript exons: 174877292-174877420,174877880-174877949,174878027-174878 114,174881757-174881919 CACGATATTAGTGCTTCCTGATTCATAGTCAAACTCAAGCTTTTCATCATCGCTTTGGGCATAC ACTGACTGCAGAATAAAGCGTGTTACGGGAATCCCATTTGACTGCTGCTGATCATTCATCACTA TCTTGTAACCGAAAAGGGAGCAGCAGGCTTTCCGGAAGACCGAGATCCTCTCTGCAAACACCGC CTTGTATCTTTCTTCACGTTTTTCAAGTGTCGCAATTTGATTCTTAAGTTGTGCTAACTTTTCA GCAATATTAGCGTCTACCACGGTTCCAGGATCAGTTTGTCCTTTCAGTTCTTCAACTGCTTGCA GCCTCTCTTTTGTTTTCTTTAGCTCAGCTTGCAGTACTTCTATTGTCTGCTTGGCTTCATTGTC GACTCCAAGAGTATTCATCATGCGCAGTACTTTTGTGCTTGAAGCAGAGTAATCCCCATGACCT AA
Genomic sequence	CACGATATTAGTGCTTCCTGATTCATAGTCAAACTCAAGCTTTTCATCATCGCTTTGGGCATAC ACTGACTGCAGAATAAAGCGTGTTACGGGAATCCCATTTGACTGCTGCTGATCATTCATCACTA TCTAGAACCATGAAACAAGTGTCAGATTATCATTTATGTTGAATAGCTGGATAGAGTTAGAATC ATGCAAGGAAAATTCAACAAAATATAGTAACAGAGGAAAAAATGCAGTACGTGTATAGTTGATG TTTACTGAAATGGACATCACAAATGCAAACCTCAATTTTTCCTCGAGAAGACAAGCTGAGGATT ATCATTACAATAAAAGTACAAAGATGGACTCTATTGACCTCCAGTAACAAGGTGTGTGTTGCTT TTTAATTCTGTTAAAATCGACATTGAACAACAAGATCTATAGCTACATTTCAAGATCCTGTTAG TCATCTTTCAATTGATTGTGTCTAAGAAAAATGAATGAAGAATTTCTACAGGTGGCTAAAACAG TTAAATGGAGAGAGAAGGGGTCGGGGTTGTTTAGCAAAAAGCTGCCCTCATATGGTGTGTGTTA CATTATCATTACCTTGTAACCGAAAAGGGAGCAGCAGGCTTTCCGGAAGACCGAGATCCTCTCT GCAAACACCGCCTTGTATCTGTTTTGAACAAAGTATAATGTTATAACAAACAAAATGTGCAACA GATTCTAGAGGAGAAATAATTGGTCGCATACCTTTCTTCACGTTTTTCAAGTGTCGCAATTTGA TTCTTAAGTTGTGCTAACTTTTCAGCAATATTAGCGTCTACCACGGTTCCAGGATCTGCAGTCA AAGTTCCATTTATAAGTGCCCTCAAATAAAAATAACAAGGAATTGGGCATAGAAGGCACAAGCT ATTCAAAGACAGTTCACTCCATTTAAATACAGGTTATCTCTTAGTGACAGGGAACGAGGAACGA TGGCGCGTTCCGCGTTCCCGGAATTTCGTCCCGAAACGAGGAACGGGAACGAAGGGGAACACTA CAAGAAACGCTCGCGGAACGCCGTTTATAGAAGGTAGGAACGCTTAGCTTAGGAAGTCGCCCCG CCGTGCTTGGCCGCCGCGCCGCCGCGCTTGGCCGCCGCGCTGGGACGACGCTCTGGGACGTTGC GGGCGTTGCCGGCCGCCGCGCTTGGCCGCCGCGCTTGGCCGCCGCGCTGGGGCGATGCGGGCGT TGTCCGGCCGCCGCGCTGGGACGCTGCCGTCGCCGCCGCGCAGTGGGGAAGACCGGATCACCGG AAGAGGCGGAGGAATCGCGCAGTGGGTAGAAGAGGCAGAGGAATCGCGCAGAGGAATCGCGTGG TGGGGAAGAGGAAGAGGAATCGCGCAGTGGGGAAGACTGGAAGAGGAAGAGCGCAGTGGGGAAG AGAAATCGCGCAGTGGAGGAGGTCGCGCCGTCGCGGTGCAGTGGAGGAGTCGCGCACTCGCGCT CGCAGTGGAGGAGTCGCGCATTCGCGCTCGCAGTGGAGGAGATCCGTCGGTCCGTCCAAGGTCG CAGGAAGCTGAGGGGTTAGGCATGGAGCGCGTAAGAAGAGGAAGGGATTATCCATGTCTGGAGC GCGTTAAGTGATTAGGCAGGGAGCCGACCGCGTACTGCCTGCTATTTAAATAGAACTCCATCCA CTGATGCACAGCAGTACAGCACCACAACCCAACTCAAACCTCAACGTAGACATGGTTTTCGGTT CTTCAAGCAAAAGAAAGCGTGCGGATGAAAAAGAAGATGATGATGTGCAAGTCGTCCATGAGGT GCCTGTAGATATCCAAGATGGTGGTGCAGACGCAGACAGTGGTGACGAAGATGGAGCTGCGGCT ACTGGTACGAAACATCCACTTCTAGATGAAATTAATATTATTGGTGTTCCGAGTGGAAAAAATG TTGGTGGAACAAAGGAGTGGCAGTGTAAACATTGCAAGAAATCGTACAAAGGAAGTTTAACTAG AGTTCGTGTTCATTTGCTTGGTCCATTACCTGGTAAAAAAGCACAAATTGCACGTTGTATGTCA TTGCAAAACGATCCCAACAAGAGCAAAGCTTTGCGGGAAAAGGTGAAAGAAGCTGATAGTAAAG GATTTCATATGAGATCAACATCAGGGACGACCACTCCGAATCCGTTGACAAAATCGTTTGGAGT AGCCCAAAGGGAGTCTGTCGATATGGAAATTACCAAATTTTTATGTGCCAACGGTATTCCATTC AATGTGTTGAGGAGCCCTCAATTTTCACAAATGATAATGGCAATAAAAAATGGTCCAAAAGATT ATAAAGGTCCGTCGAGTGAAAAGGCAAGGACAACTCTCCTAGATGCATGCAAGAGAAGTGTGGA GACCGACTTAGCACCACTTAAAAGTACATGGTAAGTTCTTAATTTTATTGTCTTTTCATTGTAT GATTTTTTCTCCAAAAACTCACTTTTAATCATGCATTAGGTTGACACAAGGTGTTTCGGTTGTG TCCGATGGATGGACAGATATAAAAAACAAGCCCCTAATCAATGTGATTGCGTCGAACAGTCGAG GTTCATGTTTCTTATATGCAGAAGATTTCTCTGGAGTTGAAAAAACCGGTGAAGCTATTGCACA ATATCTCTTGAAGGCTATTGATGAAATTGGACCAGGAAATGTCCTTCAAGTGGTAACGGACAAT GCTGCTAATTGCAAAGCAGCTGGAAAAGAAATTGAAAAAGTAAGTCACATATTTTGTCCTTCAA GTGTTTTTTATCTTGGATTTTCCCTAATCATATTTTGTTTGATTACAGGTGCATAAGCACATTT TTTGGGCCCCATGCGTTGTTCACACGCTAAACCTTATATTCAAGGATTTTGCTGTGAAATTTCC ATGGATGCTTGACACATATAAGACTGGAAAAGCAATTGTCAAGTTTTTTCAGAATCATTGCCAT TGTTTGGCAATGTTTAGAACCAACTCTCGTTTGGACCTACTTAAGGTGAAAAAAACTCGATTTG CTTCACATTACATATTGCTTCAAAGACTCATAACATGTAGAGAAGCACTTGCCACCACAGTAGT CACAAGGCAGTGGAAAGATTGGGTAAATACTTGCACTAATGATGTGAAGCACCAAGCAAGGGTC ATTGTCCTAACAATAAATGATGACAGCTTTTGGATGGAGGCTGAAAATATAATTGCTATCACAG AGCCAATATACTCCGTATTAAGGTTTAGTGATGGAGAAGGTCCAAAGATGGGAGAAATCTACGA GAGAATGGATTGCATGGTTGGTGAAATAAAAGATATAATGACAAAAGATGATAACCCGCATAAA GATGATTTTGTTGAGGTTGAAAGTATCGTTATGCGCCGTTGGGAGAAGATGAATCTTCCCCTTC ATTGCTTAGCATATGCCTTATGCCCAAAATTTTATCATCAACAATACCTCAACACCCCAGCTCC TGGTGGCACCATAAGGCAAGCTCCTAATACAGATAAGGAGGTTATGACTAATGTGCTTGAAGCT TTTAGTAAAATTGCAGATTCTCCAAGGGAACAACAAGTTTTGAGGGAGCAATTTAATGCTTTTA TTATGAAGAAGGGAATGTTTGCGCTGCCACCCGTTCAATTGGATGCATTTACCATGGAGCCGAT TGAATGGTGGGTAAGTTATGGTTCTGAGACTCCAGATTTAGCTGAGGTTGCAAAAAAAGTTTTA TCTCAACCCATCAGCAGTTCATCGGCCGAGAGAATTTGGAGCACATTCAGCCATATCCATAACA CCAAGCGCAATAGGATGAACACTACCACTGCAGATAAATTAGTCTTCATTCACTCCAATTTGCG ACTTTTGTCAAGATCAACAGATGGCTACAAACATGGCGCACATGCTAAATGGGACATTGATCCA GAAGACTCTTCTATCTAAGCTTTGCAAGAAAGTGATTATCGTTACCGTTATATATATATATATA TATATATATATATATATATATATATATATATATATAAATAAGCTAAGACACTATGACTTATCAT TATCGGGATCCCATCATTATCAATTATATATACATATATTATATATTATGTACGTGTCATTGGT TGTTTCAATTATGCATCGTTCCATGTTCCATTACAATCGTTCCCTAACTGCGTTCCTAAATCGT TGGGAACACGTTCCACGCATCGAATGAACGTGGATCAGCTGTATACCCCTCAACGTTCCATGTT GCTTTAACAGACGTACCGCGTTCCTCGTTCCCGTTCCTCGTTCCCAACGTTCCGGGAACCTTGT CACTAAGGGTTATCTTGTAACTTTTGTTATATTAAGCAGATACTCCAAACACAAACCCCTTAGC AAATACAATGTAGACTACAGTAAGCAGAAGCAGTAAACAAGTTTTTACATATGAAAATAAATTA AAATAGAAATCCACAGGATCATAAAAATTACAAATAATGTAGCTCGTACCAGTTTGTCCTTTCA GTTCTTCAACTGCTTGCAGCCTCTCTTTTGTTTTCTTTAGCTCAGCTTGCAGTACTTCTATTGT CTGCTTGGCTTCATTGTCGACTCCAAGAGTATTCATCATGCGCAGTACTTTTGTGCTTGAAGCA GAGTAATCCCCATGACCTAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.139276545

Conservation Information
Conserved circRNAs	NA
PMCS	0.139276545

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							174881876-174877294(-)
174877355-174881918(-)
						
						Potential amino acid sequence
						
							MMNTLGVDNEAKQTIEVLQAELKKTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKNQIATLE
KREERYKAVFAERISVFRKACCSLFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFDYE
SGSTNIVLGHGDYSASSTKVLRMMNTLGVDNEAKQTIEVLQAELKKTKERLQAVEELKGQTDPG
TVVDANIAEKLAQLKNQIATLEKREERYKAVFAERISVFRKACCSLFGYKIVMNDQQQSNGIPV
TRFILQSVYAQSDDEKLEFDYESGSTNIVLGHGDYSASSTKVLRMMNTLGVDNEAKQTIEVLQA
ELKKTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKNQIATLEKREERYKAVFAERISVFRKA
CCSLFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFDYESGSTNIVLGHGDYSASSTKV
LRMMNTLGVDNEAKQTIEVLQAELKKTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKNQIAT
LEKREERYKAVFAERISVFRKACCSLFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFD
YESGSTNIV(-)
MPKAMMKSLSLTMNQEALISC*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	174881876-174877294(-) 174877355-174881918(-)
Potential amino acid sequence	MMNTLGVDNEAKQTIEVLQAELKKTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKNQIATLE KREERYKAVFAERISVFRKACCSLFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFDYE SGSTNIVLGHGDYSASSTKVLRMMNTLGVDNEAKQTIEVLQAELKKTKERLQAVEELKGQTDPG TVVDANIAEKLAQLKNQIATLEKREERYKAVFAERISVFRKACCSLFGYKIVMNDQQQSNGIPV TRFILQSVYAQSDDEKLEFDYESGSTNIVLGHGDYSASSTKVLRMMNTLGVDNEAKQTIEVLQA ELKKTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKNQIATLEKREERYKAVFAERISVFRKA CCSLFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFDYESGSTNIVLGHGDYSASSTKV LRMMNTLGVDNEAKQTIEVLQAELKKTKERLQAVEELKGQTDPGTVVDANIAEKLAQLKNQIAT LEKREERYKAVFAERISVFRKACCSLFGYKIVMNDQQQSNGIPVTRFILQSVYAQSDDEKLEFD YESGSTNIV(-) MPKAMMKSLSLTMNQEALISC*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d042639_circ_g.5

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