Plant Circular RNA Database

Detail information of Zm00001d039138_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d039138_circ_g.2
					
						ID in PlantcircBase
						zma_circ_009190
					
						Alias
						zma_circ_0002438
					
						Organism
						
							Zea mays						
					
						Position
						
							chr6: 170948896-170952374  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d039138						
					
						Parent gene annotation
						
							GBF-interacting protein 1
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d039138_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d039138_T004:4
Zm00001d039138_T016:6
Zm00001d039138_T010:6
Zm00001d039138_T005:6
Zm00001d039138_T011:6
Zm00001d039138_T008:4
Zm00001d039138_T007:6
Zm00001d039138_T012:6
Zm00001d039138_T003:6
Zm00001d039138_T006:6
Zm00001d039138_T014:6
Zm00001d039138_T013:6
Zm00001d039138_T001:6
Zm00001d039138_T015:5
Zm00001d039138_T009:6
Zm00001d039138_T002:6

General Information
CircRNA Name	Zm00001d039138_circ_g.2
ID in PlantcircBase	zma_circ_009190
Alias	zma_circ_0002438
Organism	Zea mays
Position	chr6: 170948896-170952374 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d039138
Parent gene annotation	GBF-interacting protein 1
Parent gene strand	+
Alternative splicing	Zm00001d039138_circ_g.1
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d039138_T004:4 Zm00001d039138_T016:6 Zm00001d039138_T010:6 Zm00001d039138_T005:6 Zm00001d039138_T011:6 Zm00001d039138_T008:4 Zm00001d039138_T007:6 Zm00001d039138_T012:6 Zm00001d039138_T003:6 Zm00001d039138_T006:6 Zm00001d039138_T014:6 Zm00001d039138_T013:6 Zm00001d039138_T001:6 Zm00001d039138_T015:5 Zm00001d039138_T009:6 Zm00001d039138_T002:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGATCCAGCATTTTCACTATTGCTCACCCATCCTCCTATGATGCATGGTACAATGTCATCATCC
ATGAGCAATACAACTGTTTCTACGCAGCCCCAAGAGactaaagttaatcacgaaacaaggcctc
gacctttccagaaatatacataccgaggatataaggctgtttcagatcgaagtgggcgaggtcg
cattcttc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1497
Transcript exons: 170948896-170948983,170949099-170949216,170950201-170950
805,170951182-170951440,170951511-170951787,170952225-17
0952374
ACTAAAGTTAATCACGAAACAAGGCCTCGACCTTTCCAGAAATATACATACCGAGGATATAAGG
CTGTTTCAGATCGAAGTGGGCGAGACCCTACAGGCGGTTTCAAAGGCCCTGTAAAAAAGGAACC
AGAGATGCAAGCTCCACTAAACTCATCAGCCTTGGATGTCAAGACAAGTGACACTACAGAAATA
TTTTCTGCTACTATCAATGTTGCCCAGACTGATGCTAAGAACACCACTTCTCAGCCTTTATCTA
AAGTGCAGCATGGTTGGGGTGGTATTCCAGGTCGCCCTTCCATGGCTGAAATAGTGAAGATGGG
CAGGCCTCAAGCTAAAGTTGGGAGCAGATCTGTTGCAAGTAGCACTGCGTTGCCAACCGTTGGT
GATTCAGTCATTTCCAATACACCAAATCTTGTGCCTGAGGAATATAACAGAACTGTTTTTGCAT
CAGAAGCAGGCCATGTCGCAGCAGATAAATTGCCAAACGGTGCTGTTGAGGTGCACTCTCTACC
TAAAGATGCTTCCGCATTTGATATGTTACCTTCAGCTGAGGGAACAGATGTTGAAGCCCCTTCC
ATGAGTGCTAATGCACAAGGGTCATCAACGCCAGATGCCAATGAAGATGACATTGAAAAATATG
CAAATTTGGAAGAGGGCAATACAGAAAGCTTGATATCTCCTGGACAAGTTTCTGCTTCTGGTAA
AGATATACAATCAGAATATACTGAAGTTGTCAGCCATGTGGATGAAGGCTCGATAGAGAAAACA
AATGACTTTCAGCTCAATGGCCTTCCATTTGAGCACAACCAAAATCTGAATGGAGACGTGTCTA
CAGCGACAACACAATTTGATCATTTGACTCTGCATGAGGGACCAAAATTGTCCGATGATAATCC
GGCTGTAATAATTCCTGATCATCTTCAGGTTTCGAATGCTGATTGTGCGCATTTGACGTTTGGT
AGTTTTGTGTCTGGAACACTTGATTCATCCTTGACAACAAAACCTCTTGAAAGTCATGGGGATG
CTGCGGCAGTTCCTGATGATGATTCAATTGACCAATCAGATGGCAGGATCCATGACGATGAAGG
CAAGGTGACTTTAGCTACTGATGTTAATGAATATGTTACTTCTGCGGCAAACAGCAACGAGGAG
AATCTTGATATTACATCAGTACAGCAATCTGAAGTCACTAGAGCTGATTTCTTGGATGTCACAA
GCAATACTGAATACAACCTAACATCAACTCCAGATTATGCAACTTCAAGTGCACCGTTGCAAGA
TTCTGCTTCACAGAGTTTACAGGAAAACCGACAATTCCAGAACATCTCTCCTTTCTCAAGCTTC
ATGCAAATGCAAAATGGTCTCCTGCCACCAGCAATTCCACCATTGCGTGAATTTGATCCAGCAT
TTTCACTATTGCTCACCCATCCTCCTATGATGCATGGTACAATGTCATCATCCATGAGCAATAC
AACTGTTTCTACGCAGCCCCAAGAG
						
					

						Genomic sequence
						
							ACTAAAGTTAATCACGAAACAAGGCCTCGACCTTTCCAGAAATATACATACCGAGGATATAAGG
CTGTTTCAGATCGAAGTGGGCGAGGTCGCATTCTTCATTTTGTATTTTTGTGCTATAACTGTTA
TAATGATGTATGGTTTGTAGTTTCCTCAGGATAAATGGTGCTCTCATTTTGTTTTCTCTCTCTT
CATTTCAGCAGACCCTACAGGCGGTTTCAAAGGCCCTGTAAAAAAGGAACCAGAGATGCAAGCT
CCACTAAACTCATCAGCCTTGGATGTCAAGACAAGTGACACTACAGAAATATTTTCTGCTACTA
TGTATGTGCTACTTATTGGTTCCATATATGATTCCTAGCTATATGTTGATTGTTTTGTTAATGT
TTGCCGTTTTCATCGTTTCAAGTCAATGTCTTCTTCATATATCACTGTTGTCCTTTCCTTCATT
TGTTTCTCTTCCTTGTGACTTGTAACTCTTTTTGGATTTCATAGCTAGTCTTACCCAACTTACT
CCAGACTGGTATTGTAGTTTTTGAAACTATTTCATTAGTTTTAGTTATTCCCTTGTACTTACTA
TTTTGCACCATTTGTCCATTTGTCTATTTGATAACTGAAGTACATCAGAAATGGAATAGACATT
TTGGCTGGTTTCCTATTAGACCTTTGATCATAATGGCTATAGTTCATTTCTAGTGTTCTCTTCA
CAAAACAATGTTCAAAGGTGGATAACACAGGTCATATAAGTCAAATATAGTAGGTCCTACAGAA
CAGAGTGTAGTATTTGATAAACCAGAACATAATTGTTGTTTTTTACTTGTCATCCTAGAATGCG
TGCAATTGAAGCATTTATTCTGTCATACGAAAATTAAAGGAGTAGCTTCATCACTAAACGTAGG
CTAAGTGCAATTATATTTTTTGTTATGTTTCACTAATATAATGCTAGAGGAAGGAATAGTAGAA
AAAAGTTTACTTGATATCGTTCTGATGTCCTTCTCTACAAGTAACTTGTTACGGCATTGAAGGA
CCTGATACTTTCTGGCTTGAATATTATGAAAAGATCAACATTTGCAGTATCAGTTCCATATACT
TTGTCTTCATTTCTGTGTCATCTGTTCTGTATTCTTAACTGTTTATATTATTTAGTAACCATTT
TCCAAGGCAAATTGGCAGTGTCTTTGAATTTTGATAATGTATAGTTTCACTCATGCAAATTAAA
TGTGTTCACTTTATCTGGTAATTTGTAAAGGTAGCTTCAAGGCTTCCTTGGCAGGCTTACTAAT
TCTTTTAGGCTAATTATTTTTGCAGCAATGTTGCCCAGACTGATGCTAAGAACACCACTTCTCA
GCCTTTATCTAAAGTGCAGCATGGTTGGGGTGGTATTCCAGGTCGCCCTTCCATGGCTGAAATA
GTGAAGATGGGCAGGCCTCAAGCTAAAGTTGGGAGCAGATCTGTTGCAAGTAGCACTGCGTTGC
CAACCGTTGGTGATTCAGTCATTTCCAATACACCAAATCTTGTGCCTGAGGAATATAACAGAAC
TGTTTTTGCATCAGAAGCAGGCCATGTCGCAGCAGATAAATTGCCAAACGGTGCTGTTGAGGTG
CACTCTCTACCTAAAGATGCTTCCGCATTTGATATGTTACCTTCAGCTGAGGGAACAGATGTTG
AAGCCCCTTCCATGAGTGCTAATGCACAAGGGTCATCAACGCCAGATGCCAATGAAGATGACAT
TGAAAAATATGCAAATTTGGAAGAGGGCAATACAGAAAGCTTGATATCTCCTGGACAAGTTTCT
GCTTCTGGTAAAGATATACAATCAGAATATACTGAAGTTGTCAGCCATGTGGATGAAGGCTCGA
TAGAGAAAACAAATGACTTTCAGCTCAATGGCCTTCCATTTGAGCACAACCAAAGTAAGTCAAA
ATCAGCCTTGCTTTGTCTTACCTGTATTTCCCCATGTTGTCCGGCTTATATGATTCCGATGACC
CTACTTACTAATAAGTAAATTAAGTTGTAAGTTCTTTATTTTATTTATTATGTGTAATTGTGGA
TCTTTTTTCCCTTTTGTTTCCTAATATGTAGGTATCACACATCCCACTTGTTTTTGGATATCAC
ACATGCACACCCCTATGTTGCCATCCTTCTACTACTTTACCTGTTACCTATTATGCCCCTTCTA
AAATAAAATGGGACGATGGCCATCTATTGTGTTACATTGTGAATTGGGTGTTCCTGAAGGTGTT
CATCAAGTTTCTCATTTTGTATTACCGTTTACCTCTTTGATGGCAGATCTGAATGGAGACGTGT
CTACAGCGACAACACAATTTGATCATTTGACTCTGCATGAGGGACCAAAATTGTCCGATGATAA
TCCGGCTGTAATAATTCCTGATCATCTTCAGGTTTCGAATGCTGATTGTGCGCATTTGACGTTT
GGTAGTTTTGTGTCTGGAACACTTGATTCATCCTTGACAACAAAACCTCTTGAAAGTCATGGGG
ATGCTGCGGCAGTTCCTGATGATGATTCAATTGACCAATCAGATGGCAGGTATGTTCCTTTCCT
TTTATTTTCTTAGCTCCATCTTTATCATGTAGCTCTTATAAGCCGTTATTTTTAGGATCCATGA
CGATGAAGGCAAGGTGACTTTAGCTACTGATGTTAATGAATATGTTACTTCTGCGGCAAACAGC
AACGAGGAGAATCTTGATATTACATCAGTACAGCAATCTGAAGTCACTAGAGCTGATTTCTTGG
ATGTCACAAGCAATACTGAATACAACCTAACATCAACTCCAGATTATGCAACTTCAAGTGCACC
GTTGCAAGATTCTGCTTCACAGAGTTTACAGGAAAACCGACAATTCCAGAACATCTCTCCTTTC
TCAAGCTTCATGGTACAGACCCATGCCATGTGTGATGTGTCATCCTAGTTCTAATTGCCGTGAT
ATGTTGCAAATTTCTACGCAATTATGTATATGCAAATTAAGTGTTGTGGTTGCTATTTTGCTTA
TATACTGTCATACTTTACACCTAACTCTTTGTCTTGTCTGTGCCTCTTGGGAGAGACCTCATAA
AAGGTTGACATTGCTTGCTTATTATACTATTGGAAGGCACACTAACTTTTTGAAAAAGAGCACC
CGATTTCTTTTTTTGCAGTTCATATGCTATTATTTATTCTGTTTACTTTGCATTAATGTTCTTT
GCTAACAGCTGGTCTATTATTGTGTGTCTGCAACTAACAGCTGTTTTATTTTTGTGTGTGTCTG
CAACTAACAGCTGTTCTATTGTTGAGTCAGCAACTAACGTCTGTTTTATTATTGTGTGTCTGCA
GCAAATGCAAAATGGTCTCCTGCCACCAGCAATTCCACCATTGCGTGAATTTGATCCAGCATTT
TCACTATTGCTCACCCATCCTCCTATGATGCATGGTACAATGTCATCATCCATGAGCAATACAA
CTGTTTCTACGCAGCCCCAAGAG
						
					

			
		

Sequences
Splice junction sequence	TGATCCAGCATTTTCACTATTGCTCACCCATCCTCCTATGATGCATGGTACAATGTCATCATCC ATGAGCAATACAACTGTTTCTACGCAGCCCCAAGAGactaaagttaatcacgaaacaaggcctc gacctttccagaaatatacataccgaggatataaggctgtttcagatcgaagtgggcgaggtcg cattcttc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1497 Transcript exons: 170948896-170948983,170949099-170949216,170950201-170950 805,170951182-170951440,170951511-170951787,170952225-17 0952374 ACTAAAGTTAATCACGAAACAAGGCCTCGACCTTTCCAGAAATATACATACCGAGGATATAAGG CTGTTTCAGATCGAAGTGGGCGAGACCCTACAGGCGGTTTCAAAGGCCCTGTAAAAAAGGAACC AGAGATGCAAGCTCCACTAAACTCATCAGCCTTGGATGTCAAGACAAGTGACACTACAGAAATA TTTTCTGCTACTATCAATGTTGCCCAGACTGATGCTAAGAACACCACTTCTCAGCCTTTATCTA AAGTGCAGCATGGTTGGGGTGGTATTCCAGGTCGCCCTTCCATGGCTGAAATAGTGAAGATGGG CAGGCCTCAAGCTAAAGTTGGGAGCAGATCTGTTGCAAGTAGCACTGCGTTGCCAACCGTTGGT GATTCAGTCATTTCCAATACACCAAATCTTGTGCCTGAGGAATATAACAGAACTGTTTTTGCAT CAGAAGCAGGCCATGTCGCAGCAGATAAATTGCCAAACGGTGCTGTTGAGGTGCACTCTCTACC TAAAGATGCTTCCGCATTTGATATGTTACCTTCAGCTGAGGGAACAGATGTTGAAGCCCCTTCC ATGAGTGCTAATGCACAAGGGTCATCAACGCCAGATGCCAATGAAGATGACATTGAAAAATATG CAAATTTGGAAGAGGGCAATACAGAAAGCTTGATATCTCCTGGACAAGTTTCTGCTTCTGGTAA AGATATACAATCAGAATATACTGAAGTTGTCAGCCATGTGGATGAAGGCTCGATAGAGAAAACA AATGACTTTCAGCTCAATGGCCTTCCATTTGAGCACAACCAAAATCTGAATGGAGACGTGTCTA CAGCGACAACACAATTTGATCATTTGACTCTGCATGAGGGACCAAAATTGTCCGATGATAATCC GGCTGTAATAATTCCTGATCATCTTCAGGTTTCGAATGCTGATTGTGCGCATTTGACGTTTGGT AGTTTTGTGTCTGGAACACTTGATTCATCCTTGACAACAAAACCTCTTGAAAGTCATGGGGATG CTGCGGCAGTTCCTGATGATGATTCAATTGACCAATCAGATGGCAGGATCCATGACGATGAAGG CAAGGTGACTTTAGCTACTGATGTTAATGAATATGTTACTTCTGCGGCAAACAGCAACGAGGAG AATCTTGATATTACATCAGTACAGCAATCTGAAGTCACTAGAGCTGATTTCTTGGATGTCACAA GCAATACTGAATACAACCTAACATCAACTCCAGATTATGCAACTTCAAGTGCACCGTTGCAAGA TTCTGCTTCACAGAGTTTACAGGAAAACCGACAATTCCAGAACATCTCTCCTTTCTCAAGCTTC ATGCAAATGCAAAATGGTCTCCTGCCACCAGCAATTCCACCATTGCGTGAATTTGATCCAGCAT TTTCACTATTGCTCACCCATCCTCCTATGATGCATGGTACAATGTCATCATCCATGAGCAATAC AACTGTTTCTACGCAGCCCCAAGAG
Genomic sequence	ACTAAAGTTAATCACGAAACAAGGCCTCGACCTTTCCAGAAATATACATACCGAGGATATAAGG CTGTTTCAGATCGAAGTGGGCGAGGTCGCATTCTTCATTTTGTATTTTTGTGCTATAACTGTTA TAATGATGTATGGTTTGTAGTTTCCTCAGGATAAATGGTGCTCTCATTTTGTTTTCTCTCTCTT CATTTCAGCAGACCCTACAGGCGGTTTCAAAGGCCCTGTAAAAAAGGAACCAGAGATGCAAGCT CCACTAAACTCATCAGCCTTGGATGTCAAGACAAGTGACACTACAGAAATATTTTCTGCTACTA TGTATGTGCTACTTATTGGTTCCATATATGATTCCTAGCTATATGTTGATTGTTTTGTTAATGT TTGCCGTTTTCATCGTTTCAAGTCAATGTCTTCTTCATATATCACTGTTGTCCTTTCCTTCATT TGTTTCTCTTCCTTGTGACTTGTAACTCTTTTTGGATTTCATAGCTAGTCTTACCCAACTTACT CCAGACTGGTATTGTAGTTTTTGAAACTATTTCATTAGTTTTAGTTATTCCCTTGTACTTACTA TTTTGCACCATTTGTCCATTTGTCTATTTGATAACTGAAGTACATCAGAAATGGAATAGACATT TTGGCTGGTTTCCTATTAGACCTTTGATCATAATGGCTATAGTTCATTTCTAGTGTTCTCTTCA CAAAACAATGTTCAAAGGTGGATAACACAGGTCATATAAGTCAAATATAGTAGGTCCTACAGAA CAGAGTGTAGTATTTGATAAACCAGAACATAATTGTTGTTTTTTACTTGTCATCCTAGAATGCG TGCAATTGAAGCATTTATTCTGTCATACGAAAATTAAAGGAGTAGCTTCATCACTAAACGTAGG CTAAGTGCAATTATATTTTTTGTTATGTTTCACTAATATAATGCTAGAGGAAGGAATAGTAGAA AAAAGTTTACTTGATATCGTTCTGATGTCCTTCTCTACAAGTAACTTGTTACGGCATTGAAGGA CCTGATACTTTCTGGCTTGAATATTATGAAAAGATCAACATTTGCAGTATCAGTTCCATATACT TTGTCTTCATTTCTGTGTCATCTGTTCTGTATTCTTAACTGTTTATATTATTTAGTAACCATTT TCCAAGGCAAATTGGCAGTGTCTTTGAATTTTGATAATGTATAGTTTCACTCATGCAAATTAAA TGTGTTCACTTTATCTGGTAATTTGTAAAGGTAGCTTCAAGGCTTCCTTGGCAGGCTTACTAAT TCTTTTAGGCTAATTATTTTTGCAGCAATGTTGCCCAGACTGATGCTAAGAACACCACTTCTCA GCCTTTATCTAAAGTGCAGCATGGTTGGGGTGGTATTCCAGGTCGCCCTTCCATGGCTGAAATA GTGAAGATGGGCAGGCCTCAAGCTAAAGTTGGGAGCAGATCTGTTGCAAGTAGCACTGCGTTGC CAACCGTTGGTGATTCAGTCATTTCCAATACACCAAATCTTGTGCCTGAGGAATATAACAGAAC TGTTTTTGCATCAGAAGCAGGCCATGTCGCAGCAGATAAATTGCCAAACGGTGCTGTTGAGGTG CACTCTCTACCTAAAGATGCTTCCGCATTTGATATGTTACCTTCAGCTGAGGGAACAGATGTTG AAGCCCCTTCCATGAGTGCTAATGCACAAGGGTCATCAACGCCAGATGCCAATGAAGATGACAT TGAAAAATATGCAAATTTGGAAGAGGGCAATACAGAAAGCTTGATATCTCCTGGACAAGTTTCT GCTTCTGGTAAAGATATACAATCAGAATATACTGAAGTTGTCAGCCATGTGGATGAAGGCTCGA TAGAGAAAACAAATGACTTTCAGCTCAATGGCCTTCCATTTGAGCACAACCAAAGTAAGTCAAA ATCAGCCTTGCTTTGTCTTACCTGTATTTCCCCATGTTGTCCGGCTTATATGATTCCGATGACC CTACTTACTAATAAGTAAATTAAGTTGTAAGTTCTTTATTTTATTTATTATGTGTAATTGTGGA TCTTTTTTCCCTTTTGTTTCCTAATATGTAGGTATCACACATCCCACTTGTTTTTGGATATCAC ACATGCACACCCCTATGTTGCCATCCTTCTACTACTTTACCTGTTACCTATTATGCCCCTTCTA AAATAAAATGGGACGATGGCCATCTATTGTGTTACATTGTGAATTGGGTGTTCCTGAAGGTGTT CATCAAGTTTCTCATTTTGTATTACCGTTTACCTCTTTGATGGCAGATCTGAATGGAGACGTGT CTACAGCGACAACACAATTTGATCATTTGACTCTGCATGAGGGACCAAAATTGTCCGATGATAA TCCGGCTGTAATAATTCCTGATCATCTTCAGGTTTCGAATGCTGATTGTGCGCATTTGACGTTT GGTAGTTTTGTGTCTGGAACACTTGATTCATCCTTGACAACAAAACCTCTTGAAAGTCATGGGG ATGCTGCGGCAGTTCCTGATGATGATTCAATTGACCAATCAGATGGCAGGTATGTTCCTTTCCT TTTATTTTCTTAGCTCCATCTTTATCATGTAGCTCTTATAAGCCGTTATTTTTAGGATCCATGA CGATGAAGGCAAGGTGACTTTAGCTACTGATGTTAATGAATATGTTACTTCTGCGGCAAACAGC AACGAGGAGAATCTTGATATTACATCAGTACAGCAATCTGAAGTCACTAGAGCTGATTTCTTGG ATGTCACAAGCAATACTGAATACAACCTAACATCAACTCCAGATTATGCAACTTCAAGTGCACC GTTGCAAGATTCTGCTTCACAGAGTTTACAGGAAAACCGACAATTCCAGAACATCTCTCCTTTC TCAAGCTTCATGGTACAGACCCATGCCATGTGTGATGTGTCATCCTAGTTCTAATTGCCGTGAT ATGTTGCAAATTTCTACGCAATTATGTATATGCAAATTAAGTGTTGTGGTTGCTATTTTGCTTA TATACTGTCATACTTTACACCTAACTCTTTGTCTTGTCTGTGCCTCTTGGGAGAGACCTCATAA AAGGTTGACATTGCTTGCTTATTATACTATTGGAAGGCACACTAACTTTTTGAAAAAGAGCACC CGATTTCTTTTTTTGCAGTTCATATGCTATTATTTATTCTGTTTACTTTGCATTAATGTTCTTT GCTAACAGCTGGTCTATTATTGTGTGTCTGCAACTAACAGCTGTTTTATTTTTGTGTGTGTCTG CAACTAACAGCTGTTCTATTGTTGAGTCAGCAACTAACGTCTGTTTTATTATTGTGTGTCTGCA GCAAATGCAAAATGGTCTCCTGCCACCAGCAATTCCACCATTGCGTGAATTTGATCCAGCATTT TCACTATTGCTCACCCATCCTCCTATGATGCATGGTACAATGTCATCATCCATGAGCAATACAA CTGTTTCTACGCAGCCCCAAGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.132196179

Conservation Information
Conserved circRNAs	NA
PMCS	0.132196179

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							170949144-170952371(+)
						
					

						Potential amino acid sequence
						
							MQAPLNSSALDVKTSDTTEIFSATINVAQTDAKNTTSQPLSKVQHGWGGIPGRPSMAEIVKMGR
PQAKVGSRSVASSTALPTVGDSVISNTPNLVPEEYNRTVFASEAGHVAADKLPNGAVEVHSLPK
DASAFDMLPSAEGTDVEAPSMSANAQGSSTPDANEDDIEKYANLEEGNTESLISPGQVSASGKD
IQSEYTEVVSHVDEGSIEKTNDFQLNGLPFEHNQNLNGDVSTATTQFDHLTLHEGPKLSDDNPA
VIIPDHLQVSNADCAHLTFGSFVSGTLDSSLTTKPLESHGDAAAVPDDDSIDQSDGRIHDDEGK
VTLATDVNEYVTSAANSNEENLDITSVQQSEVTRADFLDVTSNTEYNLTSTPDYATSSAPLQDS
ASQSLQENRQFQNISPFSSFMQMQNGLLPPAIPPLREFDPAFSLLLTHPPMMHGTMSSSMSNTT
VSTQPQETKVNHETRPRPFQKYTYRGYKAVSDRSGRDPTGGFKGPVKKEPEMQAPLNSSALDVK
TSDTTEIFSATINVAQTDAKNTTSQPLSKVQHGWGGIPGRPSMAEIVKMGRPQAKVGSRSVASS
TALPTVGDSVISNTPNLVPEEYNRTVFASEAGHVAADKLPNGAVEVHSLPKDASAFDMLPSAEG
TDVEAPSMSANAQGSSTPDANEDDIEKYANLEEGNTESLISPGQVSASGKDIQSEYTEVVSHVD
EGSIEKTNDFQLNGLPFEHNQNLNGDVSTATTQFDHLTLHEGPKLSDDNPAVIIPDHLQVSNAD
CAHLTFGSFVSGTLDSSLTTKPLESHGDAAAVPDDDSIDQSDGRIHDDEGKVTLATDVNEYVTS
AANSNEENLDITSVQQSEVTRADFLDVTSNTEYNLTSTPDYATSSAPLQDSASQSLQENRQFQN
ISPFSSFMQMQNGLLPPAIPPLREFDPAFSLLLTHPPMMHGTMSSSMSNTTVSTQPQETKVNHE
TRPRPFQKYTYRGYKAVSDRSGRDPTGGFKGPVKKEPEMQAPLNSSALDVKTSDTTEIFSATIN
VAQTDAKNTTSQPLSKVQHGWGGIPGRPSMAEIVKMGRPQAKVGSRSVASSTALPTVGDSVISN
TPNLVPEEYNRTVFASEAGHVAADKLPNGAVEVHSLPKDASAFDMLPSAEGTDVEAPSMSANAQ
GSSTPDANEDDIEKYANLEEGNTESLISPGQVSASGKDIQSEYTEVVSHVDEGSIEKTNDFQLN
GLPFEHNQNLNGDVSTATTQFDHLTLHEGPKLSDDNPAVIIPDHLQVSNADCAHLTFGSFVSGT
LDSSLTTKPLESHGDAAAVPDDDSIDQSDGRIHDDEGKVTLATDVNEYVTSAANSNEENLDITS
VQQSEVTRADFLDVTSNTEYNLTSTPDYATSSAPLQDSASQSLQENRQFQNISPFSSFMQMQNG
LLPPAIPPLREFDPAFSLLLTHPPMMHGTMSSSMSNTTVSTQPQETKVNHETRPRPFQKYTYRG
YKAVSDRSGRDPTGGFKGPVKKEPEMQAPLNSSALDVKTSDTTEIFSATINVAQTDAKNTTSQP
LSKVQHGWGGIPGRPSMAEIVKMGRPQAKVGSRSVASSTALPTVGDSVISNTPNLVPEEYNRTV
FASEAGHVAADKLPNGAVEVHSLPKDASAFDMLPSAEGTDVEAPSMSANAQGSSTPDANEDDIE
KYANLEEGNTESLISPGQVSASGKDIQSEYTEVVSHVDEGSIEKTNDFQLNGLPFEHNQNLNGD
VSTATTQFDHLTLHEGPKLSDDNPAVIIPDHLQVSNADCAHLTFGSFVSGTLDSSLTTKPLESH
GDAAAVPDDDSIDQSDGRIHDDEGKVTLATDVNEYVTSAANSNEENLDITSVQQSEVTRADFLD
VTSNTEYNLTSTPDYATSSAPLQDSASQSLQENRQFQNISPFSSFMQMQNGLLPPAIPPLREFD
PAFSLLLTHPPMMHGTMSSSMSNTTVSTQPQE(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	170949144-170952371(+)
Potential amino acid sequence	MQAPLNSSALDVKTSDTTEIFSATINVAQTDAKNTTSQPLSKVQHGWGGIPGRPSMAEIVKMGR PQAKVGSRSVASSTALPTVGDSVISNTPNLVPEEYNRTVFASEAGHVAADKLPNGAVEVHSLPK DASAFDMLPSAEGTDVEAPSMSANAQGSSTPDANEDDIEKYANLEEGNTESLISPGQVSASGKD IQSEYTEVVSHVDEGSIEKTNDFQLNGLPFEHNQNLNGDVSTATTQFDHLTLHEGPKLSDDNPA VIIPDHLQVSNADCAHLTFGSFVSGTLDSSLTTKPLESHGDAAAVPDDDSIDQSDGRIHDDEGK VTLATDVNEYVTSAANSNEENLDITSVQQSEVTRADFLDVTSNTEYNLTSTPDYATSSAPLQDS ASQSLQENRQFQNISPFSSFMQMQNGLLPPAIPPLREFDPAFSLLLTHPPMMHGTMSSSMSNTT VSTQPQETKVNHETRPRPFQKYTYRGYKAVSDRSGRDPTGGFKGPVKKEPEMQAPLNSSALDVK TSDTTEIFSATINVAQTDAKNTTSQPLSKVQHGWGGIPGRPSMAEIVKMGRPQAKVGSRSVASS TALPTVGDSVISNTPNLVPEEYNRTVFASEAGHVAADKLPNGAVEVHSLPKDASAFDMLPSAEG TDVEAPSMSANAQGSSTPDANEDDIEKYANLEEGNTESLISPGQVSASGKDIQSEYTEVVSHVD EGSIEKTNDFQLNGLPFEHNQNLNGDVSTATTQFDHLTLHEGPKLSDDNPAVIIPDHLQVSNAD CAHLTFGSFVSGTLDSSLTTKPLESHGDAAAVPDDDSIDQSDGRIHDDEGKVTLATDVNEYVTS AANSNEENLDITSVQQSEVTRADFLDVTSNTEYNLTSTPDYATSSAPLQDSASQSLQENRQFQN ISPFSSFMQMQNGLLPPAIPPLREFDPAFSLLLTHPPMMHGTMSSSMSNTTVSTQPQETKVNHE TRPRPFQKYTYRGYKAVSDRSGRDPTGGFKGPVKKEPEMQAPLNSSALDVKTSDTTEIFSATIN VAQTDAKNTTSQPLSKVQHGWGGIPGRPSMAEIVKMGRPQAKVGSRSVASSTALPTVGDSVISN TPNLVPEEYNRTVFASEAGHVAADKLPNGAVEVHSLPKDASAFDMLPSAEGTDVEAPSMSANAQ GSSTPDANEDDIEKYANLEEGNTESLISPGQVSASGKDIQSEYTEVVSHVDEGSIEKTNDFQLN GLPFEHNQNLNGDVSTATTQFDHLTLHEGPKLSDDNPAVIIPDHLQVSNADCAHLTFGSFVSGT LDSSLTTKPLESHGDAAAVPDDDSIDQSDGRIHDDEGKVTLATDVNEYVTSAANSNEENLDITS VQQSEVTRADFLDVTSNTEYNLTSTPDYATSSAPLQDSASQSLQENRQFQNISPFSSFMQMQNG LLPPAIPPLREFDPAFSLLLTHPPMMHGTMSSSMSNTTVSTQPQETKVNHETRPRPFQKYTYRG YKAVSDRSGRDPTGGFKGPVKKEPEMQAPLNSSALDVKTSDTTEIFSATINVAQTDAKNTTSQP LSKVQHGWGGIPGRPSMAEIVKMGRPQAKVGSRSVASSTALPTVGDSVISNTPNLVPEEYNRTV FASEAGHVAADKLPNGAVEVHSLPKDASAFDMLPSAEGTDVEAPSMSANAQGSSTPDANEDDIE KYANLEEGNTESLISPGQVSASGKDIQSEYTEVVSHVDEGSIEKTNDFQLNGLPFEHNQNLNGD VSTATTQFDHLTLHEGPKLSDDNPAVIIPDHLQVSNADCAHLTFGSFVSGTLDSSLTTKPLESH GDAAAVPDDDSIDQSDGRIHDDEGKVTLATDVNEYVTSAANSNEENLDITSVQQSEVTRADFLD VTSNTEYNLTSTPDYATSSAPLQDSASQSLQENRQFQNISPFSSFMQMQNGLLPPAIPPLREFD PAFSLLLTHPPMMHGTMSSSMSNTTVSTQPQE(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d039138_circ_g.2

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