Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d014033_circ_g.2 |
ID in PlantcircBase | zma_circ_008433 |
Alias | zma_circ_0002056 |
Organism | Zea mays |
Position | chr5: 29820047-29820309 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d014033 |
Parent gene annotation |
Transportin MOS14 |
Parent gene strand | - |
Alternative splicing | Zm00001d014033_circ_g.1 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d014033_T004:1 Zm00001d014033_T003:1 Zm00001d014033_T001:1 Zm00001d014033_T005:2 Zm00001d014033_T006:1 Zm00001d014033_T002:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.270792629 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
29820239-29820067(+) |
Potential amino acid sequence |
MSKILAVFLGKGVVVLRVFNSKTDLSKLGGK*(+) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |