Splice junction sequence |
ATAGCGATTCATGTAGCTCACCATCATTAATCTCTAATATTGGTCGCTTACGCTTAAGGCGTGC ACAAACCAGAGATTTTCCATCAGGCATAGACATAATcttatattctcacagaaatgagctgatt tagctctatccaccgcagttagcagactatgcaaaggctctggaggtggcttgtaggaaggcaa gataacac
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 272 Transcript exons: 16869310-16869352,16869372-16869472,16870579-16870706 CTTATATTCTCACAGAAATGAGCTGATTTAGCTCTATCCACCGAGGCTCTGGAGGTGGCTTGTA GGAAGGCAAGATAACACTTCCTCCTTTGCAGCACTTGTTGTATAACGGTCTTGTTGTGTGACGC CGTCGGTCGATGCGCTGCTGTGGGGAAGTCATCGGCATCGTTTGATAGCGATTCATGTAGCTCA CCATCATTAATCTCTAATATTGGTCGCTTACGCTTAAGGCGTGCACAAACCAGAGATTTTCCAT CAGGCATAGACATAAT
Transcript length: 291 Transcript exons: 16869310-16869460,16870567-16870706 CTTATATTCTCACAGAAATGAGCTGATTTAGCTCTATCCACCGCAGTTAGCAGACTATGCAAAG GCTCTGGAGGTGGCTTGTAGGAAGGCAAGATAACACTTCCTCCTTTGCAGCACTTGTTGTATAA CGGTCTTGTTGTGTGACGCCGTCCTGAAATTGAAGGCTGTGGGGAAGTCATCGGCATCGTTTGA TAGCGATTCATGTAGCTCACCATCATTAATCTCTAATATTGGTCGCTTACGCTTAAGGCGTGCA CAAACCAGAGATTTTCCATCAGGCATAGACATAAT
Transcript length: 300 Transcript exons: 16869310-16869486,16870584-16870706 CTTATATTCTCACAGAAATGAGCTGATTTAGCTCTATCCACCGCAGTTAGCAGACTATGCAAAG GCTCTGGAGGTGGCTTGTAGGAAGGCAAGATAACACTTCCTCCTTTGCAGCACTTGTTGTATAA CGGTCTTGTTGTGTGACGCCGTCGGTCGATGCGCTCCTCATACCAAAATGGGGAAGTCATCGGC ATCGTTTGATAGCGATTCATGTAGCTCACCATCATTAATCTCTAATATTGGTCGCTTACGCTTA AGGCGTGCACAAACCAGAGATTTTCCATCAGGCATAGACATAAT
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Genomic sequence |
CTTATATTCTCACAGAAATGAGCTGATTTAGCTCTATCCACCGCAGTTAGCAGACTATGCAAAG GCTCTGGAGGTGGCTTGTAGGAAGGCAAGATAACACTTCCTCCTTTGCAGCACTTGTTGTATAA CGGTCTTGTTGTGTGACGCCGTCGGTCGATGCGCTCCTCATACCAAAATAATGCGCCACAATAA CAACATGTGTGACTTGGTGGACCAAGGTTTAATGGTGAGAAAACAGAGCCTGACAATAAAAAGG GGGAAATGTGAGCTCGAGTTCTCATTCTAGTGTAAAATGTACAAATCTATTGAGGCAAGAGTGT ATACATCGAGACCAGCATCGAGATTGAACATTTACAATCGAGCAGTTTGATGAGCAGTCATGAT CGAACAGTCGAGATAACATCATGATTGAGCATCACATACGAATCGTCTGCGAGAATCAACACAA ATTAGTATGTATCGTGTATGCCTTCTCAATTGCAAGAAACAAAATGTGTTCGAATACATATGGC TTAGAACAAACAGGGAAAATATATGTTAGCGATGGACTTACGGGAATGACCATTTGTAGGGATA GTGGTATGAGAAGACGATGCATCTGCGGAAGGCAATATTAGGATATTAGGCACATAATATGCAA AAGAAAAGGAACTGTAAATTTGAGACACAGTACAGACACCTTTATCATATATGGAAGATGATGA ATGTGCCAACCGTTGTCGCAATACCCTAGAACGCTCTGACATATATGCTTTACGTTTTTTACGT GATTGAGCAGCCATGGCGGAATCTGGGCGAGGAAAATCTGAGGAATAAGTAAGAGAATAGCATT AGGCACATTGCATGGACGCATTGTGGAGGCAAATGGAGCACATTATTTGTGAATGTAATATAAG AATTTTTTAAAAAAAAATTGAGCACAATGGTGGCCATGCCTGTAAGTTGAGTATACGAACGGCG TCGAACAGGCCGGTTAGATCTGAAATTGAAGGCTGTGGGGAAGTCATTCGCGTGGCTTGATGGT GATCCATGTAACTCACCATCATTAGTCTCTATAAGTAAGAGAATAGCATTAGCTACATTGCATG GGTGCACTGTGAAGGCAGATGGAGAACATTATTTGTGAATGTAATATTTTTATTAAGATATAAG AATGAGCAGCAAGCACACAGAGGTGTTTTAAAAGATTAAGCACCATGGTGGCCATATATACCAG CAAGTTGAGTACACAAACGGCGTCGAACAGGCCGGTTAGATCTGAAATTGAAGGCTGTGGGGAA GTCATCGGCATCGTTTGATAGCGATTCATGTAGCTCACCATCATTAATCTCTAATATTGGTCGC TTACGCTTAAGGCGTGCACAAACCAGAGATTTTCCATCAGGCATAGACATAAT |