Splice junction sequence |
TTGCAGCAAATCACTAAAAGCCTATTTCATGAGTACCTGATCCCGGAATACAGTCAATCCTTCT TTCAGAGTGAGCTGGAACCAATCACGACAAGTCACTtgttgaaagaaggtcatctttgagttga agggcaagctccttcttaataaaggtacggacagcatgaactgcatcaggatctgcaactggca tcatatcc
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 1095 Transcript exons: 28174904-28175050,28175129-28175267,28175346-28175494,28 175800-28175983,28176193-28176273,28176346-28176455,2817 6694-28176750,28176831-28176842,28177137-28177159,281772 52-28177299,28177408-28177488,28177568-28177631 TGTTGAAAGAAGGTCATCTTTGAGTTGAAGGGCAAGCTCCTTCTTAATAAAGGTACGGACAGCA TGAACTGCATCAGGATCTGCAACTGGCATCATATCCATAATCTCCCCTTGACCCGGCAAAGTTA TCGCTTTCGCAATGAATTCTTTATCCAAGCTTGTGTTCCGCAGGATTGATCTAAGTCCATCAAC AAATTTAGGGTTCAGGGCCAGTGTTTTCTGTTGCTGGAAGTCAGCTACAAGACTGAGCATCAGT TTACGTGACAGCACCTGACCAGCTTCCCACCTGTTAAATTCATCCGAATCATTGGCAAGTAGGA AAAACAAGTCACTCTCAGTCAGATCAGAATCAAGACGAACAGGAGCACTGTATCCCCTCAACAA GGAAGGCACTGGTTTCTCAGGTATGTTGTTAAATATGAATTCTTCCTCCTTCTTATTAAATTGA AGAACAGTAGTGAAGACTGGCTGGCCATCACTAGTGAGTGATTGGAGCATCCCATCACTGTAAA TGGAAGTTAGGGGCATATCCTTTCCGGTAGAATCAACAAGTCCGACAGCAATAGGAATGAACAT CGGCTCTTTAACTGGTTGGCCAGGGGTAGGTGGCACTTCTTGACTAAATTTCAGAGAAAATGTC TGAGAACTTGCATCGTATGAAGAGCTCACTTTAACAGTTGGAGTACCTGCCTGAGAGTACCATT GTAAAAAGTTTGGCAGCTGGGTGTTATTTGCATCACACATTGCAGCATAAAAGTCTTCACAAGT CACAGCTTGCCCGTCGTGCCTTTGGAAGTAAAGATCCATGCCCTTTCGAAACCCTGAAGCTCCA AACATGGTCTTGTACATTCTAACAACTTCAGCACCCTTTTCATAAACTCACCGGTATAAAAATT GTCCATCTTGATATACGAATGCGGACGAATAGGATGCGCCATAGGGCCAGCATCCTGTGGAAAT TGATAGGTCCTGAGTTTAGAAACATCGGCTATACGTTTTACTGTGCGACAACCAAGATCTGATG AGAATTCCTGATCCCGGAATACAGTCAATCCTTCTTTCAGAGTGAGCTGGAACCAATCACGACA AGTCACT
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Genomic sequence |
TGTTGAAAGAAGGTCATCTTTGAGTTGAAGGGCAAGCTCCTTCTTAATAAAGGTACGGACAGCA TGAACTGCATCAGGATCTGCAACTGGCATCATATCCATAATCTCCCCTTGACCCGGCAAAGTTA TCGCTTTCGCAATGAATTCCTAAAAGAACACATGTTAGACATTTTACAGTTGAATTCCGTATGA TAAAATCATAGTAGCATCAGAAAAAAAAAATACTTTATCCAAGCTTGTGTTCCGCAGGATTGAT CTAAGTCCATCAACAAATTTAGGGTTCAGGGCCAGTGTTTTCTGTTGCTGGAAGTCAGCTACAA GACTGAGCATCAGTTTACGTGACAGCACCTGACCAGCTTCCCACCTAAGGAATGCAAGAATTCT CAGATTAAAAATCTCCAATAAAAGAGAAGATGACTTAAAACAGGAAACAGAGAGCAACCTGTTA AATTCATCCGAATCATTGGCAAGTAGGAAAAACAAGTCACTCTCAGTCAGATCAGAATCAAGAC GAACAGGAGCACTGTATCCCCTCAACAAGGAAGGCACTGGTTTCTCAGGTATGTTGTTAAATAT GAATTCTTCCTCCTTCTGAAAGATGAAAAAAATGTCTCATTCAGCCATTTTGAAGATCAGACAA GAACATGTAATGTCTGAACGCGAATATAAAAATTGCAGGTTGATGTCTTTACACATCTCAACCA CGTGATCCTGACTAAGGCACAATTCTTAGTACTTTCTATAAAAATCAAAGTATAGCAAGAGTTC AAAATGATAATCTCACAAATGACTTAATTGCATGGCATGCAAGGTTCATAATCCAAAGAAATCA ACTTGTGGCCCTGAAGTTGCCATTGAAGAGGAATTTTTGACTGGAAAATAATCAGTTCTTATAC CTTATTAAATTGAAGAACAGTAGTGAAGACTGGCTGGCCATCACTAGTGAGTGATTGGAGCATC CCATCACTGTAAATGGAAGTTAGGGGCATATCCTTTCCGGTAGAATCAACAAGTCCGACAGCAA TAGGAATGAACATCGGCTCTTTAACTGGTTGGCCAGGGGTAGGTGGCACTTCTTGACTAAGATA TTTAAAAGGACGGAAGGAATTAGTTGAAAATATTCTAATTTCACAAATTATCTATAGAAGGCAG AAAAGGAAGAAGCAAAATATCTATAATCCGTGGATTAAAAACATGAACGGAAAATCAAGCAATA CAGAAAAAGAATCATAAACTGGGTTAACTCTTTAAGTGAAAGTAACTAAAAACTTGGTAGTGTA GAAGCTCACCTAAATTTCAGAGAAAATGTCTGAGAACTTGCATCGTATGAAGAGCTCACTTTAA CAGTTGGAGTACCTGCCTGAGAGTACCTATTGCATGGTTGTTTTAAGATCAGATTGTGCTTGCA ACATGTGCATCGTTGAAAGATAGATGTCTAGTACCATTGTAAAAAGTTTGGCAGCTGGGTGTTA TTTGCATCACACATTGCAGCATAAAAGTCTTCACAAGTCACAGCTTGCCCGTCGTGCCTTTGGA AGTAAAGATCCATGCCCTGTGCAGGAGATACAAACTGTTAACTAAACAGAACGAGCAGATAACA CACGTTTGATAACTGAAGAAAAGAGACAGATCTCATGAAGATTCTCATTCTTTGGTGCTTCCTT TTTTTTTTGCCAAAAGATAACAAAGCAATCGGTTTTCTCATTTCTTTTATTTTCATATATTTAA GCCCACAGCACCACCATGGGAGAAAAGAAATCATCATCATGCTTTCTGCATTTAACTTTTACCT TTCGAAACCCTGAAGCTCCAAACATGGTCTTGTACATTCTAACAACTTCAGCACCCTACAAGTA CATATCCACAAATTACATCCCACTGGGGTTAGGGGTCAAAAGTGAATAAGAAAACATTGGATCA AACGAACCTTTTCATAAACCTGTGATGAAATCCCATAATCATTGGATGAAAAAGTAGAAAGCAG CAAAAGAAAATGTCAGAACGTTCCAGGATTTCTTTAGACAAAAGAATTCCCATACAACTTTATT GAAAGCTAATTGAACAGAACAGAAAACATACCGTTACTGCCAGGTTTTTCACGTTCAAATCACC ACACAAGATTCAACAAATAATAAGGTTGGAGGTTCACCAGGGCATAAAATGATTGAAAATAATT AGCTAATGATGTAGTACTTCTCATTAGATGCACATCATACTTCACAGACAGAGCAACTCACCGG TATAAAAATTGTCCATCTGCCAGTAAAATTAGAAGAATTAATATCAGATCTGTATGGTGGCTAA AAATCACAAAGTAGTTACAATAACTGACAGTTAAGTATTGTCACCTTGATATACGAATGCGGAC GAATAGGATGCGCCATAGGGCCAGCATCCTGGATATCAGGGAGGAAAGTAATGATTTAAAACAA GAAAACAAATGTAACTGCCATCAAACCAATTAGAATCCAGTACTAGTGAAGGGAAATTTAAAGA AACACAACCTGTGGAAATTGATAGGTCCTGAGTTTAGAAACATCGGCTATACGTTTTACTGTGC GACAACCAAGATCTGATGAGAATTCCTGCAGATTCAATTTATTAACAGAGCACGATAAAACCCA AACATTGCAGCAAATCACTAAAAGCCTATTTCATGAGTACCTGATCCCGGAATACAGTCAATCC TTCTTTCAGAGTGAGCTGGAACCAATCACGACAAGTCACT |