Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os06g0127000_circ_g.4 |
ID in PlantcircBase | osa_circ_029480 |
Alias | Os06circ01817 |
Organism | Oryza sativa |
Position | chr6: 1426828-1426951 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os06g0127000 |
Parent gene annotation |
Peroxisomal biogenesis factor 11 family protein. (Os06t0127000-0 1);Peroxisomal biogenesis factor 11 family protein. (Os06t012700 0-02);Peroxisomal biogenesis factor 11 family protein. (Os06t012 7000-03);Peroxisomal protein, Response to abscisic acid (ABA), h ydrogen peroxide, and salt (Os06t0127000-04) |
Parent gene strand | + |
Alternative splicing | Os06g0127000_circ_g.2 Os06g0127000_circ_g.3 Os06g0127000_circ_g.5 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | Os06t0127000-01:1 Os06t0127000-04:1 Os06t0127000-03:1 Os06t0127000-02:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.179438575 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |