Plant Circular RNA Database

Detail information of Os05g0594700_circ_g.7

			
						 General Information
					
						CircRNA Name
						Os05g0594700_circ_g.7
					
						ID in PlantcircBase
						osa_circ_029225
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr5: 29611423-29614844  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os05g0594700						
					
						Parent gene annotation
						
							Similar to Hv711N16.16 (Fragment). (Os05t0594700-01);Similar to 
Hv711N16.16 (Fragment). (Os05t0594700-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os05g0594700_circ_g.3 Os05g0594700_circ_g.4 Os05g0594700_circ_g.5 Os05g0594700_circ_g.6 Os05g0594700_circ_g.8 Os05g0594700_circ_g.9 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os05t0594700-02:6
Os05t0594700-01:6

General Information
CircRNA Name	Os05g0594700_circ_g.7
ID in PlantcircBase	osa_circ_029225
Alias	NA
Organism	Oryza sativa
Position	chr5: 29611423-29614844 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os05g0594700
Parent gene annotation	Similar to Hv711N16.16 (Fragment). (Os05t0594700-01);Similar to Hv711N16.16 (Fragment). (Os05t0594700-02)
Parent gene strand	+
Alternative splicing	Os05g0594700_circ_g.3 Os05g0594700_circ_g.4 Os05g0594700_circ_g.5 Os05g0594700_circ_g.6 Os05g0594700_circ_g.8 Os05g0594700_circ_g.9
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os05t0594700-02:6 Os05t0594700-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATATTTCTTACTTGGCCTTGTCTATGCTGTGGTGACACCGTTATTGCTTCCTTTCATATTGGTA
TTCTTCGGGCTGGCATATGTTGTCTACCGCCACCAGgttcttgtgcggaatatacctccagatc
ctgatgaatcaattagtgagctcgtggagcatttcttccttgttaatcatcctgatcattatct
aagacacc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1215
Transcript exons: 29611423-29611524,29612126-29612245,29612358-29612438,29
612903-29613243,29613394-29613639,29614520-29614844
GTTCTTGTGCGGAATATACCTCCAGATCCTGATGAATCAATTAGTGAGCTCGTGGAGCATTTCT
TCCTTGTTAATCATCCTGATCATTATCTAAGACACCAGGTGGTTTACAATGCAAATAAACTTGC
TGATCTGGTTGAGAAGAAGAAGAAACTGCAAAATTGGCTTGATTACTACCAGCTCAAGTATGAA
AGAAATCCATCAAAAAGGCCCACCACTAAGACTGGCTTTCTTGGCTGTTTTGGTTCCGAGGTGG
ATGCCATTGAATACTACAAAGCAGAGATTGAGAAGATTGGGAAAGAAGAAGCTGATGAGCGTCA
AAAGATCATGAAGGATCCCCAGTCAGCTGTTCCAGCAGCCTTTGTTTCATTTCGTTCACGGTGG
GGGGCTGCTGTTTGTGCTCAGACACAGCAAACCAGTAATCCAACAGTCTGGATAACTGAATGGG
CTCCAGAACCTCGTGATGTCTACTGGAATAATCTATCCATTCCATTTGTGTCCCTCACAGTTAG
GAGGCTGATAGTTGCTGTGGCATTCTTCTTCCTCAACTTTTTTTATGTCATTCCAATAGCATTC
GTGCAATCTCTTGCAAGCCTTGAAGGAATAGAAAAGGCGCTTCCATTTCTGAAACCCTTAATCA
AAATTGATGTCATCAAATCATTCATCCAAGGTTTTCTTCCAGGAATTGCTTTGAAGGTCTTCCT
TATATTGCTTCCAACTATACTGATGTTTATGTCTAAGTTTGAAGGATTAATATCACAGTCATCA
CTGGAGCGAAGATCTGCATCTAAATATTATATCTTCTTGTTCTTCAATGTATTTTTGGGAAGCA
TCGTTACAGGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAAATACC
GAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCATAACATATGTAATGGTTGAC
GGTTGGACTGGTGTAGCTGGTGAAATATTGAGATTGAGGGCACTTATAATCTTCCATTTGAAAA
ACTTTTTCTTGGTGAAGACTGAAAAGGACAGAGAAGAGGCAATGGATCCTGGTAGTATCTGTTT
TGATTGGTGTGAACCACGTATACAGCTATATTTCTTACTTGGCCTTGTCTATGCTGTGGTGACA
CCGTTATTGCTTCCTTTCATATTGGTATTCTTCGGGCTGGCATATGTTGTCTACCGCCACCAG
						
					

						Genomic sequence
						
							GTTCTTGTGCGGAATATACCTCCAGATCCTGATGAATCAATTAGTGAGCTCGTGGAGCATTTCT
TCCTTGTTAATCATCCTGATCATTATCTAAGACACCAGGTAATCTTTGGTAAAAATTTGTGGAT
AACTAAGTCAGATGTAGTTCTGTTGCTTTTCTCTTCTGGGGGTTTCAACAGGTCATCATCTGCT
TAGGTAGGAGCTGTGTTTCTAGTTATGCTGATTGGCCTAATGCAAATAGATTTTTTTTCTACTC
AACAGAACCCCCTTCATATATTATCCTTTTCCCACAAATTATTGATGGTTTCAAATGAACCTAA
TATTAATGTTTGCTAGTTTCATGTTGAGATTTTTTCCCCCAGATTCTGAGAATAGTCCACATAA
TAGCCTACCCACAGATTATTTGGATATTAATACATAAATATTTTGGTTTTGCCAAGTAACAGGA
AAGTTATGATCTCTTGGTTATCTAGATTTTCATTTAAATAATCATATTCATATGTTAAAGGGTC
TAAAAACTGTCTCTCTGTGCTAACACTTCACAGTGCTAATTGCTGAATGAGATTTAGAAGGGTC
ATATCCAAATTTGTGTATCATATGCACTTGGGTTTTCTACCCTGACTTCATTGATTTTTTTATT
CTTCCTTATACTAATTACTGTATTTATTCCGTCCTTTTTCTGGCCGATTGTCTATATCTATAGG
TGGTTTACAATGCAAATAAACTTGCTGATCTGGTTGAGAAGAAGAAGAAACTGCAAAATTGGCT
TGATTACTACCAGCTCAAGTATGAAAGAAATCCATCAAAAAGGCCCACCACTAAGGTTAGTCTG
CCATATGGACCTTGATCAATTTATTTTTCATTTCAATTATAATATTACATTAGGATCTTTTTTC
TTTTTAATTCTCTGTCCCCCTGTTGGATTTTTGTTCCAGACTGGCTTTCTTGGCTGTTTTGGTT
CCGAGGTGGATGCCATTGAATACTACAAAGCAGAGATTGAGAAGATTGGGAAAGAAGTAAGTTG
TACTCCCTCCGTACCGTAATATAAGGGATTTTGACTTTTTGCTTGCACTGTTTGACCACTCGTC
TTATTCAAAAAATTTGTGCAAATATAAAAAACGAAAAGTTGTGCTTAAAGTACTTTGGATAATA
AAGCAAGTCACAAATAAAATAAATAATAATTCCAATTTTTTTTTAATAAGACGAGTGGCATTTT
TGTCTATTAATTCCAAATAAATAATAATCCCTTATATTACGGGACGGAGGGAGTAGTATTTTTG
TCTATATAATCATTGGACCATTCGGCATTGTCCATTTTTTCTGATTGAGTTGTATCATTCTATG
AACATGGGTTTGCACAATCGATTCTTTTTTAGGATTAGTATTATGTCTAAGCATCACACATTCA
CACCTTGTGGGAGTTTAATTTGTTTACAGCTAACAGTCAGATAACAATAAATTCATGTGTAACA
ACATGCAGGAAGCTGATGAGCGTCAAAAGATCATGAAGGATCCCCAGTCAGCTGTTCCAGCAGC
CTTTGTTTCATTTCGTTCACGGTGGGGGGCTGCTGTTTGTGCTCAGACACAGCAAACCAGTAAT
CCAACAGTCTGGATAACTGAATGGGCTCCAGAACCTCGTGATGTCTACTGGAATAATCTATCCA
TTCCATTTGTGTCCCTCACAGTTAGGAGGCTGATAGTTGCTGTGGCATTCTTCTTCCTCAACTT
TTTTTATGTCATTCCAATAGCATTCGTGCAATCTCTTGCAAGCCTTGAAGGAATAGAAAAGGCG
CTTCCATTTCTGAAACCCTTAATCAAAATGTAAGTGTTTCTTCATGTGTTGATTATTTATACTA
TTATTGCATTTCCATGATTTATTCAGCGTGTAATTAATTTGGGTACATTAGACATATGGTTATC
TTCTGCTATTCTTTTGAAATGCCCTGATAAATCTTGTTGACTATTGTGCAGTGATGTCATCAAA
TCATTCATCCAAGGTTTTCTTCCAGGAATTGCTTTGAAGGTCTTCCTTATATTGCTTCCAACTA
TACTGATGTTTATGTCTAAGTTTGAAGGATTAATATCACAGTCATCACTGGAGCGAAGATCTGC
ATCTAAATATTATATCTTCTTGTTCTTCAATGTATTTTTGGGAAGCATCGTTACAGGATCTGCT
TTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAGTAAGTACTCCTATGCCGCCAAC
TCTACCGACTTGAAAGTTTAGAGATTATATACATGCTTGGTTGTTCATTTGAGTCTTCCCATCT
TTTAATAGGATGCAGTTTATTTTTCCTGCTTCGCGGATCTCTGTTTGTTGACAATTGTATTTTT
AGCAATTAATTATGGGAGAACACAGAAAAATCTGGTTCTTGTCGGAGATCACTTTGTTCATGCC
GGCTGTCAAATAGATACCAAGTTCTTAATTCTGTTTTGATTAGTACTGTGGATTATATATTCAG
GAGCTACACTTTGTTTGAATATTTAGACACATAGGCTAAATCAAATATGAAAAAATGGGACCAA
TCTAGGAAGGACTAGATTGATTTTGAATTAAGGAGGGGGTGAGGCTCGAACCCGGACCGGCTAG
CTCGCAGCTTGCGTTGCTAGCCGGGAAGGCCCCGGGCCTTTCTCCTTAATCAAATATGTCAAGC
AGTGAATTATGATATACATTCTTATTAAATAAAACATGTGCTGGTGGTTCAAATAACATCATGA
ACTCGTGATATATTGGTTCTTAAGCTATCTTAGAAATAGATAAATTCTTTTGGTTACAGTGAGT
TAGACATAAATAGCAACATAATGATGCTTAATAGGCAAAAGGGGGGCCATTTGTTGATAGGCTA
ACTCTGTAGATGCAGAGATTTTGGCATCAAGGCAAACGCCAAAGCATGGGCCTCAGATACTTAC
CTCGTGGAAACTCAGATCGTATTTATGCTTTCACGTACCGATATTTATGTCCTGCTATTTGTCT
GTTTATTTTACAACTCATTCTTCACATTCTCTGATTGAAACCAAATGATCATTACAATTTGCAG
CAAGTCTAAATTAGTTCTTTTGCAGAATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGC
GACTTTTTTCATAACATATGTAATGGTTGACGGTTGGACTGGTGTAGCTGGTGAAATATTGAGA
TTGAGGGCACTTATAATCTTCCATTTGAAAAACTTTTTCTTGGTGAAGACTGAAAAGGACAGAG
AAGAGGCAATGGATCCTGGTAGTATCTGTTTTGATTGGTGTGAACCACGTATACAGCTATATTT
CTTACTTGGCCTTGTCTATGCTGTGGTGACACCGTTATTGCTTCCTTTCATATTGGTATTCTTC
GGGCTGGCATATGTTGTCTACCGCCACCAG
						
					

			
		

Sequences
Splice junction sequence	ATATTTCTTACTTGGCCTTGTCTATGCTGTGGTGACACCGTTATTGCTTCCTTTCATATTGGTA TTCTTCGGGCTGGCATATGTTGTCTACCGCCACCAGgttcttgtgcggaatatacctccagatc ctgatgaatcaattagtgagctcgtggagcatttcttccttgttaatcatcctgatcattatct aagacacc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1215 Transcript exons: 29611423-29611524,29612126-29612245,29612358-29612438,29 612903-29613243,29613394-29613639,29614520-29614844 GTTCTTGTGCGGAATATACCTCCAGATCCTGATGAATCAATTAGTGAGCTCGTGGAGCATTTCT TCCTTGTTAATCATCCTGATCATTATCTAAGACACCAGGTGGTTTACAATGCAAATAAACTTGC TGATCTGGTTGAGAAGAAGAAGAAACTGCAAAATTGGCTTGATTACTACCAGCTCAAGTATGAA AGAAATCCATCAAAAAGGCCCACCACTAAGACTGGCTTTCTTGGCTGTTTTGGTTCCGAGGTGG ATGCCATTGAATACTACAAAGCAGAGATTGAGAAGATTGGGAAAGAAGAAGCTGATGAGCGTCA AAAGATCATGAAGGATCCCCAGTCAGCTGTTCCAGCAGCCTTTGTTTCATTTCGTTCACGGTGG GGGGCTGCTGTTTGTGCTCAGACACAGCAAACCAGTAATCCAACAGTCTGGATAACTGAATGGG CTCCAGAACCTCGTGATGTCTACTGGAATAATCTATCCATTCCATTTGTGTCCCTCACAGTTAG GAGGCTGATAGTTGCTGTGGCATTCTTCTTCCTCAACTTTTTTTATGTCATTCCAATAGCATTC GTGCAATCTCTTGCAAGCCTTGAAGGAATAGAAAAGGCGCTTCCATTTCTGAAACCCTTAATCA AAATTGATGTCATCAAATCATTCATCCAAGGTTTTCTTCCAGGAATTGCTTTGAAGGTCTTCCT TATATTGCTTCCAACTATACTGATGTTTATGTCTAAGTTTGAAGGATTAATATCACAGTCATCA CTGGAGCGAAGATCTGCATCTAAATATTATATCTTCTTGTTCTTCAATGTATTTTTGGGAAGCA TCGTTACAGGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAAATACC GAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCATAACATATGTAATGGTTGAC GGTTGGACTGGTGTAGCTGGTGAAATATTGAGATTGAGGGCACTTATAATCTTCCATTTGAAAA ACTTTTTCTTGGTGAAGACTGAAAAGGACAGAGAAGAGGCAATGGATCCTGGTAGTATCTGTTT TGATTGGTGTGAACCACGTATACAGCTATATTTCTTACTTGGCCTTGTCTATGCTGTGGTGACA CCGTTATTGCTTCCTTTCATATTGGTATTCTTCGGGCTGGCATATGTTGTCTACCGCCACCAG
Genomic sequence	GTTCTTGTGCGGAATATACCTCCAGATCCTGATGAATCAATTAGTGAGCTCGTGGAGCATTTCT TCCTTGTTAATCATCCTGATCATTATCTAAGACACCAGGTAATCTTTGGTAAAAATTTGTGGAT AACTAAGTCAGATGTAGTTCTGTTGCTTTTCTCTTCTGGGGGTTTCAACAGGTCATCATCTGCT TAGGTAGGAGCTGTGTTTCTAGTTATGCTGATTGGCCTAATGCAAATAGATTTTTTTTCTACTC AACAGAACCCCCTTCATATATTATCCTTTTCCCACAAATTATTGATGGTTTCAAATGAACCTAA TATTAATGTTTGCTAGTTTCATGTTGAGATTTTTTCCCCCAGATTCTGAGAATAGTCCACATAA TAGCCTACCCACAGATTATTTGGATATTAATACATAAATATTTTGGTTTTGCCAAGTAACAGGA AAGTTATGATCTCTTGGTTATCTAGATTTTCATTTAAATAATCATATTCATATGTTAAAGGGTC TAAAAACTGTCTCTCTGTGCTAACACTTCACAGTGCTAATTGCTGAATGAGATTTAGAAGGGTC ATATCCAAATTTGTGTATCATATGCACTTGGGTTTTCTACCCTGACTTCATTGATTTTTTTATT CTTCCTTATACTAATTACTGTATTTATTCCGTCCTTTTTCTGGCCGATTGTCTATATCTATAGG TGGTTTACAATGCAAATAAACTTGCTGATCTGGTTGAGAAGAAGAAGAAACTGCAAAATTGGCT TGATTACTACCAGCTCAAGTATGAAAGAAATCCATCAAAAAGGCCCACCACTAAGGTTAGTCTG CCATATGGACCTTGATCAATTTATTTTTCATTTCAATTATAATATTACATTAGGATCTTTTTTC TTTTTAATTCTCTGTCCCCCTGTTGGATTTTTGTTCCAGACTGGCTTTCTTGGCTGTTTTGGTT CCGAGGTGGATGCCATTGAATACTACAAAGCAGAGATTGAGAAGATTGGGAAAGAAGTAAGTTG TACTCCCTCCGTACCGTAATATAAGGGATTTTGACTTTTTGCTTGCACTGTTTGACCACTCGTC TTATTCAAAAAATTTGTGCAAATATAAAAAACGAAAAGTTGTGCTTAAAGTACTTTGGATAATA AAGCAAGTCACAAATAAAATAAATAATAATTCCAATTTTTTTTTAATAAGACGAGTGGCATTTT TGTCTATTAATTCCAAATAAATAATAATCCCTTATATTACGGGACGGAGGGAGTAGTATTTTTG TCTATATAATCATTGGACCATTCGGCATTGTCCATTTTTTCTGATTGAGTTGTATCATTCTATG AACATGGGTTTGCACAATCGATTCTTTTTTAGGATTAGTATTATGTCTAAGCATCACACATTCA CACCTTGTGGGAGTTTAATTTGTTTACAGCTAACAGTCAGATAACAATAAATTCATGTGTAACA ACATGCAGGAAGCTGATGAGCGTCAAAAGATCATGAAGGATCCCCAGTCAGCTGTTCCAGCAGC CTTTGTTTCATTTCGTTCACGGTGGGGGGCTGCTGTTTGTGCTCAGACACAGCAAACCAGTAAT CCAACAGTCTGGATAACTGAATGGGCTCCAGAACCTCGTGATGTCTACTGGAATAATCTATCCA TTCCATTTGTGTCCCTCACAGTTAGGAGGCTGATAGTTGCTGTGGCATTCTTCTTCCTCAACTT TTTTTATGTCATTCCAATAGCATTCGTGCAATCTCTTGCAAGCCTTGAAGGAATAGAAAAGGCG CTTCCATTTCTGAAACCCTTAATCAAAATGTAAGTGTTTCTTCATGTGTTGATTATTTATACTA TTATTGCATTTCCATGATTTATTCAGCGTGTAATTAATTTGGGTACATTAGACATATGGTTATC TTCTGCTATTCTTTTGAAATGCCCTGATAAATCTTGTTGACTATTGTGCAGTGATGTCATCAAA TCATTCATCCAAGGTTTTCTTCCAGGAATTGCTTTGAAGGTCTTCCTTATATTGCTTCCAACTA TACTGATGTTTATGTCTAAGTTTGAAGGATTAATATCACAGTCATCACTGGAGCGAAGATCTGC ATCTAAATATTATATCTTCTTGTTCTTCAATGTATTTTTGGGAAGCATCGTTACAGGATCTGCT TTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAGTAAGTACTCCTATGCCGCCAAC TCTACCGACTTGAAAGTTTAGAGATTATATACATGCTTGGTTGTTCATTTGAGTCTTCCCATCT TTTAATAGGATGCAGTTTATTTTTCCTGCTTCGCGGATCTCTGTTTGTTGACAATTGTATTTTT AGCAATTAATTATGGGAGAACACAGAAAAATCTGGTTCTTGTCGGAGATCACTTTGTTCATGCC GGCTGTCAAATAGATACCAAGTTCTTAATTCTGTTTTGATTAGTACTGTGGATTATATATTCAG GAGCTACACTTTGTTTGAATATTTAGACACATAGGCTAAATCAAATATGAAAAAATGGGACCAA TCTAGGAAGGACTAGATTGATTTTGAATTAAGGAGGGGGTGAGGCTCGAACCCGGACCGGCTAG CTCGCAGCTTGCGTTGCTAGCCGGGAAGGCCCCGGGCCTTTCTCCTTAATCAAATATGTCAAGC AGTGAATTATGATATACATTCTTATTAAATAAAACATGTGCTGGTGGTTCAAATAACATCATGA ACTCGTGATATATTGGTTCTTAAGCTATCTTAGAAATAGATAAATTCTTTTGGTTACAGTGAGT TAGACATAAATAGCAACATAATGATGCTTAATAGGCAAAAGGGGGGCCATTTGTTGATAGGCTA ACTCTGTAGATGCAGAGATTTTGGCATCAAGGCAAACGCCAAAGCATGGGCCTCAGATACTTAC CTCGTGGAAACTCAGATCGTATTTATGCTTTCACGTACCGATATTTATGTCCTGCTATTTGTCT GTTTATTTTACAACTCATTCTTCACATTCTCTGATTGAAACCAAATGATCATTACAATTTGCAG CAAGTCTAAATTAGTTCTTTTGCAGAATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGC GACTTTTTTCATAACATATGTAATGGTTGACGGTTGGACTGGTGTAGCTGGTGAAATATTGAGA TTGAGGGCACTTATAATCTTCCATTTGAAAAACTTTTTCTTGGTGAAGACTGAAAAGGACAGAG AAGAGGCAATGGATCCTGGTAGTATCTGTTTTGATTGGTGTGAACCACGTATACAGCTATATTT CTTACTTGGCCTTGTCTATGCTGTGGTGACACCGTTATTGCTTCCTTTCATATTGGTATTCTTC GGGCTGGCATATGTTGTCTACCGCCACCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_015873 						
					
						PMCS
						0.352381183

Conservation Information
Conserved circRNAs	osi_circ_015873
PMCS	0.352381183

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							29612928-29614841(+)
29614826-29611513(+)
						
					

						Potential amino acid sequence
						
							MKDPQSAVPAAFVSFRSRWGAAVCAQTQQTSNPTVWITEWAPEPRDVYWNNLSIPFVSLTVRRL
IVAVAFFFLNFFYVIPIAFVQSLASLEGIEKALPFLKPLIKIDVIKSFIQGFLPGIALKVFLIL
LPTILMFMSKFEGLISQSSLERRSASKYYIFLFFNVFLGSIVTGSALDQLKAYIHQSANEIPRT
IGVAIPMRATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFFLVKTEKDREEAMDPGSICFDW
CEPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQVLVRNIPPDPDESISELVEHFFLV
NHPDHYLRHQVVYNANKLADLVEKKKKLQNWLDYYQLKYERNPSKRPTTKTGFLGCFGSEVDAI
EYYKAEIEKIGKEEADERQKIMKDPQSAVPAAFVSFRSRWGAAVCAQTQQTSNPTVWITEWAPE
PRDVYWNNLSIPFVSLTVRRLIVAVAFFFLNFFYVIPIAFVQSLASLEGIEKALPFLKPLIKID
VIKSFIQGFLPGIALKVFLILLPTILMFMSKFEGLISQSSLERRSASKYYIFLFFNVFLGSIVT
GSALDQLKAYIHQSANEIPRTIGVAIPMRATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFF
LVKTEKDREEAMDPGSICFDWCEPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQVLV
RNIPPDPDESISELVEHFFLVNHPDHYLRHQVVYNANKLADLVEKKKKLQNWLDYYQLKYERNP
SKRPTTKTGFLGCFGSEVDAIEYYKAEIEKIGKEEADERQKIMKDPQSAVPAAFVSFRSRWGAA
VCAQTQQTSNPTVWITEWAPEPRDVYWNNLSIPFVSLTVRRLIVAVAFFFLNFFYVIPIAFVQS
LASLEGIEKALPFLKPLIKIDVIKSFIQGFLPGIALKVFLILLPTILMFMSKFEGLISQSSLER
RSASKYYIFLFFNVFLGSIVTGSALDQLKAYIHQSANEIPRTIGVAIPMRATFFITYVMVDGWT
GVAGEILRLRALIIFHLKNFFLVKTEKDREEAMDPGSICFDWCEPRIQLYFLLGLVYAVVTPLL
LPFILVFFGLAYVVYRHQVLVRNIPPDPDESISELVEHFFLVNHPDHYLRHQVVYNANKLADLV
EKKKKLQNWLDYYQLKYERNPSKRPTTKTGFLGCFGSEVDAIEYYKAEIEKIGKEEADERQKIM
KDPQSAVPAAFVSFRSRWGAAVCAQTQQTSNPTVWITEWAPEPRDVYWNNLSIPFVSLTVRRLI
VAVAFFFLNFFYVIPIAFVQSLASLEGIEKALPFLKPLIKIDVIKSFIQGFLPGIALKVFLILL
PTILMFMSKFEGLISQSSLERRSASKYYIFLFFNVFLGSIVTGSALDQLKAYIHQSANEIPRTI
GVAIPMRATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFFLVKTEKDREEAMDPGSICFDWC
EPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQ(+)
MLSTATRFLCGIYLQILMNQLVSSWSISSLLIILIII*(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	29612928-29614841(+) 29614826-29611513(+)
Potential amino acid sequence	MKDPQSAVPAAFVSFRSRWGAAVCAQTQQTSNPTVWITEWAPEPRDVYWNNLSIPFVSLTVRRL IVAVAFFFLNFFYVIPIAFVQSLASLEGIEKALPFLKPLIKIDVIKSFIQGFLPGIALKVFLIL LPTILMFMSKFEGLISQSSLERRSASKYYIFLFFNVFLGSIVTGSALDQLKAYIHQSANEIPRT IGVAIPMRATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFFLVKTEKDREEAMDPGSICFDW CEPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQVLVRNIPPDPDESISELVEHFFLV NHPDHYLRHQVVYNANKLADLVEKKKKLQNWLDYYQLKYERNPSKRPTTKTGFLGCFGSEVDAI EYYKAEIEKIGKEEADERQKIMKDPQSAVPAAFVSFRSRWGAAVCAQTQQTSNPTVWITEWAPE PRDVYWNNLSIPFVSLTVRRLIVAVAFFFLNFFYVIPIAFVQSLASLEGIEKALPFLKPLIKID VIKSFIQGFLPGIALKVFLILLPTILMFMSKFEGLISQSSLERRSASKYYIFLFFNVFLGSIVT GSALDQLKAYIHQSANEIPRTIGVAIPMRATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFF LVKTEKDREEAMDPGSICFDWCEPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQVLV RNIPPDPDESISELVEHFFLVNHPDHYLRHQVVYNANKLADLVEKKKKLQNWLDYYQLKYERNP SKRPTTKTGFLGCFGSEVDAIEYYKAEIEKIGKEEADERQKIMKDPQSAVPAAFVSFRSRWGAA VCAQTQQTSNPTVWITEWAPEPRDVYWNNLSIPFVSLTVRRLIVAVAFFFLNFFYVIPIAFVQS LASLEGIEKALPFLKPLIKIDVIKSFIQGFLPGIALKVFLILLPTILMFMSKFEGLISQSSLER RSASKYYIFLFFNVFLGSIVTGSALDQLKAYIHQSANEIPRTIGVAIPMRATFFITYVMVDGWT GVAGEILRLRALIIFHLKNFFLVKTEKDREEAMDPGSICFDWCEPRIQLYFLLGLVYAVVTPLL LPFILVFFGLAYVVYRHQVLVRNIPPDPDESISELVEHFFLVNHPDHYLRHQVVYNANKLADLV EKKKKLQNWLDYYQLKYERNPSKRPTTKTGFLGCFGSEVDAIEYYKAEIEKIGKEEADERQKIM KDPQSAVPAAFVSFRSRWGAAVCAQTQQTSNPTVWITEWAPEPRDVYWNNLSIPFVSLTVRRLI VAVAFFFLNFFYVIPIAFVQSLASLEGIEKALPFLKPLIKIDVIKSFIQGFLPGIALKVFLILL PTILMFMSKFEGLISQSSLERRSASKYYIFLFFNVFLGSIVTGSALDQLKAYIHQSANEIPRTI GVAIPMRATFFITYVMVDGWTGVAGEILRLRALIIFHLKNFFLVKTEKDREEAMDPGSICFDWC EPRIQLYFLLGLVYAVVTPLLLPFILVFFGLAYVVYRHQ(+) MLSTATRFLCGIYLQILMNQLVSSWSISSLLIILIII*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os05g0594700_circ_g.7

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